RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 MSRB2Q9Y3D2 182 aa10.43□□□□□ -0.74
LDLR-203ENST00000535915 VWC2LB2RUY7 222 aa10.43□□□□□ -0.74
LDLR-203ENST00000535915 DIRC3C9JPN6 131 aa10.43□□□□□ -0.74
LDLR-203ENST00000535915 TOX4O94842 621 aa10.43□□□□□ -0.74
LDLR-203ENST00000535915 P01737 135 aa10.43□□□□□ -0.74
LDLR-203ENST00000535915 NTF3P20783 257 aa10.43□□□□□ -0.74
LDLR-203ENST00000535915 GPR6P46095 362 aaPredicted RBP10.43□□□□□ -0.74
LDLR-203ENST00000535915 KLRD1Q13241 179 aa10.43□□□□□ -0.74
LDLR-203ENST00000535915 UBE2V1Q13404 147 aa10.43□□□□□ -0.74
LDLR-203ENST00000535915 OTORQ9NRC9 128 aa10.43□□□□□ -0.74
LDLR-203ENST00000535915 ATRXP46100 2492 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 A0A1W2PRD5 423 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 A0A1W2PRF3 423 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 A0A1W2PRM7 423 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 K7EP13 123 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 IGKV1-17P01599 117 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 CEACAM3P40198 252 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 ADORA2A-AS1P86434 159 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 HES1Q14469 280 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 ATP5L2Q7Z4Y8 100 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 EXOC3-AS1Q8N2X6 119 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 OR11H6Q8NGC7 330 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 DAZAP1Q96EP5 407 aaKnown RBP10.42□□□□□ -0.74
LDLR-203ENST00000535915 TMEM14CQ9P0S9 112 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 TRAV8-1A0A0A6YYK1 113 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 A8MWL6 223 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 K7EIM0 57 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 Q6ZN92 141 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 OR4B1Q8NGF8 309 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 OR2D3Q8NGH3 330 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 MRPL27Q9P0M9 148 aaKnown RBP10.42□□□□□ -0.74
LDLR-203ENST00000535915 RAXQ9Y2V3 346 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 WNK2Q9Y3S1 2297 aa10.42□□□□□ -0.74
LDLR-203ENST00000535915 KLRB1Q12918 225 aa10.41□□□□□ -0.74
LDLR-203ENST00000535915 SMIM15Q7Z3B0 74 aa10.41□□□□□ -0.74
LDLR-203ENST00000535915 OR4C5Q8NGB2 326 aa10.41□□□□□ -0.74
LDLR-203ENST00000535915 CFHR4Q92496 578 aa10.41□□□□□ -0.74
LDLR-203ENST00000535915 VPS25Q9BRG1 176 aa10.41□□□□□ -0.74
LDLR-203ENST00000535915 PRSS22Q9GZN4 317 aa10.41□□□□□ -0.74
LDLR-203ENST00000535915 LAMTOR2Q9Y2Q5 125 aa10.41□□□□□ -0.74
LDLR-203ENST00000535915 ASH1LQ9NR48 2969 aaKnown RBP10.41□□□□□ -0.74
LDLR-203ENST00000535915 LOC105371242A0A075B767 164 aa10.41□□□□□ -0.74
LDLR-203ENST00000535915 HNRNPA3P51991 378 aaKnown RBP10.41□□□□□ -0.74
LDLR-203ENST00000535915 PRR31Q5SQ13 230 aa10.41□□□□□ -0.74
LDLR-203ENST00000535915 GOLT1AQ6ZVE7 132 aa10.41□□□□□ -0.74
LDLR-203ENST00000535915 COL6A6A6NMZ7 2263 aa10.4□□□□□ -0.74
LDLR-203ENST00000535915 A0A1B0GXF2 115 aa10.4□□□□□ -0.74
LDLR-203ENST00000535915 C19orf71A6NCJ1 209 aa10.4□□□□□ -0.74
LDLR-203ENST00000535915 SPATA45Q537H7 98 aa10.4□□□□□ -0.74
LDLR-203ENST00000535915 KLF17Q5JT82 389 aaPredicted RBP10.4□□□□□ -0.74
LDLR-203ENST00000535915 Q86TA4 180 aa10.4□□□□□ -0.74
LDLR-203ENST00000535915 NIT1Q86X76 327 aa10.4□□□□□ -0.74
LDLR-203ENST00000535915 Q8N976 141 aa10.4□□□□□ -0.74
LDLR-203ENST00000535915 BORCS7Q96B45 105 aa10.4□□□□□ -0.74
LDLR-203ENST00000535915 ZNF492Q9P255 531 aa10.4□□□□□ -0.74
LDLR-203ENST00000535915 UQCR10Q9UDW1 63 aa10.4□□□□□ -0.74
LDLR-203ENST00000535915 HBBP68871 147 aa10.4□□□□□ -0.74
LDLR-203ENST00000535915 Q6ZVH6 145 aa10.4□□□□□ -0.74
LDLR-203ENST00000535915 PRNTQ86SH4 94 aa10.4□□□□□ -0.74
LDLR-203ENST00000535915 ZNF738Q8NE65 137 aa10.4□□□□□ -0.74
LDLR-203ENST00000535915 GTSF1Q8WW33 167 aa10.4□□□□□ -0.74
LDLR-203ENST00000535915 PGLYRP4Q96LB8 373 aa10.4□□□□□ -0.74
LDLR-203ENST00000535915 S4R3C0 116 aa10.4□□□□□ -0.74
LDLR-203ENST00000535915 HSBP1O75506 76 aa10.39□□□□□ -0.75
LDLR-203ENST00000535915 OR2J3O76001 311 aa10.39□□□□□ -0.75
LDLR-203ENST00000535915 UCNP55089 124 aa10.39□□□□□ -0.75
LDLR-203ENST00000535915 CT83Q5H943 113 aa10.39□□□□□ -0.75
LDLR-203ENST00000535915 BPIFA4PQ86YQ2 179 aa10.39□□□□□ -0.75
LDLR-203ENST00000535915 CIARTQ8N365 385 aaPredicted RBP10.39□□□□□ -0.75
LDLR-203ENST00000535915 NPBQ8NG41 125 aa10.39□□□□□ -0.75
LDLR-203ENST00000535915 M0R1W7 72 aa10.39□□□□□ -0.75
LDLR-203ENST00000535915 NDUFA3O95167 84 aa10.39□□□□□ -0.75
LDLR-203ENST00000535915 IL4P05112 153 aa10.39□□□□□ -0.75
LDLR-203ENST00000535915 C3orf79P0CE67 100 aa10.39□□□□□ -0.75
LDLR-203ENST00000535915 COL8A1P27658 744 aa10.39□□□□□ -0.75
LDLR-203ENST00000535915 OR4F17Q8NGA8 305 aa10.39□□□□□ -0.75
LDLR-203ENST00000535915 C17orf77Q96MU5 243 aa10.39□□□□□ -0.75
LDLR-203ENST00000535915 SHANK2-AS3Q9BTD1 123 aa10.39□□□□□ -0.75
LDLR-203ENST00000535915 SPTBN1Q01082 2364 aaKnown RBP10.39□□□□□ -0.75
LDLR-203ENST00000535915 TMEM11P17152 192 aa10.38□□□□□ -0.75
LDLR-203ENST00000535915 PRTN3P24158 256 aa10.38□□□□□ -0.75
LDLR-203ENST00000535915 KLF5Q13887 457 aaPredicted RBP10.38□□□□□ -0.75
LDLR-203ENST00000535915 FBLN7Q53RD9 439 aa10.38□□□□□ -0.75
LDLR-203ENST00000535915 RNASEKQ6P5S7 137 aaKnown RBP10.38□□□□□ -0.75
LDLR-203ENST00000535915 ZNF491Q8N8L2 437 aa10.38□□□□□ -0.75
LDLR-203ENST00000535915 RNF125Q96EQ8 232 aa10.38□□□□□ -0.75
LDLR-203ENST00000535915 ODF3BA8MYP8 253 aa10.38□□□□□ -0.75
LDLR-203ENST00000535915 H3BRN7 92 aa10.38□□□□□ -0.75
LDLR-203ENST00000535915 C5orf64Q2M2E5 130 aa10.38□□□□□ -0.75
LDLR-203ENST00000535915 C11orf71Q6IPW1 123 aa10.38□□□□□ -0.75
LDLR-203ENST00000535915 UNQ5815/PRO19632Q6UWF5 114 aa10.38□□□□□ -0.75
LDLR-203ENST00000535915 NEU4Q8WWR8 484 aaPredicted RBP10.38□□□□□ -0.75
LDLR-203ENST00000535915 TRBV19A0A075B6N1 114 aa10.37□□□□□ -0.75
LDLR-203ENST00000535915 GNG7O60262 68 aa10.37□□□□□ -0.75
LDLR-203ENST00000535915 IGLV2-11P01706 119 aa10.37□□□□□ -0.75
LDLR-203ENST00000535915 S100A7P31151 101 aa10.37□□□□□ -0.75
LDLR-203ENST00000535915 HINT1P49773 126 aaPredicted RBP10.37□□□□□ -0.75
LDLR-203ENST00000535915 RBPMS2Q6ZRY4 209 aaKnown RBP10.37□□□□□ -0.75
LDLR-203ENST00000535915 GFRA4Q9GZZ7 299 aa10.37□□□□□ -0.75
LDLR-203ENST00000535915 RNF24Q9Y225 148 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms