RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 VPREB3Q9UKI3 123 aa8.82□□□□□ -1
CLSTN3-207ENST00000537408 TMEM131Q92545 1883 aa8.82□□□□□ -1
CLSTN3-207ENST00000537408 PPIFP30405 207 aaKnown RBP8.81□□□□□ -1
CLSTN3-207ENST00000537408 ATP5J2P56134 94 aa8.81□□□□□ -1
CLSTN3-207ENST00000537408 MRPL32Q9BYC8 188 aaKnown RBP8.81□□□□□ -1
CLSTN3-207ENST00000537408 PCDH15Q96QU1 1955 aa8.81□□□□□ -1
CLSTN3-207ENST00000537408 M0QXV9 152 aa8.81□□□□□ -1
CLSTN3-207ENST00000537408 ZNF688P0C7X2 276 aa8.81□□□□□ -1
CLSTN3-207ENST00000537408 C12orf74Q32Q52 190 aa8.81□□□□□ -1
CLSTN3-207ENST00000537408 SLC25A53Q5H9E4 307 aa8.81□□□□□ -1
CLSTN3-207ENST00000537408 LSM4Q9Y4Z0 139 aaKnown RBP8.81□□□□□ -1
CLSTN3-207ENST00000537408 ATP5IP56385 69 aaPredicted RBP8.81□□□□□ -1
CLSTN3-207ENST00000537408 SRSF1Q07955 248 aaKnown RBP eCLIP8.81□□□□□ -1
CLSTN3-207ENST00000537408 OR5AN1Q8NGI8 311 aa8.81□□□□□ -1
CLSTN3-207ENST00000537408 GLMPQ8WWB7 406 aa8.81□□□□□ -1
CLSTN3-207ENST00000537408 TIMD4Q96H15 378 aa8.81□□□□□ -1
CLSTN3-207ENST00000537408 HIST1H4GQ99525 98 aa8.81□□□□□ -1
CLSTN3-207ENST00000537408 TLN1Q9Y490 2541 aaKnown RBP8.81□□□□□ -1
CLSTN3-207ENST00000537408 TRAV24A0A0B4J272 114 aa8.8□□□□□ -1
CLSTN3-207ENST00000537408 FAM90A9PA6NNJ1 464 aa8.8□□□□□ -1
CLSTN3-207ENST00000537408 MUC22E2RYF6 1773 aaPredicted RBP8.8□□□□□ -1
CLSTN3-207ENST00000537408 HBDP02042 147 aa8.8□□□□□ -1
CLSTN3-207ENST00000537408 ANXA2RQ3ZCQ2 193 aa8.8□□□□□ -1
CLSTN3-207ENST00000537408 ABHD12Q8N2K0 398 aa8.8□□□□□ -1
CLSTN3-207ENST00000537408 PTH2Q96A98 100 aa8.8□□□□□ -1
CLSTN3-207ENST00000537408 IFI27L1Q96BM0 104 aa8.8□□□□□ -1
CLSTN3-207ENST00000537408 CCDC179H3BU77 68 aa8.8□□□□□ -1
CLSTN3-207ENST00000537408 EFNA2O43921 213 aa8.8□□□□□ -1
CLSTN3-207ENST00000537408 PLA2G2AP14555 144 aa8.8□□□□□ -1
CLSTN3-207ENST00000537408 MOGAT3Q86VF5 341 aa8.8□□□□□ -1
CLSTN3-207ENST00000537408 COL5A1P20908 1838 aaPredicted RBP8.8□□□□□ -1
CLSTN3-207ENST00000537408 CENPVL3A0A0U1RRI6 287 aa8.8□□□□□ -1
CLSTN3-207ENST00000537408 DAZAP2Q15038 168 aaPredicted RBP8.8□□□□□ -1
CLSTN3-207ENST00000537408 Q8TCH9 128 aa8.8□□□□□ -1
CLSTN3-207ENST00000537408 PHLDA1Q8WV24 401 aaPredicted RBP8.8□□□□□ -1
CLSTN3-207ENST00000537408 CHD7Q9P2D1 2997 aa8.79□□□□□ -1
CLSTN3-207ENST00000537408 TNFRSF13BO14836 293 aaPredicted RBP8.79□□□□□ -1
CLSTN3-207ENST00000537408 PRTN3P24158 256 aa8.79□□□□□ -1
CLSTN3-207ENST00000537408 SRXN1Q9BYN0 137 aa8.79□□□□□ -1
CLSTN3-207ENST00000537408 OR2H1Q9GZK4 316 aa8.79□□□□□ -1
CLSTN3-207ENST00000537408 TCF19Q9Y242 345 aa8.79□□□□□ -1
CLSTN3-207ENST00000537408 MEIG1Q5JSS6 88 aa8.79□□□□□ -1
CLSTN3-207ENST00000537408 HS3ST6Q96QI5 342 aa8.79□□□□□ -1
CLSTN3-207ENST00000537408 CHD9Q3L8U1 2897 aa8.79□□□□□ -1
CLSTN3-207ENST00000537408 TNRC18O15417 2968 aaPredicted RBP8.79□□□□□ -1
CLSTN3-207ENST00000537408 PTPN13Q12923 2485 aa8.79□□□□□ -1
CLSTN3-207ENST00000537408 TRBV20-1A0A075B6N2 111 aa8.79□□□□□ -1
CLSTN3-207ENST00000537408 RHODO00212 210 aa8.79□□□□□ -1
CLSTN3-207ENST00000537408 PRR20EP86478 221 aa8.79□□□□□ -1
CLSTN3-207ENST00000537408 PRR20CP86479 221 aa8.79□□□□□ -1
CLSTN3-207ENST00000537408 PRR20DP86480 221 aa8.79□□□□□ -1
CLSTN3-207ENST00000537408 PRR20BP86481 221 aa8.79□□□□□ -1
CLSTN3-207ENST00000537408 PRR20AP86496 221 aa8.79□□□□□ -1
CLSTN3-207ENST00000537408 ASPHD1Q5U4P2 390 aa8.79□□□□□ -1
CLSTN3-207ENST00000537408 LINC00479Q96M42 142 aa8.79□□□□□ -1
CLSTN3-207ENST00000537408 PRO0461Q9UI25 63 aa8.79□□□□□ -1
CLSTN3-207ENST00000537408 PSMB2P49721 201 aa8.78□□□□□ -1
CLSTN3-207ENST00000537408 PLGLAQ15195 96 aa8.78□□□□□ -1
CLSTN3-207ENST00000537408 CXorf67Q86X51 503 aaPredicted RBP8.78□□□□□ -1
CLSTN3-207ENST00000537408 DEFB108BQ8NET1 73 aa8.78□□□□□ -1
CLSTN3-207ENST00000537408 IGFL2Q6UWQ7 119 aa8.78□□□□□ -1
CLSTN3-207ENST00000537408 PAXXQ9BUH6 204 aa8.78□□□□□ -1
CLSTN3-207ENST00000537408 POLEQ07864 2286 aa8.78□□□□□ -1
CLSTN3-207ENST00000537408 PKD1L2Q7Z442 2459 aa8.78□□□□□ -1
CLSTN3-207ENST00000537408 A8MWV9 139 aa8.78□□□□□ -1
CLSTN3-207ENST00000537408 TEN1Q86WV5 123 aa8.78□□□□□ -1
CLSTN3-207ENST00000537408 FADS6Q8N9I5 356 aa8.78□□□□□ -1
CLSTN3-207ENST00000537408 ZNF488Q96MN9 340 aa8.78□□□□□ -1
CLSTN3-207ENST00000537408 CITED2Q99967 270 aaPredicted RBP8.78□□□□□ -1
CLSTN3-207ENST00000537408 LOC389332A0A1B0GUA5 103 aa8.77□□□□□ -1
CLSTN3-207ENST00000537408 HAX1O00165 279 aa8.77□□□□□ -1
CLSTN3-207ENST00000537408 COL8A1P27658 744 aa8.77□□□□□ -1
CLSTN3-207ENST00000537408 CR1LQ2VPA4 569 aa8.77□□□□□ -1
CLSTN3-207ENST00000537408 KLF17Q5JT82 389 aaPredicted RBP8.77□□□□□ -1
CLSTN3-207ENST00000537408 Q8IYB0 196 aa8.77□□□□□ -1
CLSTN3-207ENST00000537408 KLF12Q9Y4X4 402 aa8.77□□□□□ -1
CLSTN3-207ENST00000537408 LAMA3Q16787 3333 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 A0A087WX48 190 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 TMEM30CPA0ZSE6 113 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 COX7A2P2O60397 106 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 FCGR3BO75015 233 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 MPV17P39210 176 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 ZNF492Q9P255 531 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 A0A1B0GUT8 65 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 K7EM74 188 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 HOXA3O43365 443 aaPredicted RBP8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 SRD5A1P18405 259 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 ASIPP42127 132 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 ALKBH6Q3KRA9 238 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 ZNF497Q6ZNH5 498 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 MED12LQ86YW9 2145 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 SLC25A2Q9BXI2 301 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 FBXL15Q9H469 300 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 TRBV25-1A0A075B6N4 114 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 LOC107984156A0A0G2JMH3 177 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 SHISA9B4DS77 424 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 NGFP01138 241 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 ARL17AQ8IVW1 177 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 C18orf15Q96N68 181 aa8.77□□□□□ -1.01
CLSTN3-207ENST00000537408 FZR1Q9UM11 496 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms