RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 C10orf113Q5VZT2 155 aa9.77□□□□□ -0.85
TMEM258-202ENST00000535042 RPL7L1Q6DKI1 246 aaKnown RBP9.77□□□□□ -0.85
TMEM258-202ENST00000535042 LINC00305Q7Z4B0 112 aa9.77□□□□□ -0.85
TMEM258-202ENST00000535042 TCTE3Q8IZS6 198 aa9.77□□□□□ -0.85
TMEM258-202ENST00000535042 ZNF709Q8N972 641 aa9.77□□□□□ -0.85
TMEM258-202ENST00000535042 CITED4Q96RK1 184 aa9.77□□□□□ -0.85
TMEM258-202ENST00000535042 TRAV5A0A0B4J249 113 aa9.76□□□□□ -0.85
TMEM258-202ENST00000535042 HMSDA8MTL9 139 aa9.76□□□□□ -0.85
TMEM258-202ENST00000535042 C17orf112F2Z3M2 114 aa9.76□□□□□ -0.85
TMEM258-202ENST00000535042 MRPS12O15235 138 aaKnown RBP9.76□□□□□ -0.85
TMEM258-202ENST00000535042 CXCL2P19875 107 aa9.76□□□□□ -0.85
TMEM258-202ENST00000535042 ZNF124Q15973 351 aa9.76□□□□□ -0.85
TMEM258-202ENST00000535042 HSD17B11Q8NBQ5 300 aa9.76□□□□□ -0.85
TMEM258-202ENST00000535042 OR1L4Q8NGR5 311 aa9.76□□□□□ -0.85
TMEM258-202ENST00000535042 MAP6D1Q9H9H5 199 aa9.76□□□□□ -0.85
TMEM258-202ENST00000535042 NRN1Q9NPD7 142 aa9.76□□□□□ -0.85
TMEM258-202ENST00000535042 CYTL1Q9NRR1 136 aa9.76□□□□□ -0.85
TMEM258-202ENST00000535042 A8MZ25 164 aa9.75□□□□□ -0.85
TMEM258-202ENST00000535042 SOCS3O14543 225 aa9.75□□□□□ -0.85
TMEM258-202ENST00000535042 S100A7P31151 101 aa9.75□□□□□ -0.85
TMEM258-202ENST00000535042 ZNF266Q14584 549 aa9.75□□□□□ -0.85
TMEM258-202ENST00000535042 FFAR4Q5NUL3 377 aa9.75□□□□□ -0.85
TMEM258-202ENST00000535042 SPATA31B1PQ5VZV4 182 aa9.75□□□□□ -0.85
TMEM258-202ENST00000535042 AKAP14Q86UN6 197 aa9.75□□□□□ -0.85
TMEM258-202ENST00000535042 APRG1Q8IVJ8 170 aa9.75□□□□□ -0.85
TMEM258-202ENST00000535042 KCNRGQ8N5I3 272 aa9.75□□□□□ -0.85
TMEM258-202ENST00000535042 GATAD1Q8WUU5 269 aa9.75□□□□□ -0.85
TMEM258-202ENST00000535042 PFDN5Q99471 154 aa9.75□□□□□ -0.85
TMEM258-202ENST00000535042 KCNIP2Q9NS61 270 aa9.75□□□□□ -0.85
TMEM258-202ENST00000535042 FRMD6-AS1P0C7T7 363 aa9.74□□□□□ -0.85
TMEM258-202ENST00000535042 ZNF688P0C7X2 276 aa9.74□□□□□ -0.85
TMEM258-202ENST00000535042 RPL7P18124 248 aaKnown RBP9.74□□□□□ -0.85
TMEM258-202ENST00000535042 ATP6V0CP27449 155 aa9.74□□□□□ -0.85
TMEM258-202ENST00000535042 GALR1P47211 349 aa9.74□□□□□ -0.85
TMEM258-202ENST00000535042 DEFB131AP59861 70 aa9.74□□□□□ -0.85
TMEM258-202ENST00000535042 ZNF345Q14585 488 aa9.74□□□□□ -0.85
TMEM258-202ENST00000535042 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.74□□□□□ -0.85
TMEM258-202ENST00000535042 LINC00322Q6ZN03 302 aaPredicted RBP9.74□□□□□ -0.85
TMEM258-202ENST00000535042 GPR82Q96P67 336 aa9.74□□□□□ -0.85
TMEM258-202ENST00000535042 FAM110AQ9BQ89 295 aa9.74□□□□□ -0.85
TMEM258-202ENST00000535042 SRD5A3Q9H8P0 318 aa9.74□□□□□ -0.85
TMEM258-202ENST00000535042 SEPSECSQ9HD40 501 aaKnown RBP9.74□□□□□ -0.85
TMEM258-202ENST00000535042 TIMM9Q9Y5J7 89 aa9.74□□□□□ -0.85
TMEM258-202ENST00000535042 RBMY1BA6NDE4 496 aaKnown RBP9.73□□□□□ -0.85
TMEM258-202ENST00000535042 RBMY1EA6NEQ0 496 aaKnown RBP9.73□□□□□ -0.85
TMEM258-202ENST00000535042 SNRPCP09234 159 aaKnown RBP9.73□□□□□ -0.85
TMEM258-202ENST00000535042 RBMY1DP0C7P1 496 aaKnown RBP9.73□□□□□ -0.85
TMEM258-202ENST00000535042 FAM78BQ5VT40 261 aa9.73□□□□□ -0.85
TMEM258-202ENST00000535042 MIR17HGQ75NE6 70 aa9.73□□□□□ -0.85
TMEM258-202ENST00000535042 S100A7AQ86SG5 101 aa9.73□□□□□ -0.85
TMEM258-202ENST00000535042 SH3BGRL3Q9H299 93 aa9.73□□□□□ -0.85
TMEM258-202ENST00000535042 TUBA4BQ9H853 241 aa9.73□□□□□ -0.85
TMEM258-202ENST00000535042 BORCS7-ASMTA0A0B4J1R7 106 aa9.72□□□□□ -0.85
TMEM258-202ENST00000535042 TRAV8-2A0A0B4J237 113 aa9.72□□□□□ -0.85
TMEM258-202ENST00000535042 TAAR5O14804 337 aa9.72□□□□□ -0.85
TMEM258-202ENST00000535042 EIF3GO75821 320 aaKnown RBP eCLIP9.72□□□□□ -0.85
TMEM258-202ENST00000535042 C1QBP02746 253 aa9.72□□□□□ -0.85
TMEM258-202ENST00000535042 CMC4P56277 68 aaPredicted RBP9.72□□□□□ -0.85
TMEM258-202ENST00000535042 IGFL4Q6B9Z1 124 aa9.72□□□□□ -0.85
TMEM258-202ENST00000535042 FAM167A-AS1Q96KT0 104 aa9.72□□□□□ -0.85
TMEM258-202ENST00000535042 ASCL2Q99929 193 aa9.72□□□□□ -0.85
TMEM258-202ENST00000535042 ARPC5LQ9BPX5 153 aa9.72□□□□□ -0.85
TMEM258-202ENST00000535042 PSMG3Q9BT73 122 aaPredicted RBP9.72□□□□□ -0.85
TMEM258-202ENST00000535042 A0A087X0K7 114 aa9.71□□□□□ -0.86
TMEM258-202ENST00000535042 A0A0D9SG52 128 aa9.71□□□□□ -0.86
TMEM258-202ENST00000535042 H3BQ15 152 aa9.71□□□□□ -0.86
TMEM258-202ENST00000535042 H3BTX0 84 aa9.71□□□□□ -0.86
TMEM258-202ENST00000535042 IGLC2P0DOY2 106 aa9.71□□□□□ -0.86
TMEM258-202ENST00000535042 ATF4P18848 351 aaPredicted RBP9.71□□□□□ -0.86
TMEM258-202ENST00000535042 DEFB1P60022 68 aa9.71□□□□□ -0.86
TMEM258-202ENST00000535042 RAB2AP61019 212 aa9.71□□□□□ -0.86
TMEM258-202ENST00000535042 LGALSLQ3ZCW2 172 aaPredicted RBP9.71□□□□□ -0.86
TMEM258-202ENST00000535042 PSMG4Q5JS54 123 aa9.71□□□□□ -0.86
TMEM258-202ENST00000535042 BPIFA4PQ86YQ2 179 aa9.71□□□□□ -0.86
TMEM258-202ENST00000535042 SBSPONQ8IVN8 264 aa9.71□□□□□ -0.86
TMEM258-202ENST00000535042 OR2G3Q8NGZ4 309 aa9.71□□□□□ -0.86
TMEM258-202ENST00000535042 C20orf173Q96LM9 149 aa9.71□□□□□ -0.86
TMEM258-202ENST00000535042 B9D2Q9BPU9 175 aa9.71□□□□□ -0.86
TMEM258-202ENST00000535042 SLC25A2Q9BXI2 301 aa9.71□□□□□ -0.86
TMEM258-202ENST00000535042 RNF24Q9Y225 148 aa9.71□□□□□ -0.86
TMEM258-202ENST00000535042 FUT9Q9Y231 359 aa9.71□□□□□ -0.86
TMEM258-202ENST00000535042 KNCNA6PVL3 124 aa9.7□□□□□ -0.86
TMEM258-202ENST00000535042 BCL2L11O43521 198 aa9.7□□□□□ -0.86
TMEM258-202ENST00000535042 JTBO76095 146 aa9.7□□□□□ -0.86
TMEM258-202ENST00000535042 PYYP10082 97 aa9.7□□□□□ -0.86
TMEM258-202ENST00000535042 M6PRP20645 277 aa9.7□□□□□ -0.86
TMEM258-202ENST00000535042 PSMB3P49720 205 aa9.7□□□□□ -0.86
TMEM258-202ENST00000535042 MEOX2P50222 304 aa9.7□□□□□ -0.86
TMEM258-202ENST00000535042 ACOT6Q3I5F7 207 aaPredicted RBP9.7□□□□□ -0.86
TMEM258-202ENST00000535042 TMUB2Q71RG4 321 aa9.7□□□□□ -0.86
TMEM258-202ENST00000535042 C16orf92Q96LL3 132 aa9.7□□□□□ -0.86
TMEM258-202ENST00000535042 LINC00052Q96N35 136 aa9.7□□□□□ -0.86
TMEM258-202ENST00000535042 MRPL32Q9BYC8 188 aaKnown RBP9.7□□□□□ -0.86
TMEM258-202ENST00000535042 ZNF586Q9NXT0 402 aa9.7□□□□□ -0.86
TMEM258-202ENST00000535042 TMEM14CQ9P0S9 112 aa9.7□□□□□ -0.86
TMEM258-202ENST00000535042 SLC17A3O00476 420 aa9.69□□□□□ -0.86
TMEM258-202ENST00000535042 ISLRO14498 428 aa9.69□□□□□ -0.86
TMEM258-202ENST00000535042 HLA-DMBP28068 263 aa9.69□□□□□ -0.86
TMEM258-202ENST00000535042 ID1P41134 155 aa9.69□□□□□ -0.86
TMEM258-202ENST00000535042 SNRPD3P62318 126 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms