RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.48□□□□□ -0.41
SFSWAP-205ENST00000537164 PATE2Q6UY27 113 aa12.48□□□□□ -0.41
SFSWAP-205ENST00000537164 ZNF546Q86UE3 836 aa12.48□□□□□ -0.41
SFSWAP-205ENST00000537164 LINC00052Q96N35 136 aa12.48□□□□□ -0.41
SFSWAP-205ENST00000537164 RSG1Q9BU20 258 aa12.48□□□□□ -0.41
SFSWAP-205ENST00000537164 SCRT1Q9BWW7 348 aa12.48□□□□□ -0.41
SFSWAP-205ENST00000537164 X6R8D5 127 aa12.48□□□□□ -0.41
SFSWAP-205ENST00000537164 CXorf65A6NEN9 183 aa12.47□□□□□ -0.41
SFSWAP-205ENST00000537164 FAM24AA6NFZ4 105 aa12.47□□□□□ -0.41
SFSWAP-205ENST00000537164 A8MTW9 85 aa12.47□□□□□ -0.41
SFSWAP-205ENST00000537164 RPL7P18124 248 aaKnown RBP12.47□□□□□ -0.41
SFSWAP-205ENST00000537164 SULT1A1P50225 295 aa12.47□□□□□ -0.41
SFSWAP-205ENST00000537164 CEMP1Q6PRD7 247 aaPredicted RBP12.47□□□□□ -0.41
SFSWAP-205ENST00000537164 MGST2Q99735 147 aa12.47□□□□□ -0.41
SFSWAP-205ENST00000537164 ARL6Q9H0F7 186 aa12.47□□□□□ -0.41
SFSWAP-205ENST00000537164 RPRMQ9NS64 109 aa12.47□□□□□ -0.41
SFSWAP-205ENST00000537164 DOK5Q9P104 306 aa12.47□□□□□ -0.41
SFSWAP-205ENST00000537164 RNF24Q9Y225 148 aa12.47□□□□□ -0.41
SFSWAP-205ENST00000537164 A0A0J9YX75 114 aa12.46□□□□□ -0.41
SFSWAP-205ENST00000537164 INMT-MINDY4F8WBC2 141 aa12.46□□□□□ -0.41
SFSWAP-205ENST00000537164 GOSR2O14653 212 aa12.46□□□□□ -0.41
SFSWAP-205ENST00000537164 JTBO76095 146 aa12.46□□□□□ -0.41
SFSWAP-205ENST00000537164 CST7O76096 145 aa12.46□□□□□ -0.41
SFSWAP-205ENST00000537164 OR5G3P0C626 314 aa12.46□□□□□ -0.41
SFSWAP-205ENST00000537164 S100A11P31949 105 aa12.46□□□□□ -0.41
SFSWAP-205ENST00000537164 BCAP31P51572 246 aa12.46□□□□□ -0.41
SFSWAP-205ENST00000537164 DEFB1P60022 68 aa12.46□□□□□ -0.41
SFSWAP-205ENST00000537164 PMS2P11Q13670 270 aa12.46□□□□□ -0.41
SFSWAP-205ENST00000537164 TMEM252Q8N6L7 170 aa12.46□□□□□ -0.41
SFSWAP-205ENST00000537164 C16orf92Q96LL3 132 aa12.46□□□□□ -0.41
SFSWAP-205ENST00000537164 C20orf173Q96LM9 149 aa12.46□□□□□ -0.41
SFSWAP-205ENST00000537164 UHRF2Q96PU4 802 aa12.46□□□□□ -0.41
SFSWAP-205ENST00000537164 NMES1Q9C002 83 aa12.46□□□□□ -0.41
SFSWAP-205ENST00000537164 MFFQ9GZY8 342 aa12.46□□□□□ -0.41
SFSWAP-205ENST00000537164 ARV1Q9H2C2 271 aa12.46□□□□□ -0.41
SFSWAP-205ENST00000537164 HRH4Q9H3N8 390 aa12.46□□□□□ -0.41
SFSWAP-205ENST00000537164 CLEC5AQ9NY25 188 aa12.46□□□□□ -0.41
SFSWAP-205ENST00000537164 ALMS1Q8TCU4 4167 aa12.46□□□□□ -0.42
SFSWAP-205ENST00000537164 A0A087X0K7 114 aa12.45□□□□□ -0.42
SFSWAP-205ENST00000537164 IGHV4-28A0A0C4DH34 117 aa12.45□□□□□ -0.42
SFSWAP-205ENST00000537164 MRPS12O15235 138 aaKnown RBP12.45□□□□□ -0.42
SFSWAP-205ENST00000537164 RBMY1A1P0DJD3 496 aaKnown RBP12.45□□□□□ -0.42
SFSWAP-205ENST00000537164 RBMY1CP0DJD4 496 aa12.45□□□□□ -0.42
SFSWAP-205ENST00000537164 DEFA1P59665 94 aa12.45□□□□□ -0.42
SFSWAP-205ENST00000537164 DEFA3P59666 94 aa12.45□□□□□ -0.42
SFSWAP-205ENST00000537164 S100A10P60903 97 aa12.45□□□□□ -0.42
SFSWAP-205ENST00000537164 RBMY1FQ15415 496 aaKnown RBP12.45□□□□□ -0.42
SFSWAP-205ENST00000537164 ZNF709Q8N972 641 aa12.45□□□□□ -0.42
SFSWAP-205ENST00000537164 C11orf45Q8TAV5 145 aa12.45□□□□□ -0.42
SFSWAP-205ENST00000537164 CHAC2Q8WUX2 184 aa12.45□□□□□ -0.42
SFSWAP-205ENST00000537164 UQCC1Q9NVA1 299 aa12.45□□□□□ -0.42
SFSWAP-205ENST00000537164 WDR83OSQ9Y284 106 aa12.45□□□□□ -0.42
SFSWAP-205ENST00000537164 ELOA3CA0A087WX78 387 aaPredicted RBP12.44□□□□□ -0.42
SFSWAP-205ENST00000537164 TRAV8-2A0A0B4J237 113 aa12.44□□□□□ -0.42
SFSWAP-205ENST00000537164 IGSF23A1L1A6 192 aa12.44□□□□□ -0.42
SFSWAP-205ENST00000537164 PRR20EP86478 221 aa12.44□□□□□ -0.42
SFSWAP-205ENST00000537164 PRR20CP86479 221 aa12.44□□□□□ -0.42
SFSWAP-205ENST00000537164 PRR20DP86480 221 aa12.44□□□□□ -0.42
SFSWAP-205ENST00000537164 PRR20BP86481 221 aa12.44□□□□□ -0.42
SFSWAP-205ENST00000537164 PRR20AP86496 221 aa12.44□□□□□ -0.42
SFSWAP-205ENST00000537164 EBLN2Q6P2I7 272 aa12.44□□□□□ -0.42
SFSWAP-205ENST00000537164 ZNF705AQ6ZN79 300 aaPredicted RBP12.44□□□□□ -0.42
SFSWAP-205ENST00000537164 PHLDA1Q8WV24 401 aaPredicted RBP12.44□□□□□ -0.42
SFSWAP-205ENST00000537164 TMEM37Q8WXS4 190 aa12.44□□□□□ -0.42
SFSWAP-205ENST00000537164 NEU1Q99519 415 aa12.44□□□□□ -0.42
SFSWAP-205ENST00000537164 XCL2Q9UBD3 114 aa12.44□□□□□ -0.42
SFSWAP-205ENST00000537164 F6UB75 175 aa12.43□□□□□ -0.42
SFSWAP-205ENST00000537164 DEFB4AO15263 64 aa12.43□□□□□ -0.42
SFSWAP-205ENST00000537164 CAMLGP49069 296 aa12.43□□□□□ -0.42
SFSWAP-205ENST00000537164 HBG1P69891 147 aa12.43□□□□□ -0.42
SFSWAP-205ENST00000537164 HBG2P69892 147 aa12.43□□□□□ -0.42
SFSWAP-205ENST00000537164 CYCSP99999 105 aaKnown RBP12.43□□□□□ -0.42
SFSWAP-205ENST00000537164 RAB31Q13636 194 aa12.43□□□□□ -0.42
SFSWAP-205ENST00000537164 ATP6V1FQ16864 119 aa12.43□□□□□ -0.42
SFSWAP-205ENST00000537164 FAM78BQ5VT40 261 aa12.43□□□□□ -0.42
SFSWAP-205ENST00000537164 LINC00305Q7Z4B0 112 aa12.43□□□□□ -0.42
SFSWAP-205ENST00000537164 STX12Q86Y82 276 aa12.43□□□□□ -0.42
SFSWAP-205ENST00000537164 KLK5Q9Y337 293 aaPredicted RBP12.43□□□□□ -0.42
SFSWAP-205ENST00000537164 ZNF705FA8MVS1 300 aaPredicted RBP12.42□□□□□ -0.42
SFSWAP-205ENST00000537164 SIX6O95475 246 aa12.42□□□□□ -0.42
SFSWAP-205ENST00000537164 ZNF705DP0CH99 300 aaPredicted RBP12.42□□□□□ -0.42
SFSWAP-205ENST00000537164 ZNF705BP0CI00 300 aaPredicted RBP12.42□□□□□ -0.42
SFSWAP-205ENST00000537164 RPL29P47914 159 aaKnown RBP12.42□□□□□ -0.42
SFSWAP-205ENST00000537164 NANOS2P60321 138 aaKnown RBP12.42□□□□□ -0.42
SFSWAP-205ENST00000537164 PSG9Q00887 426 aa12.42□□□□□ -0.42
SFSWAP-205ENST00000537164 IGKV3-20P01619 116 aa12.41□□□□□ -0.42
SFSWAP-205ENST00000537164 CXCL2P19875 107 aa12.41□□□□□ -0.42
SFSWAP-205ENST00000537164 H2BFSP57053 126 aa12.41□□□□□ -0.42
SFSWAP-205ENST00000537164 AMTNQ6UX39 209 aa12.41□□□□□ -0.42
SFSWAP-205ENST00000537164 OR4B1Q8NGF8 309 aa12.41□□□□□ -0.42
SFSWAP-205ENST00000537164 HYDINQ4G0P3 5121 aa12.41□□□□□ -0.42
SFSWAP-205ENST00000537164 SMIM9A6NGZ8 99 aa12.4□□□□□ -0.42
SFSWAP-205ENST00000537164 E5RGE8 158 aa12.4□□□□□ -0.42
SFSWAP-205ENST00000537164 COX7A2P2O60397 106 aa12.4□□□□□ -0.42
SFSWAP-205ENST00000537164 MPDU1O75352 247 aa12.4□□□□□ -0.42
SFSWAP-205ENST00000537164 RLN2P04090 185 aa12.4□□□□□ -0.42
SFSWAP-205ENST00000537164 CXCL3P19876 107 aa12.4□□□□□ -0.42
SFSWAP-205ENST00000537164 OPCMLQ14982 345 aa12.4□□□□□ -0.42
SFSWAP-205ENST00000537164 C10orf113Q5VZT2 155 aa12.4□□□□□ -0.42
SFSWAP-205ENST00000537164 MIC13Q5XKP0 118 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms