RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 ATG101Q9BSB4 218 aa10.53□□□□□ -0.72
VPS33B-202ENST00000535906 MLST8Q9BVC4 326 aa10.53□□□□□ -0.72
VPS33B-202ENST00000535906 RPH3ALQ9UNE2 315 aa10.53□□□□□ -0.72
VPS33B-202ENST00000535906 CELSR1Q9NYQ6 3014 aa10.52□□□□□ -0.72
VPS33B-202ENST00000535906 IGLV11-55A0A075B6I3 123 aa10.52□□□□□ -0.73
VPS33B-202ENST00000535906 A0A1W2PS18 150 aa10.52□□□□□ -0.73
VPS33B-202ENST00000535906 NPIPB5A8MRT5 1133 aa10.52□□□□□ -0.73
VPS33B-202ENST00000535906 C5orf17Q8NAS9 161 aa10.52□□□□□ -0.73
VPS33B-202ENST00000535906 TMEM68Q96MH6 324 aa10.52□□□□□ -0.73
VPS33B-202ENST00000535906 Q9H3A6 140 aa10.52□□□□□ -0.73
VPS33B-202ENST00000535906 ZNF586Q9NXT0 402 aa10.52□□□□□ -0.73
VPS33B-202ENST00000535906 TBL2Q9Y4P3 447 aaKnown RBP10.52□□□□□ -0.73
VPS33B-202ENST00000535906 FLNCQ14315 2725 aa10.52□□□□□ -0.73
VPS33B-202ENST00000535906 IGHV4-39P01824 125 aa10.52□□□□□ -0.73
VPS33B-202ENST00000535906 TTC9CQ8N5M4 171 aa10.52□□□□□ -0.73
VPS33B-202ENST00000535906 ZNF491Q8N8L2 437 aa10.52□□□□□ -0.73
VPS33B-202ENST00000535906 VN1R17PQ8TDU5 208 aa10.52□□□□□ -0.73
VPS33B-202ENST00000535906 C20orf144Q9BQM9 153 aa10.52□□□□□ -0.73
VPS33B-202ENST00000535906 FBXL7Q9UJT9 491 aa10.52□□□□□ -0.73
VPS33B-202ENST00000535906 HIGD1CA8MV81 97 aa10.51□□□□□ -0.73
VPS33B-202ENST00000535906 TOMM40O96008 361 aa10.51□□□□□ -0.73
VPS33B-202ENST00000535906 EGR2P11161 476 aaPredicted RBP10.51□□□□□ -0.73
VPS33B-202ENST00000535906 SAA4P35542 130 aa10.51□□□□□ -0.73
VPS33B-202ENST00000535906 AMTP48728 403 aa10.51□□□□□ -0.73
VPS33B-202ENST00000535906 TDRG1Q3Y452 100 aa10.51□□□□□ -0.73
VPS33B-202ENST00000535906 Q8N9W7 124 aa10.51□□□□□ -0.73
VPS33B-202ENST00000535906 FMC1Q96HJ9 113 aa10.51□□□□□ -0.73
VPS33B-202ENST00000535906 NEU1Q99519 415 aa10.51□□□□□ -0.73
VPS33B-202ENST00000535906 LPAR2Q9HBW0 351 aa10.51□□□□□ -0.73
VPS33B-202ENST00000535906 NRN1Q9NPD7 142 aa10.51□□□□□ -0.73
VPS33B-202ENST00000535906 IGHV7-81A0A0B4J1V7 117 aa10.5□□□□□ -0.73
VPS33B-202ENST00000535906 F8W735 103 aaPredicted RBP10.5□□□□□ -0.73
VPS33B-202ENST00000535906 EREGO14944 169 aa10.5□□□□□ -0.73
VPS33B-202ENST00000535906 ZNF324O75467 553 aaPredicted RBP10.5□□□□□ -0.73
VPS33B-202ENST00000535906 SSTP61278 116 aa10.5□□□□□ -0.73
VPS33B-202ENST00000535906 GDF5OSQ5U4N7 250 aa10.5□□□□□ -0.73
VPS33B-202ENST00000535906 ATP5L2Q7Z4Y8 100 aa10.5□□□□□ -0.73
VPS33B-202ENST00000535906 BCL6BQ8N143 479 aaPredicted RBP10.5□□□□□ -0.73
VPS33B-202ENST00000535906 TMEM14CQ9P0S9 112 aa10.5□□□□□ -0.73
VPS33B-202ENST00000535906 RNF114Q9Y508 228 aa10.5□□□□□ -0.73
VPS33B-202ENST00000535906 GNG7O60262 68 aa10.5□□□□□ -0.73
VPS33B-202ENST00000535906 LTAP01374 205 aa10.5□□□□□ -0.73
VPS33B-202ENST00000535906 TCRAP04437 139 aa10.5□□□□□ -0.73
VPS33B-202ENST00000535906 IL4P05112 153 aa10.5□□□□□ -0.73
VPS33B-202ENST00000535906 FAM106CPP0CH98 169 aa10.5□□□□□ -0.73
VPS33B-202ENST00000535906 C18orf32Q8TCD1 76 aa10.5□□□□□ -0.73
VPS33B-202ENST00000535906 RNF125Q96EQ8 232 aa10.5□□□□□ -0.73
VPS33B-202ENST00000535906 SHANK2-AS3Q9BTD1 123 aa10.5□□□□□ -0.73
VPS33B-202ENST00000535906 PMCHP20382 165 aa10.49□□□□□ -0.73
VPS33B-202ENST00000535906 EXOC3-AS1Q8N2X6 119 aa10.49□□□□□ -0.73
VPS33B-202ENST00000535906 PIP4P2Q8N4L2 257 aa10.49□□□□□ -0.73
VPS33B-202ENST00000535906 VAMP8Q9BV40 100 aa10.49□□□□□ -0.73
VPS33B-202ENST00000535906 SNHG12Q9BXW3 62 aa10.49□□□□□ -0.73
VPS33B-202ENST00000535906 PRSS22Q9GZN4 317 aa10.49□□□□□ -0.73
VPS33B-202ENST00000535906 ACACBO00763 2458 aa10.49□□□□□ -0.73
VPS33B-202ENST00000535906 CACNA1BQ00975 2339 aa10.49□□□□□ -0.73
VPS33B-202ENST00000535906 H3BRN7 92 aa10.49□□□□□ -0.73
VPS33B-202ENST00000535906 NDUFB8O95169 186 aa10.49□□□□□ -0.73
VPS33B-202ENST00000535906 RNF224P0DH78 156 aa10.49□□□□□ -0.73
VPS33B-202ENST00000535906 MFAP4P55083 255 aa10.49□□□□□ -0.73
VPS33B-202ENST00000535906 KRTDAPP60985 99 aa10.49□□□□□ -0.73
VPS33B-202ENST00000535906 CT83Q5H943 113 aa10.49□□□□□ -0.73
VPS33B-202ENST00000535906 Q8N976 141 aa10.49□□□□□ -0.73
VPS33B-202ENST00000535906 C17orf77Q96MU5 243 aa10.49□□□□□ -0.73
VPS33B-202ENST00000535906 RPP21Q9H633 154 aaKnown RBP10.49□□□□□ -0.73
VPS33B-202ENST00000535906 ZNF492Q9P255 531 aa10.49□□□□□ -0.73
VPS33B-202ENST00000535906 ABCA2Q9BZC7 2435 aa10.49□□□□□ -0.73
VPS33B-202ENST00000535906 A0A1B0GXF2 115 aa10.48□□□□□ -0.73
VPS33B-202ENST00000535906 WI2-2373I1.2A0A1W2PRP0 233 aa10.48□□□□□ -0.73
VPS33B-202ENST00000535906 M0R143 59 aa10.48□□□□□ -0.73
VPS33B-202ENST00000535906 OR2J3O76001 311 aa10.48□□□□□ -0.73
VPS33B-202ENST00000535906 IGHV3-23P01764 117 aa10.48□□□□□ -0.73
VPS33B-202ENST00000535906 LINC00322Q6ZN03 302 aaPredicted RBP10.48□□□□□ -0.73
VPS33B-202ENST00000535906 OTORQ9NRC9 128 aa10.48□□□□□ -0.73
VPS33B-202ENST00000535906 PAM16Q9Y3D7 125 aa10.48□□□□□ -0.73
VPS33B-202ENST00000535906 C19orf71A6NCJ1 209 aa10.48□□□□□ -0.73
VPS33B-202ENST00000535906 VWC2LB2RUY7 222 aa10.48□□□□□ -0.73
VPS33B-202ENST00000535906 DIRC3C9JPN6 131 aa10.48□□□□□ -0.73
VPS33B-202ENST00000535906 RAB4AP20338 218 aa10.48□□□□□ -0.73
VPS33B-202ENST00000535906 BPIFA4PQ86YQ2 179 aa10.48□□□□□ -0.73
VPS33B-202ENST00000535906 MIEN1Q9BRT3 115 aa10.48□□□□□ -0.73
VPS33B-202ENST00000535906 MAP1AP78559 2803 aaPredicted RBP10.47□□□□□ -0.73
VPS33B-202ENST00000535906 TRAV30A0A087WSZ9 112 aa10.47□□□□□ -0.73
VPS33B-202ENST00000535906 FCGR2BP31994 310 aaPredicted RBP10.47□□□□□ -0.73
VPS33B-202ENST00000535906 KLF5Q13887 457 aaPredicted RBP10.47□□□□□ -0.73
VPS33B-202ENST00000535906 Q56UQ5 140 aa10.47□□□□□ -0.73
VPS33B-202ENST00000535906 NIT1Q86X76 327 aa10.47□□□□□ -0.73
VPS33B-202ENST00000535906 ZNF48Q96MX3 618 aaPredicted RBP10.47□□□□□ -0.73
VPS33B-202ENST00000535906 C21orf62Q9NYP8 219 aa10.47□□□□□ -0.73
VPS33B-202ENST00000535906 C1RLQ9NZP8 487 aa10.47□□□□□ -0.73
VPS33B-202ENST00000535906 USP9XQ93008 2570 aaPredicted RBP10.47□□□□□ -0.73
VPS33B-202ENST00000535906 TRBV19A0A075B6N1 114 aa10.47□□□□□ -0.73
VPS33B-202ENST00000535906 TRAV8-1A0A0A6YYK1 113 aa10.47□□□□□ -0.73
VPS33B-202ENST00000535906 CENPVL3A0A0U1RRI6 287 aa10.47□□□□□ -0.73
VPS33B-202ENST00000535906 A8MWL6 223 aa10.47□□□□□ -0.73
VPS33B-202ENST00000535906 P01737 135 aa10.47□□□□□ -0.73
VPS33B-202ENST00000535906 HLA-DRB1P01911 266 aa10.47□□□□□ -0.73
VPS33B-202ENST00000535906 IGLC2P0DOY2 106 aa10.47□□□□□ -0.73
VPS33B-202ENST00000535906 NUTF2P61970 127 aaKnown RBP10.47□□□□□ -0.73
VPS33B-202ENST00000535906 OR4B1Q8NGF8 309 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms