RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 APOOQ9BUR5 198 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 TMEM59Q9BXS4 323 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 KCNK15Q9H427 330 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 FBXL15Q9H469 300 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 ZNF331Q9NQX6 463 aaPredicted RBP1.94□□□□□ -2.1
SKA3-207ENST00000536239 OSTCQ9NRP0 149 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 C21orf62Q9NYP8 219 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 TECRQ9NZ01 308 aaKnown RBP1.94□□□□□ -2.1
SKA3-207ENST00000536239 B9D1Q9UPM9 204 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 FOXA2Q9Y261 457 aaPredicted RBP1.94□□□□□ -2.1
SKA3-207ENST00000536239 CHCHD2Q9Y6H1 151 aaPredicted RBP1.94□□□□□ -2.1
SKA3-207ENST00000536239 SCN3AQ9NY46 2000 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 PTPRBP23467 1997 aa1.94□□□□□ -2.1
SKA3-207ENST00000536239 FANCMQ8IYD8 2048 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 EML5Q05BV3 1969 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 IGHV4-4A0A075B6R2 117 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 SMIM28A0A1B0GU29 152 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 LOC107986453A0A1B0GWG9 222 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 SMIM27A0A1W2PRY6 76 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 IZUMO1RA6ND01 250 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 TMEM14DPA8MWL7 114 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 A8MWV9 139 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 C11orf94C9JXX5 98 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 LINC01619G3V211 115 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 ENSAO43768 121 aaKnown RBP1.93□□□□□ -2.1
SKA3-207ENST00000536239 PAGE4O60829 102 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 NDUFB2O95178 105 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 NUDT14O95848 222 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 NGFP01138 241 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 PRB2P02812 416 aaPredicted RBP1.93□□□□□ -2.1
SKA3-207ENST00000536239 GYPBP06028 91 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 CECR9P0C854 216 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 SCGB1C2P0DMR2 95 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 CRYGAP11844 174 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 HLA-DRB4P13762 266 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 PRDX2P32119 198 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 NMUP48645 174 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 ZNF136P52737 540 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 PFN3P60673 137 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 TMEM258P61165 79 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 HBG1P69891 147 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 HBG2P69892 147 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 EIF3IQ13347 325 aaKnown RBP1.93□□□□□ -2.1
SKA3-207ENST00000536239 UNC119Q13432 240 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 ARFRP1Q13795 201 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 GUSBP1Q15486 140 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 MLF2Q15773 248 aaPredicted RBP1.93□□□□□ -2.1
SKA3-207ENST00000536239 C4orf26Q17RF5 130 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 ABCA11PQ4W5N1 156 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 KLF17Q5JT82 389 aaPredicted RBP1.93□□□□□ -2.1
SKA3-207ENST00000536239 FAM120AOSQ5T036 256 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 C1orf140Q5VVS0 124 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 LYSMD4Q5XG99 296 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 OR4C11Q6IEV9 310 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 ACP7Q6ZNF0 438 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 LINC00336Q6ZUF6 198 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 GOLT1AQ6ZVE7 132 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 IL17RELQ6ZVW7 336 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 LYZL2Q7Z4W2 148 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 HSD11B1LQ7Z5J1 315 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 LYPD6Q86Y78 171 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 PIANPQ8IYJ0 282 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 CEND1Q8N111 149 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 SLC22A24Q8N4F4 322 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 TMEM86BQ8N661 226 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 OR2A1Q8NGT9 310 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 ACER1Q8TDN7 264 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 LRRC29Q8WV35 223 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 UBE2E3Q969T4 207 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 PLEKHB2Q96CS7 222 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 DNAJA3Q96EY1 480 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 C4orf45Q96LM5 186 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 CARD19Q96LW7 228 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 SPATA33Q96N06 139 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 PRSS27Q9BQR3 290 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 SLC25A39Q9BZJ4 359 aaPredicted RBP1.93□□□□□ -2.1
SKA3-207ENST00000536239 ULBP3Q9BZM4 244 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 PBOV1Q9GZY1 135 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 EDA2RQ9HAV5 297 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 TNFRSF19Q9NS68 423 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 FZR1Q9UM11 496 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 TP53TG1Q9Y2A0 90 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 HILPDAQ9Y5L2 63 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 V9GYV3 84 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 HLA-DRB4X5D2U9 266 aa1.93□□□□□ -2.1
SKA3-207ENST00000536239 SCN10AQ9Y5Y9 1956 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 TDRD6O60522 2096 aaKnown RBP1.92□□□□□ -2.1
SKA3-207ENST00000536239 RALGAPA1Q6GYQ0 2036 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 A0A0A6YYD5 115 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 TRAV4A0A0B4J268 109 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 CCL15-CCL14A0A0B4J2E2 113 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 TRBV5-4A0A0C4DH59 114 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 TRBV7-7A0A0K0K1E9 115 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 C3orf85A0A1B0GTC6 90 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 TMEM89A2RUT3 159 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 SHISA9B4DS77 424 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 C2CD4DB7Z1M9 353 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 SSSCA1O60232 199 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 PDCD6O75340 191 aa1.92□□□□□ -2.1
SKA3-207ENST00000536239 MPDU1O75352 247 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms