RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 MAL2Q969L2 176 aa2.6□□□□□ -1.99
CSMD3-210ENST00000534172 SH3BGRL3Q9H299 93 aa2.6□□□□□ -1.99
CSMD3-210ENST00000534172 MANBALQ9NQG1 85 aa2.6□□□□□ -1.99
CSMD3-210ENST00000534172 MTFP1Q9UDX5 166 aa2.6□□□□□ -1.99
CSMD3-210ENST00000534172 ZNF257Q9Y2Q1 563 aa2.6□□□□□ -1.99
CSMD3-210ENST00000534172 FIS1Q9Y3D6 152 aa2.6□□□□□ -1.99
CSMD3-210ENST00000534172 INSIG2Q9Y5U4 225 aa2.6□□□□□ -1.99
CSMD3-210ENST00000534172 HELZP42694 1942 aaKnown RBP2.59□□□□□ -1.99
CSMD3-210ENST00000534172 MT-ATP8P03928 68 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 GPX1P07203 203 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 LINC00694P0DN24 101 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 CNTFRP26992 372 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 FMODQ06828 376 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 C1orf100Q5SVJ3 147 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 C1orf195Q5TG92 126 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 TSPO2Q5TGU0 170 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 C12orf73Q69YU5 71 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 SLC25A34Q6PIV7 304 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 OOSP2Q86WS3 158 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 C10orf111Q8N326 155 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 TMEM86BQ8N661 226 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 TMEM252Q8N6L7 170 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 OR2T10Q8NGZ9 312 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 OR4K13Q8NH42 304 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 OR9G1Q8NH87 305 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 OR1L1Q8NH94 360 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 JOSD2Q8TAC2 188 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 C18orf32Q8TCD1 76 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 LRRC29Q8WV35 223 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 RDH5Q92781 318 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 NAA38Q9BRA0 125 aaKnown RBP2.59□□□□□ -1.99
CSMD3-210ENST00000534172 SFXN3Q9BWM7 321 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 MS4A6AQ9H2W1 248 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 ACER3Q9NUN7 267 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 RABAC1Q9UI14 185 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 TP53TG1Q9Y2A0 90 aa2.59□□□□□ -1.99
CSMD3-210ENST00000534172 DSPPQ9NZW4 1301 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 ZZEF1O43149 2961 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 SPTA1P02549 2419 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 TRAV9-1A0A075B6T8 112 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 LOC102725191A0A1B0GVB3 256 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 CEACAM18A8MTB9 384 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 SOCS1O15524 211 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 IGKV1D-16P01601 117 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 IGHV3-48P01763 117 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 PFN2P35080 140 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 GZMMP51124 257 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 CACNG7P62955 275 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 EGFEM1PQ0D2K5 195 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 FUT5Q11128 374 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 FAM53BQ14153 422 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 ZNF695Q8IW36 515 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 TMEM256Q8N2U0 113 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 CYB561D1Q8N8Q1 229 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 GATD1Q8NB37 220 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 OR5H2Q8NGV7 314 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 OR10J6PQ8NGY7 276 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 PIFOQ8TCI5 191 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 COMMD5Q9GZQ3 224 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 CST11Q9H112 138 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 HES2Q9Y543 173 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 TRAPPC1Q9Y5R8 145 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 PXMP4Q9Y6I8 212 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 CCDC88CQ9P219 2028 aa2.59□□□□□ -2
CSMD3-210ENST00000534172 EP300Q09472 2414 aaPredicted RBP2.58□□□□□ -2
CSMD3-210ENST00000534172 ANK1P16157 1881 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 DAPL1A0PJW8 107 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 A8MT66 165 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 OR1I1O60431 355 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 CA2P00918 260 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 GYPAP02724 150 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 PRH1P02810 166 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 IGKV5-2P06315 115 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 KLK2P20151 261 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 MYCNOSP40205 109 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 RBM11P57052 281 aaKnown RBP2.58□□□□□ -2
CSMD3-210ENST00000534172 KRTAP10-7P60409 375 aaPredicted RBP2.58□□□□□ -2
CSMD3-210ENST00000534172 DIAPH2-AS1Q14236 149 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 HES1Q14469 280 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 RPL7L1Q6DKI1 246 aaKnown RBP2.58□□□□□ -2
CSMD3-210ENST00000534172 TMEM86AQ8N2M4 240 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 ZFP62Q8NB50 900 aaPredicted RBP2.58□□□□□ -2
CSMD3-210ENST00000534172 SCGB1C1Q8TD33 95 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 RTN4IP1Q8WWV3 396 aaPredicted RBP2.58□□□□□ -2
CSMD3-210ENST00000534172 LINC00477Q96M19 166 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 LINC01587Q99440 93 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 SLC25A39Q9BZJ4 359 aaPredicted RBP2.58□□□□□ -2
CSMD3-210ENST00000534172 XCL2Q9UBD3 114 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 DNAJC15Q9Y5T4 150 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 NCKAP5O14513 1909 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 MIA3Q5JRA6 1907 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 SRRM5B3KS81 715 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 H3BUT2 72 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 ARL6IP5O75915 188 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 CXorf1O96002 111 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 RBMXP38159 391 aaKnown RBP2.58□□□□□ -2
CSMD3-210ENST00000534172 DYNLT1P63172 113 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 ATP5G2Q06055 141 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 KIAA0040Q15053 153 aa2.58□□□□□ -2
CSMD3-210ENST00000534172 IGFBP7Q16270 282 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms