RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 PITX3O75364 302 aa9.49□□□□□ -0.89
CLSTN3-205ENST00000535452 PPP1R1AQ13522 171 aa9.49□□□□□ -0.89
CLSTN3-205ENST00000535452 LGALS9BQ3B8N2 356 aa9.49□□□□□ -0.89
CLSTN3-205ENST00000535452 RNF212Q495C1 297 aa9.49□□□□□ -0.89
CLSTN3-205ENST00000535452 ACOT7LQ6ZUV0 252 aa9.49□□□□□ -0.89
CLSTN3-205ENST00000535452 PSENENQ9NZ42 101 aa9.49□□□□□ -0.89
CLSTN3-205ENST00000535452 AGRNO00468 2067 aa9.48□□□□□ -0.89
CLSTN3-205ENST00000535452 LYRM9A8MSI8 78 aa9.48□□□□□ -0.89
CLSTN3-205ENST00000535452 F6UB75 175 aa9.48□□□□□ -0.89
CLSTN3-205ENST00000535452 SCGB1D2O95969 90 aa9.48□□□□□ -0.89
CLSTN3-205ENST00000535452 C4orf46Q504U0 113 aa9.48□□□□□ -0.89
CLSTN3-205ENST00000535452 CYP2G1PQ6ZSU1 146 aa9.48□□□□□ -0.89
CLSTN3-205ENST00000535452 TMEM144Q7Z5S9 345 aa9.48□□□□□ -0.89
CLSTN3-205ENST00000535452 TMEM256Q8N2U0 113 aa9.48□□□□□ -0.89
CLSTN3-205ENST00000535452 OR10P1Q8NGE3 313 aa9.48□□□□□ -0.89
CLSTN3-205ENST00000535452 IGLV2-18A0A075B6J9 118 aa9.47□□□□□ -0.89
CLSTN3-205ENST00000535452 SOCS3O14543 225 aa9.47□□□□□ -0.89
CLSTN3-205ENST00000535452 SSSCA1O60232 199 aa9.47□□□□□ -0.89
CLSTN3-205ENST00000535452 ADAP1O75689 374 aa9.47□□□□□ -0.89
CLSTN3-205ENST00000535452 LINC00869P0C866 280 aa9.47□□□□□ -0.89
CLSTN3-205ENST00000535452 CNN1P51911 297 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-205ENST00000535452 FAM3BP58499 235 aaPredicted RBP9.47□□□□□ -0.89
CLSTN3-205ENST00000535452 RAB31Q13636 194 aa9.47□□□□□ -0.89
CLSTN3-205ENST00000535452 ZNF846Q147U1 533 aa9.47□□□□□ -0.89
CLSTN3-205ENST00000535452 ZNF709Q8N972 641 aa9.47□□□□□ -0.89
CLSTN3-205ENST00000535452 LINC01587Q99440 93 aa9.47□□□□□ -0.89
CLSTN3-205ENST00000535452 L7N2F9 121 aa9.46□□□□□ -0.9
CLSTN3-205ENST00000535452 GOSR2O14653 212 aa9.46□□□□□ -0.9
CLSTN3-205ENST00000535452 HTN1P15515 57 aa9.46□□□□□ -0.9
CLSTN3-205ENST00000535452 DEFB1P60022 68 aa9.46□□□□□ -0.9
CLSTN3-205ENST00000535452 VAMP2P63027 116 aa9.46□□□□□ -0.9
CLSTN3-205ENST00000535452 HIST1H1AQ02539 215 aaPredicted RBP9.46□□□□□ -0.9
CLSTN3-205ENST00000535452 SPINK13Q1W4C9 94 aa9.46□□□□□ -0.9
CLSTN3-205ENST00000535452 CNPY1Q3B7I2 92 aa9.46□□□□□ -0.9
CLSTN3-205ENST00000535452 PXDC1Q5TGL8 231 aa9.46□□□□□ -0.9
CLSTN3-205ENST00000535452 SOSTQ9BQB4 213 aa9.46□□□□□ -0.9
CLSTN3-205ENST00000535452 SLC25A39Q9BZJ4 359 aaPredicted RBP9.46□□□□□ -0.9
CLSTN3-205ENST00000535452 NPVFQ9HCQ7 196 aa9.46□□□□□ -0.9
CLSTN3-205ENST00000535452 F5H768 121 aa9.45□□□□□ -0.9
CLSTN3-205ENST00000535452 BOLA2-SMG1P6H3BVE0 249 aa9.45□□□□□ -0.9
CLSTN3-205ENST00000535452 DEFB130BP0DP73 79 aa9.45□□□□□ -0.9
CLSTN3-205ENST00000535452 DEFB130AP0DP74 79 aa9.45□□□□□ -0.9
CLSTN3-205ENST00000535452 MED14OSP0DP75 135 aa9.45□□□□□ -0.9
CLSTN3-205ENST00000535452 GATA2P23769 480 aaPredicted RBP9.45□□□□□ -0.9
CLSTN3-205ENST00000535452 TSPOP30536 169 aa9.45□□□□□ -0.9
CLSTN3-205ENST00000535452 CCL18P55774 89 aa9.45□□□□□ -0.9
CLSTN3-205ENST00000535452 CLINT1Q14677 625 aa9.45□□□□□ -0.9
CLSTN3-205ENST00000535452 C1orf134Q5TEV5 83 aa9.45□□□□□ -0.9
CLSTN3-205ENST00000535452 TMEM88Q6PEY1 159 aa9.45□□□□□ -0.9
CLSTN3-205ENST00000535452 TEPPQ6URK8 271 aa9.45□□□□□ -0.9
CLSTN3-205ENST00000535452 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.45□□□□□ -0.9
CLSTN3-205ENST00000535452 ZNF546Q86UE3 836 aa9.45□□□□□ -0.9
CLSTN3-205ENST00000535452 CCDC28AQ8IWP9 274 aa9.45□□□□□ -0.9
CLSTN3-205ENST00000535452 TRIM63Q969Q1 353 aa9.45□□□□□ -0.9
CLSTN3-205ENST00000535452 C16orf74Q96GX8 76 aa9.45□□□□□ -0.9
CLSTN3-205ENST00000535452 SHANK2-AS3Q9BTD1 123 aa9.45□□□□□ -0.9
CLSTN3-205ENST00000535452 ARL6Q9H0F7 186 aa9.45□□□□□ -0.9
CLSTN3-205ENST00000535452 IGKV1OR2-108A0A075B7D4 117 aa9.44□□□□□ -0.9
CLSTN3-205ENST00000535452 C9orf170A2RU37 121 aa9.44□□□□□ -0.9
CLSTN3-205ENST00000535452 M0R2Z0 102 aa9.44□□□□□ -0.9
CLSTN3-205ENST00000535452 NUDT3O95989 172 aa9.44□□□□□ -0.9
CLSTN3-205ENST00000535452 ATP5G1P05496 136 aa9.44□□□□□ -0.9
CLSTN3-205ENST00000535452 ATP5G3P48201 142 aa9.44□□□□□ -0.9
CLSTN3-205ENST00000535452 RRAS2P62070 204 aaPredicted RBP9.44□□□□□ -0.9
CLSTN3-205ENST00000535452 POLR2GP62487 172 aaKnown RBP eCLIP9.44□□□□□ -0.9
CLSTN3-205ENST00000535452 DLK1P80370 383 aa9.44□□□□□ -0.9
CLSTN3-205ENST00000535452 LCN15Q6UWW0 184 aa9.44□□□□□ -0.9
CLSTN3-205ENST00000535452 Q6ZRG5 221 aa9.44□□□□□ -0.9
CLSTN3-205ENST00000535452 C1orf158Q8N1D5 194 aa9.44□□□□□ -0.9
CLSTN3-205ENST00000535452 OR11H7Q8NGC8 314 aa9.44□□□□□ -0.9
CLSTN3-205ENST00000535452 OR10J6PQ8NGY7 276 aa9.44□□□□□ -0.9
CLSTN3-205ENST00000535452 SMIM8Q96KF7 97 aa9.44□□□□□ -0.9
CLSTN3-205ENST00000535452 SLC50A1Q9BRV3 221 aa9.44□□□□□ -0.9
CLSTN3-205ENST00000535452 SCRT1Q9BWW7 348 aa9.44□□□□□ -0.9
CLSTN3-205ENST00000535452 GSKIPQ9P0R6 139 aa9.44□□□□□ -0.9
CLSTN3-205ENST00000535452 ZNF705GA8MUZ8 300 aaPredicted RBP9.43□□□□□ -0.9
CLSTN3-205ENST00000535452 FNDC10F2Z333 226 aa9.43□□□□□ -0.9
CLSTN3-205ENST00000535452 H3BRN7 92 aa9.43□□□□□ -0.9
CLSTN3-205ENST00000535452 COX7A2P2O60397 106 aa9.43□□□□□ -0.9
CLSTN3-205ENST00000535452 OR4E1P0C645 316 aa9.43□□□□□ -0.9
CLSTN3-205ENST00000535452 CXCL2P19875 107 aa9.43□□□□□ -0.9
CLSTN3-205ENST00000535452 PVALBP20472 110 aaPredicted RBP9.43□□□□□ -0.9
CLSTN3-205ENST00000535452 TAS2R60P59551 318 aa9.43□□□□□ -0.9
CLSTN3-205ENST00000535452 ID3Q02535 119 aa9.43□□□□□ -0.9
CLSTN3-205ENST00000535452 IAH1Q2TAA2 248 aaPredicted RBP9.43□□□□□ -0.9
CLSTN3-205ENST00000535452 BPIFA4PQ86YQ2 179 aa9.43□□□□□ -0.9
CLSTN3-205ENST00000535452 ARV1Q9H2C2 271 aa9.43□□□□□ -0.9
CLSTN3-205ENST00000535452 V9GYH0 126 aa9.43□□□□□ -0.9
CLSTN3-205ENST00000535452 LINC00854A0A1B0GVQ3 168 aa9.42□□□□□ -0.9
CLSTN3-205ENST00000535452 TSC22D2O75157 780 aa9.42□□□□□ -0.9
CLSTN3-205ENST00000535452 NDUFB6O95139 128 aa9.42□□□□□ -0.9
CLSTN3-205ENST00000535452 METTL15P1P0C7V9 234 aa9.42□□□□□ -0.9
CLSTN3-205ENST00000535452 CDKN1BP46527 198 aa9.42□□□□□ -0.9
CLSTN3-205ENST00000535452 BCAP31P51572 246 aa9.42□□□□□ -0.9
CLSTN3-205ENST00000535452 PSG3Q16557 428 aa9.42□□□□□ -0.9
CLSTN3-205ENST00000535452 ZNF493Q6ZR52 646 aa9.42□□□□□ -0.9
CLSTN3-205ENST00000535452 RNF182Q8N6D2 247 aa9.42□□□□□ -0.9
CLSTN3-205ENST00000535452 OR8A1Q8NGG7 326 aa9.42□□□□□ -0.9
CLSTN3-205ENST00000535452 C20orf173Q96LM9 149 aa9.42□□□□□ -0.9
CLSTN3-205ENST00000535452 GGACTQ9BVM4 153 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms