RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 C1orf194Q5T5A4 169 aa17.75■□□□□ 0.43
TMEM260-202ENST00000538838 OR8I2Q8N0Y5 310 aa17.75■□□□□ 0.43
TMEM260-202ENST00000538838 PHYHIPLQ96FC7 376 aa17.75■□□□□ 0.43
TMEM260-202ENST00000538838 FHITP49789 147 aa17.74■□□□□ 0.43
TMEM260-202ENST00000538838 DEFB114Q30KQ6 69 aa17.74■□□□□ 0.43
TMEM260-202ENST00000538838 SSX7Q7RTT5 188 aa17.74■□□□□ 0.43
TMEM260-202ENST00000538838 TECRQ9NZ01 308 aaKnown RBP17.74■□□□□ 0.43
TMEM260-202ENST00000538838 A0A1W2PPV4 95 aa17.73■□□□□ 0.43
TMEM260-202ENST00000538838 UMAD1C9J7I0 102 aa17.73■□□□□ 0.43
TMEM260-202ENST00000538838 HMGB3O15347 200 aaKnown RBP17.73■□□□□ 0.43
TMEM260-202ENST00000538838 ZNF726P1Q15940 193 aa17.73■□□□□ 0.43
TMEM260-202ENST00000538838 CD300EQ496F6 205 aaPredicted RBP17.73■□□□□ 0.43
TMEM260-202ENST00000538838 TCF24Q7RTU0 167 aa17.73■□□□□ 0.43
TMEM260-202ENST00000538838 SLC25A2Q9BXI2 301 aa17.73■□□□□ 0.43
TMEM260-202ENST00000538838 IGLV1-51P01701 117 aa17.72■□□□□ 0.43
TMEM260-202ENST00000538838 SIGLEC15Q6ZMC9 328 aa17.72■□□□□ 0.43
TMEM260-202ENST00000538838 TMEM61Q8N0U2 210 aa17.72■□□□□ 0.43
TMEM260-202ENST00000538838 FAM167A-AS1Q96KT0 104 aa17.72■□□□□ 0.43
TMEM260-202ENST00000538838 ACTR3CQ9C0K3 210 aaPredicted RBP17.72■□□□□ 0.43
TMEM260-202ENST00000538838 IGKV3-7A0A075B6H7 116 aa17.72■□□□□ 0.43
TMEM260-202ENST00000538838 FAM90A2PQ658T7 463 aa17.72■□□□□ 0.43
TMEM260-202ENST00000538838 FAM213BQ8TBF2 198 aa17.72■□□□□ 0.43
TMEM260-202ENST00000538838 RAB24Q969Q5 203 aa17.72■□□□□ 0.43
TMEM260-202ENST00000538838 NOTCH3Q9UM47 2321 aa17.71■□□□□ 0.43
TMEM260-202ENST00000538838 IZUMO1RA6ND01 250 aa17.71■□□□□ 0.43
TMEM260-202ENST00000538838 SULT1A2P50226 295 aa17.71■□□□□ 0.43
TMEM260-202ENST00000538838 INSL3P51460 131 aa17.71■□□□□ 0.43
TMEM260-202ENST00000538838 RPL7P18124 248 aaKnown RBP17.7■□□□□ 0.42
TMEM260-202ENST00000538838 RPL11P62913 178 aaKnown RBP17.7■□□□□ 0.42
TMEM260-202ENST00000538838 RNF24Q9Y225 148 aa17.7■□□□□ 0.42
TMEM260-202ENST00000538838 SMAD5-AS1Q9Y6J3 95 aa17.7■□□□□ 0.42
TMEM260-202ENST00000538838 MRPS12O15235 138 aaKnown RBP17.69■□□□□ 0.42
TMEM260-202ENST00000538838 PYYP10082 97 aa17.69■□□□□ 0.42
TMEM260-202ENST00000538838 GP9P14770 177 aa17.69■□□□□ 0.42
TMEM260-202ENST00000538838 KHDC3LQ587J8 217 aa17.69■□□□□ 0.42
TMEM260-202ENST00000538838 OXLD1Q5BKU9 147 aa17.69■□□□□ 0.42
TMEM260-202ENST00000538838 TEX261Q6UWH6 196 aa17.69■□□□□ 0.42
TMEM260-202ENST00000538838 BPIFA4PQ86YQ2 179 aa17.69■□□□□ 0.42
TMEM260-202ENST00000538838 GPR82Q96P67 336 aa17.69■□□□□ 0.42
TMEM260-202ENST00000538838 CTXND1A0A1B0GTU2 59 aa17.69■□□□□ 0.42
TMEM260-202ENST00000538838 HELTA6NFD8 242 aa17.69■□□□□ 0.42
TMEM260-202ENST00000538838 OR7C2O60412 319 aa17.69■□□□□ 0.42
TMEM260-202ENST00000538838 SNRPCP09234 159 aaKnown RBP17.69■□□□□ 0.42
TMEM260-202ENST00000538838 GALR1P47211 349 aa17.69■□□□□ 0.42
TMEM260-202ENST00000538838 TAS2R45P59539 299 aa17.69■□□□□ 0.42
TMEM260-202ENST00000538838 ZNF503Q96F45 646 aa17.69■□□□□ 0.42
TMEM260-202ENST00000538838 RAB5CP51148 216 aa17.68■□□□□ 0.42
TMEM260-202ENST00000538838 DPPA3Q6W0C5 159 aa17.68■□□□□ 0.42
TMEM260-202ENST00000538838 RBPMS2Q6ZRY4 209 aaKnown RBP17.68■□□□□ 0.42
TMEM260-202ENST00000538838 GBGT1Q8N5D6 347 aa17.68■□□□□ 0.42
TMEM260-202ENST00000538838 STXBP6Q8NFX7 210 aa17.68■□□□□ 0.42
TMEM260-202ENST00000538838 WIPF1O43516 503 aa17.67■□□□□ 0.42
TMEM260-202ENST00000538838 OR10J4P0C629 311 aa17.67■□□□□ 0.42
TMEM260-202ENST00000538838 STAG3L2P0CL84 134 aa17.67■□□□□ 0.42
TMEM260-202ENST00000538838 STAG3L3P0CL85 134 aa17.67■□□□□ 0.42
TMEM260-202ENST00000538838 ARL14EPLP0DKL9 152 aa17.67■□□□□ 0.42
TMEM260-202ENST00000538838 LCN15Q6UWW0 184 aa17.67■□□□□ 0.42
TMEM260-202ENST00000538838 OR2K2Q8NGT1 345 aa17.67■□□□□ 0.42
TMEM260-202ENST00000538838 C17orf77Q96MU5 243 aa17.67■□□□□ 0.42
TMEM260-202ENST00000538838 TMEM14CQ9P0S9 112 aa17.67■□□□□ 0.42
TMEM260-202ENST00000538838 ATF4P18848 351 aaPredicted RBP17.66■□□□□ 0.42
TMEM260-202ENST00000538838 LCN12Q6JVE5 192 aa17.66■□□□□ 0.42
TMEM260-202ENST00000538838 ZNF680Q8NEM1 530 aa17.66■□□□□ 0.42
TMEM260-202ENST00000538838 PAXXQ9BUH6 204 aa17.66■□□□□ 0.42
TMEM260-202ENST00000538838 GPR61Q9BZJ8 451 aa17.66■□□□□ 0.42
TMEM260-202ENST00000538838 OR51M1Q9H341 326 aa17.66■□□□□ 0.42
TMEM260-202ENST00000538838 MAP1LC3B2A6NCE7 125 aa17.65■□□□□ 0.42
TMEM260-202ENST00000538838 ZNF785A8K8V0 405 aa17.65■□□□□ 0.42
TMEM260-202ENST00000538838 H3BTX0 84 aa17.65■□□□□ 0.42
TMEM260-202ENST00000538838 TSPAN4O14817 238 aa17.65■□□□□ 0.42
TMEM260-202ENST00000538838 CD5P06127 495 aa17.65■□□□□ 0.42
TMEM260-202ENST00000538838 IGLC2P0DOY2 106 aa17.65■□□□□ 0.42
TMEM260-202ENST00000538838 TFPI2P48307 235 aa17.65■□□□□ 0.42
TMEM260-202ENST00000538838 FGF8P55075 233 aaPredicted RBP17.65■□□□□ 0.42
TMEM260-202ENST00000538838 MAP1LC3BQ9GZQ8 125 aa17.65■□□□□ 0.42
TMEM260-202ENST00000538838 MS4A6AQ9H2W1 248 aa17.65■□□□□ 0.42
TMEM260-202ENST00000538838 NRN1Q9NPD7 142 aa17.65■□□□□ 0.42
TMEM260-202ENST00000538838 TRAV25A0A0B4J276 109 aa17.65■□□□□ 0.42
TMEM260-202ENST00000538838 H3BQ15 152 aa17.65■□□□□ 0.42
TMEM260-202ENST00000538838 UBE2L3P68036 154 aaKnown RBP17.65■□□□□ 0.42
TMEM260-202ENST00000538838 GUCA2BQ16661 112 aa17.65■□□□□ 0.42
TMEM260-202ENST00000538838 PQLC2Q6ZP29 291 aa17.65■□□□□ 0.42
TMEM260-202ENST00000538838 RNF141Q8WVD5 230 aa17.65■□□□□ 0.42
TMEM260-202ENST00000538838 FXYD5Q96DB9 178 aa17.65■□□□□ 0.42
TMEM260-202ENST00000538838 ZNF705EA8MWA4 302 aaPredicted RBP17.64■□□□□ 0.41
TMEM260-202ENST00000538838 G3V4G9 280 aa17.64■□□□□ 0.41
TMEM260-202ENST00000538838 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.64■□□□□ 0.41
TMEM260-202ENST00000538838 WFDC3Q8IUB2 231 aa17.64■□□□□ 0.41
TMEM260-202ENST00000538838 A0A087X0K7 114 aa17.63■□□□□ 0.41
TMEM260-202ENST00000538838 A0A1B0GV50 99 aa17.63■□□□□ 0.41
TMEM260-202ENST00000538838 SFT2D1Q8WV19 159 aa17.63■□□□□ 0.41
TMEM260-202ENST00000538838 ZNF586Q9NXT0 402 aa17.63■□□□□ 0.41
TMEM260-202ENST00000538838 CXorf1O96002 111 aa17.62■□□□□ 0.41
TMEM260-202ENST00000538838 IFNA7P01567 189 aa17.62■□□□□ 0.41
TMEM260-202ENST00000538838 H2AFB1P0C5Y9 115 aa17.62■□□□□ 0.41
TMEM260-202ENST00000538838 IQCF2Q8IXL9 164 aa17.62■□□□□ 0.41
TMEM260-202ENST00000538838 DCANP1Q8TF63 244 aa17.62■□□□□ 0.41
TMEM260-202ENST00000538838 SPAG8Q99932 426 aaPredicted RBP17.62■□□□□ 0.41
TMEM260-202ENST00000538838 HRH4Q9H3N8 390 aa17.62■□□□□ 0.41
TMEM260-202ENST00000538838 DNASE2O00115 360 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms