RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 RHOBP62745 196 aa18.3■□□□□ 0.52
HMGA2-208ENST00000537429 FAM90A2PQ658T7 463 aa18.3■□□□□ 0.52
HMGA2-208ENST00000537429 MIR17HGQ75NE6 70 aa18.3■□□□□ 0.52
HMGA2-208ENST00000537429 PHYHIPLQ96FC7 376 aa18.3■□□□□ 0.52
HMGA2-208ENST00000537429 TRAV5A0A0B4J249 113 aa18.29■□□□□ 0.52
HMGA2-208ENST00000537429 UMAD1C9J7I0 102 aa18.29■□□□□ 0.52
HMGA2-208ENST00000537429 OR8I2Q8N0Y5 310 aa18.29■□□□□ 0.52
HMGA2-208ENST00000537429 A0A1W2PPV4 95 aa18.28■□□□□ 0.52
HMGA2-208ENST00000537429 WIPF1O43516 503 aa18.28■□□□□ 0.52
HMGA2-208ENST00000537429 CD300EQ496F6 205 aaPredicted RBP18.28■□□□□ 0.52
HMGA2-208ENST00000537429 FAM122CQ6P4D5 195 aa18.28■□□□□ 0.52
HMGA2-208ENST00000537429 GPR61Q9BZJ8 451 aa18.28■□□□□ 0.52
HMGA2-208ENST00000537429 CD5P06127 495 aa18.28■□□□□ 0.52
HMGA2-208ENST00000537429 OXLD1Q5BKU9 147 aa18.28■□□□□ 0.52
HMGA2-208ENST00000537429 TCF24Q7RTU0 167 aa18.28■□□□□ 0.52
HMGA2-208ENST00000537429 CDC34P49427 236 aaPredicted RBP18.27■□□□□ 0.51
HMGA2-208ENST00000537429 RPL11P62913 178 aaKnown RBP18.27■□□□□ 0.51
HMGA2-208ENST00000537429 SIGLEC15Q6ZMC9 328 aa18.27■□□□□ 0.51
HMGA2-208ENST00000537429 TMEM61Q8N0U2 210 aa18.27■□□□□ 0.51
HMGA2-208ENST00000537429 FAM167A-AS1Q96KT0 104 aa18.27■□□□□ 0.51
HMGA2-208ENST00000537429 GPR82Q96P67 336 aa18.27■□□□□ 0.51
HMGA2-208ENST00000537429 MRPS12O15235 138 aaKnown RBP18.26■□□□□ 0.51
HMGA2-208ENST00000537429 RPL7P18124 248 aaKnown RBP18.26■□□□□ 0.51
HMGA2-208ENST00000537429 OR2K2Q8NGT1 345 aa18.26■□□□□ 0.51
HMGA2-208ENST00000537429 SLC25A2Q9BXI2 301 aa18.26■□□□□ 0.51
HMGA2-208ENST00000537429 ACTR3CQ9C0K3 210 aaPredicted RBP18.26■□□□□ 0.51
HMGA2-208ENST00000537429 HELTA6NFD8 242 aa18.25■□□□□ 0.51
HMGA2-208ENST00000537429 EIF3GO75821 320 aaKnown RBP eCLIP18.25■□□□□ 0.51
HMGA2-208ENST00000537429 SULT1A2P50226 295 aa18.25■□□□□ 0.51
HMGA2-208ENST00000537429 ZNF726P1Q15940 193 aa18.25■□□□□ 0.51
HMGA2-208ENST00000537429 ALKAL2Q6UX46 152 aa18.25■□□□□ 0.51
HMGA2-208ENST00000537429 RBPMS2Q6ZRY4 209 aaKnown RBP18.25■□□□□ 0.51
HMGA2-208ENST00000537429 BPIFA4PQ86YQ2 179 aa18.25■□□□□ 0.51
HMGA2-208ENST00000537429 RAB24Q969Q5 203 aa18.25■□□□□ 0.51
HMGA2-208ENST00000537429 SMAD5-AS1Q9Y6J3 95 aa18.25■□□□□ 0.51
HMGA2-208ENST00000537429 TRAV25A0A0B4J276 109 aa18.24■□□□□ 0.51
HMGA2-208ENST00000537429 IZUMO1RA6ND01 250 aa18.24■□□□□ 0.51
HMGA2-208ENST00000537429 FHITP49789 147 aa18.24■□□□□ 0.51
HMGA2-208ENST00000537429 RAB5CP51148 216 aa18.24■□□□□ 0.51
HMGA2-208ENST00000537429 IGKV3-7A0A075B6H7 116 aa18.23■□□□□ 0.51
HMGA2-208ENST00000537429 TSPAN4O14817 238 aa18.23■□□□□ 0.51
HMGA2-208ENST00000537429 TAS2R45P59539 299 aa18.23■□□□□ 0.51
HMGA2-208ENST00000537429 DPPA3Q6W0C5 159 aa18.23■□□□□ 0.51
HMGA2-208ENST00000537429 SSX7Q7RTT5 188 aa18.23■□□□□ 0.51
HMGA2-208ENST00000537429 TMEM14CQ9P0S9 112 aa18.23■□□□□ 0.51
HMGA2-208ENST00000537429 GP9P14770 177 aa18.23■□□□□ 0.51
HMGA2-208ENST00000537429 GALR1P47211 349 aa18.23■□□□□ 0.51
HMGA2-208ENST00000537429 KHDC3LQ587J8 217 aa18.23■□□□□ 0.51
HMGA2-208ENST00000537429 FAM74A1Q5RGS3 127 aa18.23■□□□□ 0.51
HMGA2-208ENST00000537429 TEX261Q6UWH6 196 aa18.23■□□□□ 0.51
HMGA2-208ENST00000537429 CTXND1A0A1B0GTU2 59 aa18.22■□□□□ 0.51
HMGA2-208ENST00000537429 G3V4G9 280 aa18.22■□□□□ 0.51
HMGA2-208ENST00000537429 HMGB3O15347 200 aaKnown RBP18.22■□□□□ 0.51
HMGA2-208ENST00000537429 STAG3L2P0CL84 134 aa18.22■□□□□ 0.51
HMGA2-208ENST00000537429 STAG3L3P0CL85 134 aa18.22■□□□□ 0.51
HMGA2-208ENST00000537429 LCN12Q6JVE5 192 aa18.22■□□□□ 0.51
HMGA2-208ENST00000537429 STXBP6Q8NFX7 210 aa18.22■□□□□ 0.51
HMGA2-208ENST00000537429 FAM213BQ8TBF2 198 aa18.22■□□□□ 0.51
HMGA2-208ENST00000537429 ZNF503Q96F45 646 aa18.22■□□□□ 0.51
HMGA2-208ENST00000537429 C17orf77Q96MU5 243 aa18.22■□□□□ 0.51
HMGA2-208ENST00000537429 IGLC2P0DOY2 106 aa18.21■□□□□ 0.51
HMGA2-208ENST00000537429 GUCA2BQ16661 112 aa18.21■□□□□ 0.51
HMGA2-208ENST00000537429 OR51M1Q9H341 326 aa18.21■□□□□ 0.51
HMGA2-208ENST00000537429 ZNF785A8K8V0 405 aa18.2■□□□□ 0.5
HMGA2-208ENST00000537429 OR7C2O60412 319 aa18.2■□□□□ 0.5
HMGA2-208ENST00000537429 PYYP10082 97 aa18.2■□□□□ 0.5
HMGA2-208ENST00000537429 PQLC2Q6ZP29 291 aa18.2■□□□□ 0.5
HMGA2-208ENST00000537429 GBGT1Q8N5D6 347 aa18.2■□□□□ 0.5
HMGA2-208ENST00000537429 SPAG8Q99932 426 aaPredicted RBP18.2■□□□□ 0.5
HMGA2-208ENST00000537429 MS4A6AQ9H2W1 248 aa18.2■□□□□ 0.5
HMGA2-208ENST00000537429 NRN1Q9NPD7 142 aa18.2■□□□□ 0.5
HMGA2-208ENST00000537429 A0A087X0K7 114 aa18.19■□□□□ 0.5
HMGA2-208ENST00000537429 SAMD5Q5TGI4 173 aa18.19■□□□□ 0.5
HMGA2-208ENST00000537429 RNF141Q8WVD5 230 aa18.19■□□□□ 0.5
HMGA2-208ENST00000537429 PAXXQ9BUH6 204 aa18.19■□□□□ 0.5
HMGA2-208ENST00000537429 HRH4Q9H3N8 390 aa18.19■□□□□ 0.5
HMGA2-208ENST00000537429 H3BQ15 152 aa18.18■□□□□ 0.5
HMGA2-208ENST00000537429 ARL14EPLP0DKL9 152 aa18.18■□□□□ 0.5
HMGA2-208ENST00000537429 ATF4P18848 351 aaPredicted RBP18.18■□□□□ 0.5
HMGA2-208ENST00000537429 PAFAH1B2P68402 229 aa18.18■□□□□ 0.5
HMGA2-208ENST00000537429 ZNF680Q8NEM1 530 aa18.18■□□□□ 0.5
HMGA2-208ENST00000537429 DCANP1Q8TF63 244 aa18.18■□□□□ 0.5
HMGA2-208ENST00000537429 MBD3L1Q8WWY6 194 aa18.18■□□□□ 0.5
HMGA2-208ENST00000537429 DNASE2O00115 360 aaPredicted RBP18.18■□□□□ 0.5
HMGA2-208ENST00000537429 SNRPCP09234 159 aaKnown RBP18.18■□□□□ 0.5
HMGA2-208ENST00000537429 HIST1H1EP10412 219 aaKnown RBP18.18■□□□□ 0.5
HMGA2-208ENST00000537429 TFPI2P48307 235 aa18.18■□□□□ 0.5
HMGA2-208ENST00000537429 LCN15Q6UWW0 184 aa18.18■□□□□ 0.5
HMGA2-208ENST00000537429 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.18■□□□□ 0.5
HMGA2-208ENST00000537429 FXYD5Q96DB9 178 aa18.18■□□□□ 0.5
HMGA2-208ENST00000537429 ZNF586Q9NXT0 402 aa18.18■□□□□ 0.5
HMGA2-208ENST00000537429 ZNF256Q9Y2P7 627 aaPredicted RBP18.18■□□□□ 0.5
HMGA2-208ENST00000537429 TRAV2A0A0B4J234 112 aa18.17■□□□□ 0.5
HMGA2-208ENST00000537429 MAP1LC3B2A6NCE7 125 aa18.17■□□□□ 0.5
HMGA2-208ENST00000537429 CXorf1O96002 111 aa18.17■□□□□ 0.5
HMGA2-208ENST00000537429 OR10J4P0C629 311 aa18.17■□□□□ 0.5
HMGA2-208ENST00000537429 WFDC3Q8IUB2 231 aa18.17■□□□□ 0.5
HMGA2-208ENST00000537429 MAP1LC3BQ9GZQ8 125 aa18.17■□□□□ 0.5
HMGA2-208ENST00000537429 MGAM2Q2M2H8 2515 aa18.17■□□□□ 0.5
HMGA2-208ENST00000537429 MEOX2P50222 304 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms