RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 NABP2Q9BQ15 211 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 PLEKHA3Q9HB20 300 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 LYRM4Q9HD34 91 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 ENY2Q9NPA8 101 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 TCF19Q9Y242 345 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 RIF1Q5UIP0 2472 aaKnown RBP2.99□□□□□ -1.93
MCF2-210ENST00000536274 TRBV25-1A0A075B6N4 114 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 TRAV8-1A0A0A6YYK1 113 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 OR9G9P0C7N8 305 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 GAGE2BQ13066 116 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 GAGE2EQ4V326 116 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 CT83Q5H943 113 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 FAM19A5Q7Z5A7 132 aaPredicted RBP2.99□□□□□ -1.93
MCF2-210ENST00000536274 PRSS3P2Q8NHM4 247 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 SLC25A33Q9BSK2 321 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 RAB9BQ9NP90 201 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 GAGE2DQ9UEU5 116 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 WDR83OSQ9Y284 106 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 ABCA1O95477 2261 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 PCNX2A6NKB5 2137 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 A0A1W2PQM1 296 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 OR2H2O95918 312 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 IGHV3-9P01782 118 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 IGHMP01871 453 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 KIR2DS4P43632 304 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 ERVK11-1P61568 191 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 CCL7P80098 99 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 MZT1Q08AG7 82 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 RAX2Q96IS3 184 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 PSMG3-AS1Q96PY0 264 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 SOX21Q9Y651 276 aaPredicted RBP2.99□□□□□ -1.93
MCF2-210ENST00000536274 TNCP24821 2201 aa2.99□□□□□ -1.93
MCF2-210ENST00000536274 OR2J3O76001 311 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 IFITM1P13164 125 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 CRIP2P52943 208 aaPredicted RBP2.98□□□□□ -1.93
MCF2-210ENST00000536274 CFAP126Q5VTH2 177 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 CEND1Q8N111 149 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 ZNF645Q8N7E2 425 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 RFESDQ8TAC1 157 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 AP5S1Q9NUS5 200 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 TMEM160Q9NX00 188 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 C21orf62Q9NYP8 219 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 NCOR2Q9Y618 2525 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 PLXNB1O43157 2135 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 EML6Q6ZMW3 1958 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 SVEP1Q4LDE5 3571 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 hADV38S2A0JD32 116 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 LINC00473A8K010 186 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 RHODO00212 210 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 GAS8-AS1O95177 125 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 TNFRSF6BO95407 300 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 IGLV3-1P01715 115 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 PRNPP04156 253 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 TNFRSF1AP19438 455 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 DRD3P35462 400 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 HBBP68871 147 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 C4orf26Q17RF5 130 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 TBC1D28Q2M2D7 210 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 SLC25A47Q6Q0C1 308 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 RASL11AQ6T310 242 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 ANKRD29Q8N6D5 301 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 OR4X2Q8NGF9 303 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 ZNF502Q8TBZ5 544 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 NRGNQ92686 78 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 C11orf52Q96A22 123 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 TACC2O95359 2948 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 TRAV8-2A0A0B4J237 113 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 LY6G6EA0A0G2JKS1 128 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 A0A1B0GXF2 115 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 FAM90A18PA6NE21 464 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 FAM90A16PA6NEW6 464 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 FAM90A8PA6NJQ4 464 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 FAM90A9PA6NNJ1 464 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 ZNF672Q499Z4 452 aaPredicted RBP2.98□□□□□ -1.93
MCF2-210ENST00000536274 MORN3Q6PF18 240 aaPredicted RBP2.98□□□□□ -1.93
MCF2-210ENST00000536274 C17orf82Q86X59 251 aaPredicted RBP2.98□□□□□ -1.93
MCF2-210ENST00000536274 NPIPB3Q92617 1050 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 RASL10AQ92737 203 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 CHCHD1Q96BP2 118 aaKnown RBP2.98□□□□□ -1.93
MCF2-210ENST00000536274 C16orf92Q96LL3 132 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 HIST1H4GQ99525 98 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 FBXL15Q9H469 300 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 SIGLEC8Q9NYZ4 499 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 CTSZQ9UBR2 303 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 U3KQA8 63 aa2.98□□□□□ -1.93
MCF2-210ENST00000536274 ASXL3Q9C0F0 2248 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 EPG5Q9HCE0 2579 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 IGKV1OR2-108A0A075B7D4 117 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 LINC01549A6NIU2 74 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 FAM90A26D6RGX4 464 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 TMEM262E9PQX1 116 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 SNCGO76070 127 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 ARMS2P0C7Q2 107 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 HLA-DRB4P13762 266 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 MEOX1P50221 254 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 OR1C1Q15619 314 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 RHBDD2Q6NTF9 364 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 CEMP1Q6PRD7 247 aaPredicted RBP2.97□□□□□ -1.93
MCF2-210ENST00000536274 HRCT1Q6UXD1 115 aa2.97□□□□□ -1.93
MCF2-210ENST00000536274 MKXQ8IYA7 352 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms