RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 PXMP4Q9Y6I8 212 aa8.35□□□□□ -1.07
TNFRSF1A-208ENST00000536194 HUWE1Q7Z6Z7 4374 aaKnown RBP8.35□□□□□ -1.07
TNFRSF1A-208ENST00000536194 KNCNA6PVL3 124 aa8.34□□□□□ -1.07
TNFRSF1A-208ENST00000536194 MPDU1O75352 247 aa8.34□□□□□ -1.07
TNFRSF1A-208ENST00000536194 RPL35AP18077 110 aaKnown RBP8.34□□□□□ -1.07
TNFRSF1A-208ENST00000536194 GCSAMLQ5JQS6 135 aa8.34□□□□□ -1.07
TNFRSF1A-208ENST00000536194 PSMG4Q5JS54 123 aa8.34□□□□□ -1.07
TNFRSF1A-208ENST00000536194 C10orf113Q5VZT2 155 aa8.34□□□□□ -1.07
TNFRSF1A-208ENST00000536194 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.34□□□□□ -1.07
TNFRSF1A-208ENST00000536194 LINC00305Q7Z4B0 112 aa8.34□□□□□ -1.07
TNFRSF1A-208ENST00000536194 OR2T35Q8NGX2 323 aa8.34□□□□□ -1.07
TNFRSF1A-208ENST00000536194 AQP10Q96PS8 301 aa8.34□□□□□ -1.07
TNFRSF1A-208ENST00000536194 RSG1Q9BU20 258 aa8.34□□□□□ -1.07
TNFRSF1A-208ENST00000536194 RFNGQ9Y644 331 aa8.34□□□□□ -1.07
TNFRSF1A-208ENST00000536194 U3KQK5 164 aa8.34□□□□□ -1.07
TNFRSF1A-208ENST00000536194 ELOA3CA0A087WX78 387 aaPredicted RBP8.33□□□□□ -1.08
TNFRSF1A-208ENST00000536194 RNF222A6NCQ9 220 aa8.33□□□□□ -1.08
TNFRSF1A-208ENST00000536194 COX7A2P2O60397 106 aa8.33□□□□□ -1.08
TNFRSF1A-208ENST00000536194 GALR1P47211 349 aa8.33□□□□□ -1.08
TNFRSF1A-208ENST00000536194 DEFB1P60022 68 aa8.33□□□□□ -1.08
TNFRSF1A-208ENST00000536194 FGL1Q08830 312 aa8.33□□□□□ -1.08
TNFRSF1A-208ENST00000536194 Q6ZRG5 221 aa8.33□□□□□ -1.08
TNFRSF1A-208ENST00000536194 GPR82Q96P67 336 aa8.33□□□□□ -1.08
TNFRSF1A-208ENST00000536194 RCHY1Q96PM5 261 aa8.33□□□□□ -1.08
TNFRSF1A-208ENST00000536194 SEPSECSQ9HD40 501 aaKnown RBP8.33□□□□□ -1.08
TNFRSF1A-208ENST00000536194 DNAJC4Q9NNZ3 241 aa8.33□□□□□ -1.08
TNFRSF1A-208ENST00000536194 TRAV5A0A0B4J249 113 aa8.32□□□□□ -1.08
TNFRSF1A-208ENST00000536194 SMLR1H3BR10 107 aa8.32□□□□□ -1.08
TNFRSF1A-208ENST00000536194 RPL7P18124 248 aaKnown RBP8.32□□□□□ -1.08
TNFRSF1A-208ENST00000536194 S100A7P31151 101 aa8.32□□□□□ -1.08
TNFRSF1A-208ENST00000536194 PSMB3P49720 205 aa8.32□□□□□ -1.08
TNFRSF1A-208ENST00000536194 GDF5OSQ5U4N7 250 aa8.32□□□□□ -1.08
TNFRSF1A-208ENST00000536194 TRPT1Q86TN4 253 aaKnown RBP8.32□□□□□ -1.08
TNFRSF1A-208ENST00000536194 C20orf173Q96LM9 149 aa8.32□□□□□ -1.08
TNFRSF1A-208ENST00000536194 SPATA25Q9BR10 227 aa8.32□□□□□ -1.08
TNFRSF1A-208ENST00000536194 ZMAT4Q9H898 229 aa8.32□□□□□ -1.08
TNFRSF1A-208ENST00000536194 TNFSF18Q9UNG2 199 aa8.32□□□□□ -1.08
TNFRSF1A-208ENST00000536194 TENM3Q9P273 2699 aa8.32□□□□□ -1.08
TNFRSF1A-208ENST00000536194 FXYD6-FXYD2A0A087WZ82 144 aa8.31□□□□□ -1.08
TNFRSF1A-208ENST00000536194 A0A087X0K7 114 aa8.31□□□□□ -1.08
TNFRSF1A-208ENST00000536194 TRAV8-2A0A0B4J237 113 aa8.31□□□□□ -1.08
TNFRSF1A-208ENST00000536194 KIR2DL5BA0A0G2JN68 375 aa8.31□□□□□ -1.08
TNFRSF1A-208ENST00000536194 KIR2DL5BA0A0G2JPC4 375 aa8.31□□□□□ -1.08
TNFRSF1A-208ENST00000536194 ISLRO14498 428 aa8.31□□□□□ -1.08
TNFRSF1A-208ENST00000536194 SNRPCP09234 159 aaKnown RBP8.31□□□□□ -1.08
TNFRSF1A-208ENST00000536194 SNRPD3P62318 126 aaKnown RBP8.31□□□□□ -1.08
TNFRSF1A-208ENST00000536194 ACTL10Q5JWF8 245 aa8.31□□□□□ -1.08
TNFRSF1A-208ENST00000536194 IGFL4Q6B9Z1 124 aa8.31□□□□□ -1.08
TNFRSF1A-208ENST00000536194 KIR2DL5AQ8N109 375 aa8.31□□□□□ -1.08
TNFRSF1A-208ENST00000536194 OR1L4Q8NGR5 311 aa8.31□□□□□ -1.08
TNFRSF1A-208ENST00000536194 KIR2DL5BQ8NHK3 375 aa8.31□□□□□ -1.08
TNFRSF1A-208ENST00000536194 GATAD1Q8WUU5 269 aa8.31□□□□□ -1.08
TNFRSF1A-208ENST00000536194 PFDN5Q99471 154 aa8.31□□□□□ -1.08
TNFRSF1A-208ENST00000536194 OVOL2Q9BRP0 275 aa8.31□□□□□ -1.08
TNFRSF1A-208ENST00000536194 PARD6GQ9BYG4 376 aaPredicted RBP8.31□□□□□ -1.08
TNFRSF1A-208ENST00000536194 GIG44P09565 113 aaPredicted RBP8.3□□□□□ -1.08
TNFRSF1A-208ENST00000536194 IGLC2P0DOY2 106 aa8.3□□□□□ -1.08
TNFRSF1A-208ENST00000536194 ATF4P18848 351 aaPredicted RBP8.3□□□□□ -1.08
TNFRSF1A-208ENST00000536194 HLA-DMBP28068 263 aa8.3□□□□□ -1.08
TNFRSF1A-208ENST00000536194 MEOX2P50222 304 aa8.3□□□□□ -1.08
TNFRSF1A-208ENST00000536194 APOC4P55056 127 aa8.3□□□□□ -1.08
TNFRSF1A-208ENST00000536194 DEFB135Q30KP9 77 aa8.3□□□□□ -1.08
TNFRSF1A-208ENST00000536194 SPATA31B1PQ5VZV4 182 aa8.3□□□□□ -1.08
TNFRSF1A-208ENST00000536194 Q6ZNX1 250 aa8.3□□□□□ -1.08
TNFRSF1A-208ENST00000536194 S100A7AQ86SG5 101 aa8.3□□□□□ -1.08
TNFRSF1A-208ENST00000536194 STHQ8IWL8 128 aa8.3□□□□□ -1.08
TNFRSF1A-208ENST00000536194 C16orf92Q96LL3 132 aa8.3□□□□□ -1.08
TNFRSF1A-208ENST00000536194 LINC00052Q96N35 136 aa8.3□□□□□ -1.08
TNFRSF1A-208ENST00000536194 C17orf112F2Z3M2 114 aa8.29□□□□□ -1.08
TNFRSF1A-208ENST00000536194 F6UB75 175 aa8.29□□□□□ -1.08
TNFRSF1A-208ENST00000536194 H3BMM0 161 aa8.29□□□□□ -1.08
TNFRSF1A-208ENST00000536194 H3BQ15 152 aa8.29□□□□□ -1.08
TNFRSF1A-208ENST00000536194 H3BTX0 84 aa8.29□□□□□ -1.08
TNFRSF1A-208ENST00000536194 SLC17A3O00476 420 aa8.29□□□□□ -1.08
TNFRSF1A-208ENST00000536194 IFNA5P01569 189 aa8.29□□□□□ -1.08
TNFRSF1A-208ENST00000536194 HLA-DRB4P13762 266 aa8.29□□□□□ -1.08
TNFRSF1A-208ENST00000536194 C4BPBP20851 252 aa8.29□□□□□ -1.08
TNFRSF1A-208ENST00000536194 ID1P41134 155 aa8.29□□□□□ -1.08
TNFRSF1A-208ENST00000536194 FAM78BQ5VT40 261 aa8.29□□□□□ -1.08
TNFRSF1A-208ENST00000536194 BPIFA4PQ86YQ2 179 aa8.29□□□□□ -1.08
TNFRSF1A-208ENST00000536194 RNF182Q8N6D2 247 aa8.29□□□□□ -1.08
TNFRSF1A-208ENST00000536194 ZNF709Q8N972 641 aa8.29□□□□□ -1.08
TNFRSF1A-208ENST00000536194 OR11H4Q8NGC9 324 aa8.29□□□□□ -1.08
TNFRSF1A-208ENST00000536194 SCGB1C1Q8TD33 95 aa8.29□□□□□ -1.08
TNFRSF1A-208ENST00000536194 FAM167A-AS1Q96KT0 104 aa8.29□□□□□ -1.08
TNFRSF1A-208ENST00000536194 SLC25A2Q9BXI2 301 aa8.29□□□□□ -1.08
TNFRSF1A-208ENST00000536194 CSTL1Q9H114 145 aa8.29□□□□□ -1.08
TNFRSF1A-208ENST00000536194 HLA-DRB4X5D2U9 266 aa8.29□□□□□ -1.08
TNFRSF1A-208ENST00000536194 UBE2CO00762 179 aa8.28□□□□□ -1.08
TNFRSF1A-208ENST00000536194 PRB4P10163 310 aaPredicted RBP8.28□□□□□ -1.08
TNFRSF1A-208ENST00000536194 FFAR4Q5NUL3 377 aa8.28□□□□□ -1.08
TNFRSF1A-208ENST00000536194 SAMD13Q5VXD3 122 aa8.28□□□□□ -1.08
TNFRSF1A-208ENST00000536194 FOXI2Q6ZQN5 318 aa8.28□□□□□ -1.08
TNFRSF1A-208ENST00000536194 Q6ZWC4 215 aa8.28□□□□□ -1.08
TNFRSF1A-208ENST00000536194 MIR17HGQ75NE6 70 aa8.28□□□□□ -1.08
TNFRSF1A-208ENST00000536194 INO80EQ8NBZ0 244 aaPredicted RBP8.28□□□□□ -1.08
TNFRSF1A-208ENST00000536194 SAT2Q96F10 170 aaPredicted RBP8.28□□□□□ -1.08
TNFRSF1A-208ENST00000536194 HRH4Q9H3N8 390 aa8.28□□□□□ -1.08
TNFRSF1A-208ENST00000536194 SAV1Q9H4B6 383 aaPredicted RBP8.28□□□□□ -1.08
TNFRSF1A-208ENST00000536194 ZNF331Q9NQX6 463 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms