RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 ZNF138P52744 262 aa6.9□□□□□ -1.3
UBE3B-208ENST00000538070 SSX8Q7RTT4 187 aa6.9□□□□□ -1.3
UBE3B-208ENST00000538070 C8orf46Q8TAG6 207 aa6.9□□□□□ -1.3
UBE3B-208ENST00000538070 ZNF586Q9NXT0 402 aa6.9□□□□□ -1.3
UBE3B-208ENST00000538070 TP53TG3Q9ULZ0 132 aa6.9□□□□□ -1.3
UBE3B-208ENST00000538070 NAV2Q8IVL1 2488 aa6.9□□□□□ -1.31
UBE3B-208ENST00000538070 SERTM2A0A1B0GWG4 89 aa6.9□□□□□ -1.31
UBE3B-208ENST00000538070 C19orf84I3L1E1 186 aa6.9□□□□□ -1.31
UBE3B-208ENST00000538070 IGKV1-17P01599 117 aa6.9□□□□□ -1.31
UBE3B-208ENST00000538070 NDPQ00604 133 aa6.9□□□□□ -1.31
UBE3B-208ENST00000538070 BRD3OSQ6XYD6 125 aa6.9□□□□□ -1.31
UBE3B-208ENST00000538070 TMEM136Q6ZRR5 245 aa6.9□□□□□ -1.31
UBE3B-208ENST00000538070 TRGV9Q99603 122 aa6.9□□□□□ -1.31
UBE3B-208ENST00000538070 J3KRW8 73 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 HIST1H1EP10412 219 aaKnown RBP6.89□□□□□ -1.31
UBE3B-208ENST00000538070 LCN12Q6JVE5 192 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 THAP8Q8NA92 274 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 BEND2Q8NDZ0 799 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 ARPC1AQ92747 370 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 IGF2BP2-AS1Q96M15 143 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 CHODLQ9H9P2 273 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 BMPR1BO00238 502 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 CHEK1O14757 476 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 BRS3P32247 399 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 GPR183P32249 361 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 TCTAP57738 103 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 LY6EQ16553 131 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 C5orf64Q2M2E5 130 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 FAM71F2Q6NXP2 309 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 WDR73Q6P4I2 378 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 UNQ5815/PRO19632Q6UWF5 114 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 TMEM116Q8NCL8 245 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 STXBP6Q8NFX7 210 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 RNF125Q96EQ8 232 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 GPR82Q96P67 336 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 MCRIP2Q9BUT9 160 aaKnown RBP6.89□□□□□ -1.31
UBE3B-208ENST00000538070 IGSF10Q6WRI0 2623 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 VPS13CQ709C8 3753 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 NDUFB8O95169 186 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 TCRAP04437 139 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 TAS2R60P59551 318 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 YPEL3P61236 119 aaPredicted RBP6.89□□□□□ -1.31
UBE3B-208ENST00000538070 BPIFA4PQ86YQ2 179 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 C5orf17Q8NAS9 161 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 TNFRSF14Q92956 283 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 BORCS7Q96B45 105 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 RNF114Q9Y508 228 aa6.89□□□□□ -1.31
UBE3B-208ENST00000538070 CELSR2Q9HCU4 2923 aa6.88□□□□□ -1.31
UBE3B-208ENST00000538070 IZUMO1RA6ND01 250 aa6.88□□□□□ -1.31
UBE3B-208ENST00000538070 DIRC3C9JPN6 131 aa6.88□□□□□ -1.31
UBE3B-208ENST00000538070 G3V318 75 aa6.88□□□□□ -1.31
UBE3B-208ENST00000538070 K7EIM0 57 aa6.88□□□□□ -1.31
UBE3B-208ENST00000538070 POLR3KQ9Y2Y1 108 aaPredicted RBP6.88□□□□□ -1.31
UBE3B-208ENST00000538070 I3L2K1 104 aa6.88□□□□□ -1.31
UBE3B-208ENST00000538070 HLA-DMBP28068 263 aa6.88□□□□□ -1.31
UBE3B-208ENST00000538070 CTAG1AP78358 180 aa6.88□□□□□ -1.31
UBE3B-208ENST00000538070 Q8TAT8 98 aa6.88□□□□□ -1.31
UBE3B-208ENST00000538070 VAMP8Q9BV40 100 aa6.88□□□□□ -1.31
UBE3B-208ENST00000538070 NRN1Q9NPD7 142 aa6.88□□□□□ -1.31
UBE3B-208ENST00000538070 FBXL7Q9UJT9 491 aa6.88□□□□□ -1.31
UBE3B-208ENST00000538070 HLA-DRB1P01911 266 aa6.88□□□□□ -1.31
UBE3B-208ENST00000538070 PRTN3P24158 256 aa6.88□□□□□ -1.31
UBE3B-208ENST00000538070 GDF5OSQ5U4N7 250 aa6.88□□□□□ -1.31
UBE3B-208ENST00000538070 GNB1LQ9BYB4 327 aa6.88□□□□□ -1.31
UBE3B-208ENST00000538070 ZANQ9Y493 2812 aa6.88□□□□□ -1.31
UBE3B-208ENST00000538070 IGKV2-40A0A087WW87 121 aaPredicted RBP6.87□□□□□ -1.31
UBE3B-208ENST00000538070 LINC01548A6NM66 108 aa6.87□□□□□ -1.31
UBE3B-208ENST00000538070 M0R2Z0 102 aa6.87□□□□□ -1.31
UBE3B-208ENST00000538070 IGKV2D-40P01614 121 aaPredicted RBP6.87□□□□□ -1.31
UBE3B-208ENST00000538070 CRYGBP07316 175 aa6.87□□□□□ -1.31
UBE3B-208ENST00000538070 GP9P14770 177 aa6.87□□□□□ -1.31
UBE3B-208ENST00000538070 LINC00310P59036 64 aa6.87□□□□□ -1.31
UBE3B-208ENST00000538070 GRAMD2BQ96HH9 432 aa6.87□□□□□ -1.31
UBE3B-208ENST00000538070 CLEC5AQ9NY25 188 aa6.87□□□□□ -1.31
UBE3B-208ENST00000538070 C21orf62Q9NYP8 219 aa6.87□□□□□ -1.31
UBE3B-208ENST00000538070 ZNF785A8K8V0 405 aa6.87□□□□□ -1.31
UBE3B-208ENST00000538070 HLA-DQA1P01909 254 aa6.87□□□□□ -1.31
UBE3B-208ENST00000538070 MFAP4P55083 255 aa6.87□□□□□ -1.31
UBE3B-208ENST00000538070 COA6Q5JTJ3 125 aaKnown RBP6.87□□□□□ -1.31
UBE3B-208ENST00000538070 C8orf31Q8N9H6 132 aa6.87□□□□□ -1.31
UBE3B-208ENST00000538070 NEU4Q8WWR8 484 aaPredicted RBP6.87□□□□□ -1.31
UBE3B-208ENST00000538070 NRGNQ92686 78 aa6.87□□□□□ -1.31
UBE3B-208ENST00000538070 RPP21Q9H633 154 aaKnown RBP6.87□□□□□ -1.31
UBE3B-208ENST00000538070 SOX21Q9Y651 276 aaPredicted RBP6.87□□□□□ -1.31
UBE3B-208ENST00000538070 ARL2-SNX15V9GYD0 113 aa6.87□□□□□ -1.31
UBE3B-208ENST00000538070 LOC389332A0A1B0GUA5 103 aa6.87□□□□□ -1.31
UBE3B-208ENST00000538070 SAA4P35542 130 aa6.87□□□□□ -1.31
UBE3B-208ENST00000538070 REC114Q7Z4M0 266 aa6.87□□□□□ -1.31
UBE3B-208ENST00000538070 A0A1W2PS18 150 aa6.86□□□□□ -1.31
UBE3B-208ENST00000538070 A8MWL6 223 aa6.86□□□□□ -1.31
UBE3B-208ENST00000538070 EREGO14944 169 aa6.86□□□□□ -1.31
UBE3B-208ENST00000538070 CRYGCP07315 174 aa6.86□□□□□ -1.31
UBE3B-208ENST00000538070 PDLIM4P50479 330 aa6.86□□□□□ -1.31
UBE3B-208ENST00000538070 TMEM183BQ1AE95 376 aa6.86□□□□□ -1.31
UBE3B-208ENST00000538070 CLEC19AQ6UXS0 136 aa6.86□□□□□ -1.31
UBE3B-208ENST00000538070 C8orf49Q96NF6 230 aa6.86□□□□□ -1.31
UBE3B-208ENST00000538070 PMCHL2Q9BQD1 86 aa6.86□□□□□ -1.31
UBE3B-208ENST00000538070 CHRDL1Q9BU40 450 aa6.86□□□□□ -1.31
UBE3B-208ENST00000538070 AAMDCQ9H7C9 122 aa6.86□□□□□ -1.31
UBE3B-208ENST00000538070 LY96Q9Y6Y9 160 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms