RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 LINC00305Q7Z4B0 112 aa13.18□□□□□ -0.3
CLN6-202ENST00000538696 Q8WTZ3 238 aa13.18□□□□□ -0.3
CLN6-202ENST00000538696 DPF1Q92782 380 aa13.18□□□□□ -0.3
CLN6-202ENST00000538696 RNF125Q96EQ8 232 aa13.18□□□□□ -0.3
CLN6-202ENST00000538696 MRPL27Q9P0M9 148 aaKnown RBP13.18□□□□□ -0.3
CLN6-202ENST00000538696 IGHV3-35A0A0C4DH35 117 aa13.17□□□□□ -0.3
CLN6-202ENST00000538696 OR2C1O95371 312 aa13.17□□□□□ -0.3
CLN6-202ENST00000538696 PSMB3P49720 205 aa13.17□□□□□ -0.3
CLN6-202ENST00000538696 PPT1P50897 306 aa13.17□□□□□ -0.3
CLN6-202ENST00000538696 USF2Q15853 346 aaPredicted RBP13.17□□□□□ -0.3
CLN6-202ENST00000538696 ZNF600Q6ZNG1 722 aa13.17□□□□□ -0.3
CLN6-202ENST00000538696 MANBALQ9NQG1 85 aa13.17□□□□□ -0.3
CLN6-202ENST00000538696 PUS1Q9Y606 427 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLN6-202ENST00000538696 DNHD1Q96M86 4753 aa13.17□□□□□ -0.3
CLN6-202ENST00000538696 KRBOX1C9JBD0 128 aa13.16□□□□□ -0.3
CLN6-202ENST00000538696 OR7C2O60412 319 aa13.16□□□□□ -0.3
CLN6-202ENST00000538696 PF4P02776 101 aa13.16□□□□□ -0.3
CLN6-202ENST00000538696 SRP19P09132 144 aaKnown RBP13.16□□□□□ -0.3
CLN6-202ENST00000538696 SFTA3P0C7M3 94 aa13.16□□□□□ -0.3
CLN6-202ENST00000538696 ADCYAP1P18509 176 aa13.16□□□□□ -0.3
CLN6-202ENST00000538696 UBE2G2P60604 165 aa13.16□□□□□ -0.3
CLN6-202ENST00000538696 RPEL1Q2QD12 228 aa13.16□□□□□ -0.3
CLN6-202ENST00000538696 PQLC2Q6ZP29 291 aa13.16□□□□□ -0.3
CLN6-202ENST00000538696 SLC25A39Q9BZJ4 359 aaPredicted RBP13.16□□□□□ -0.3
CLN6-202ENST00000538696 H3BRN7 92 aa13.15□□□□□ -0.3
CLN6-202ENST00000538696 PAGE4O60829 102 aa13.15□□□□□ -0.3
CLN6-202ENST00000538696 LEMD1Q68G75 181 aa13.15□□□□□ -0.3
CLN6-202ENST00000538696 TOMM20LQ6UXN7 152 aa13.15□□□□□ -0.3
CLN6-202ENST00000538696 LINC00482Q8N8I6 264 aa13.15□□□□□ -0.3
CLN6-202ENST00000538696 SHANK2-AS3Q9BTD1 123 aa13.15□□□□□ -0.3
CLN6-202ENST00000538696 ZFAND3Q9H8U3 227 aa13.15□□□□□ -0.3
CLN6-202ENST00000538696 VAX2Q9UIW0 290 aa13.15□□□□□ -0.3
CLN6-202ENST00000538696 IGHV3OR16-8A0A075B7F1 116 aa13.14□□□□□ -0.31
CLN6-202ENST00000538696 OR10J4P0C629 311 aa13.14□□□□□ -0.31
CLN6-202ENST00000538696 PYYP10082 97 aa13.14□□□□□ -0.31
CLN6-202ENST00000538696 UBE2L3P68036 154 aaKnown RBP13.14□□□□□ -0.31
CLN6-202ENST00000538696 KLF5Q13887 457 aaPredicted RBP13.14□□□□□ -0.31
CLN6-202ENST00000538696 DLX4Q92988 240 aaPredicted RBP13.14□□□□□ -0.31
CLN6-202ENST00000538696 PAXXQ9BUH6 204 aa13.14□□□□□ -0.31
CLN6-202ENST00000538696 SYNJ2BPP57105 145 aa13.13□□□□□ -0.31
CLN6-202ENST00000538696 RELQ04864 619 aaPredicted RBP13.13□□□□□ -0.31
CLN6-202ENST00000538696 UNQ9165/PRO28630Q6UXU0 137 aa13.13□□□□□ -0.31
CLN6-202ENST00000538696 GPHB5Q86YW7 130 aa13.13□□□□□ -0.31
CLN6-202ENST00000538696 C1QL4Q86Z23 238 aa13.13□□□□□ -0.31
CLN6-202ENST00000538696 OR51M1Q9H341 326 aa13.13□□□□□ -0.31
CLN6-202ENST00000538696 SMDT1Q9H4I9 107 aa13.13□□□□□ -0.31
CLN6-202ENST00000538696 TMEM167BQ9NRX6 74 aa13.13□□□□□ -0.31
CLN6-202ENST00000538696 YTHDF2Q9Y5A9 579 aaKnown RBP13.13□□□□□ -0.31
CLN6-202ENST00000538696 F8W036 122 aa13.13□□□□□ -0.31
CLN6-202ENST00000538696 NDUFA4O00483 81 aa13.13□□□□□ -0.31
CLN6-202ENST00000538696 GP9P14770 177 aa13.13□□□□□ -0.31
CLN6-202ENST00000538696 TAGLN2P37802 199 aaKnown RBP13.13□□□□□ -0.31
CLN6-202ENST00000538696 ATP5G3P48201 142 aa13.13□□□□□ -0.31
CLN6-202ENST00000538696 CD81P60033 236 aa13.13□□□□□ -0.31
CLN6-202ENST00000538696 MEF2BQ02080 365 aaPredicted RBP13.13□□□□□ -0.31
CLN6-202ENST00000538696 REC114Q7Z4M0 266 aa13.13□□□□□ -0.31
CLN6-202ENST00000538696 SUN5Q8TC36 379 aa13.13□□□□□ -0.31
CLN6-202ENST00000538696 TMEM190Q8WZ59 177 aa13.13□□□□□ -0.31
CLN6-202ENST00000538696 FXYD5Q96DB9 178 aa13.13□□□□□ -0.31
CLN6-202ENST00000538696 SLC35B3Q9H1N7 401 aa13.13□□□□□ -0.31
CLN6-202ENST00000538696 FAM74A7A6NL05 159 aa13.12□□□□□ -0.31
CLN6-202ENST00000538696 C10orf91Q5T1B1 145 aa13.12□□□□□ -0.31
CLN6-202ENST00000538696 CST9LP1Q5W188 147 aa13.12□□□□□ -0.31
CLN6-202ENST00000538696 CYB561D1Q8N8Q1 229 aa13.12□□□□□ -0.31
CLN6-202ENST00000538696 RABAC1Q9UI14 185 aa13.12□□□□□ -0.31
CLN6-202ENST00000538696 ZNF98A6NK75 572 aa13.11□□□□□ -0.31
CLN6-202ENST00000538696 C11orf94C9JXX5 98 aa13.11□□□□□ -0.31
CLN6-202ENST00000538696 OVOL1O14753 267 aa13.11□□□□□ -0.31
CLN6-202ENST00000538696 SNRPCP09234 159 aaKnown RBP13.11□□□□□ -0.31
CLN6-202ENST00000538696 FAM106AQ4KMX7 169 aa13.11□□□□□ -0.31
CLN6-202ENST00000538696 SEC11CQ9BY50 192 aa13.11□□□□□ -0.31
CLN6-202ENST00000538696 CARHSP1Q9Y2V2 147 aaKnown RBP13.11□□□□□ -0.31
CLN6-202ENST00000538696 LGALS9O00182 355 aa13.1□□□□□ -0.31
CLN6-202ENST00000538696 EDN2P20800 178 aa13.1□□□□□ -0.31
CLN6-202ENST00000538696 CEBPGP53567 150 aa13.1□□□□□ -0.31
CLN6-202ENST00000538696 STXBP6Q8NFX7 210 aa13.1□□□□□ -0.31
CLN6-202ENST00000538696 TMEM14CQ9P0S9 112 aa13.1□□□□□ -0.31
CLN6-202ENST00000538696 ZNF320A2RRD8 509 aa13.09□□□□□ -0.31
CLN6-202ENST00000538696 A8MWP6 167 aa13.09□□□□□ -0.31
CLN6-202ENST00000538696 H3BTX0 84 aa13.09□□□□□ -0.31
CLN6-202ENST00000538696 ZNF207O43670 478 aaKnown RBP13.09□□□□□ -0.31
CLN6-202ENST00000538696 APOC3P02656 99 aa13.09□□□□□ -0.31
CLN6-202ENST00000538696 GUCA2BQ16661 112 aa13.09□□□□□ -0.31
CLN6-202ENST00000538696 FAM90A2PQ658T7 463 aa13.09□□□□□ -0.31
CLN6-202ENST00000538696 OR9G4Q8NGQ1 327 aa13.09□□□□□ -0.31
CLN6-202ENST00000538696 C20orf24Q9BUV8 137 aa13.09□□□□□ -0.31
CLN6-202ENST00000538696 ARL2-SNX15V9GYD0 113 aa13.09□□□□□ -0.31
CLN6-202ENST00000538696 TRRAPQ9Y4A5 3859 aa13.08□□□□□ -0.32
CLN6-202ENST00000538696 TMEM213A2RRL7 107 aa13.08□□□□□ -0.32
CLN6-202ENST00000538696 MRPS12O15235 138 aaKnown RBP13.08□□□□□ -0.32
CLN6-202ENST00000538696 NDUFS6O75380 124 aaKnown RBP13.08□□□□□ -0.32
CLN6-202ENST00000538696 SOHLH1Q5JUK2 328 aa13.08□□□□□ -0.32
CLN6-202ENST00000538696 PRR31Q5SQ13 230 aa13.08□□□□□ -0.32
CLN6-202ENST00000538696 S100A7AQ86SG5 101 aa13.08□□□□□ -0.32
CLN6-202ENST00000538696 BLNKQ8WV28 456 aa13.08□□□□□ -0.32
CLN6-202ENST00000538696 CMYA5Q8N3K9 4069 aa13.07□□□□□ -0.32
CLN6-202ENST00000538696 VWFP04275 2813 aa13.07□□□□□ -0.32
CLN6-202ENST00000538696 GGTLC3B5MD39 225 aa13.07□□□□□ -0.32
CLN6-202ENST00000538696 H3BQ15 152 aa13.07□□□□□ -0.32
CLN6-202ENST00000538696 CD33P20138 364 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms