RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 ARV1Q9H2C2 271 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 ENY2Q9NPA8 101 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 ZNF580Q9UK33 172 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 URGCP-MRPS24S4R325 110 aa4.8□□□□□ -1.64
CMTM1-220ENST00000534143 TGIF2-C20orf24A0A0A6YYL0 155 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 NPIPB5A8MRT5 1133 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 PRSS46E5RG02 174 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 SCAF4O95104 1147 aaKnown RBP4.79□□□□□ -1.64
CMTM1-220ENST00000534143 REG1AP05451 166 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 SRP19P09132 144 aaKnown RBP4.79□□□□□ -1.64
CMTM1-220ENST00000534143 SNRPCP09234 159 aaKnown RBP4.79□□□□□ -1.64
CMTM1-220ENST00000534143 APELAP0DMC3 54 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 GZMBP10144 247 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 NPY1RP25929 384 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 RND2P52198 227 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 RPP30P78346 268 aaKnown RBP4.79□□□□□ -1.64
CMTM1-220ENST00000534143 BAXQ07812 192 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 PMS2P11Q13670 270 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 TMEM241Q24JQ0 296 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 C1orf194Q5T5A4 169 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 PET117Q6UWS5 81 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 FAM110DQ8TAY7 271 aaPredicted RBP4.79□□□□□ -1.64
CMTM1-220ENST00000534143 SCGB1C1Q8TD33 95 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 ABHD5Q8WTS1 349 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 YPEL4Q96NS1 127 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 DUX5Q96PT3 197 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 TMEM208Q9BTX3 173 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 PRSS22Q9GZN4 317 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 ZNF702PQ9H963 129 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 WFDC1Q9HC57 220 aa4.79□□□□□ -1.64
CMTM1-220ENST00000534143 F11RQ9Y624 299 aaKnown RBP4.79□□□□□ -1.64
CMTM1-220ENST00000534143 SONP18583 2426 aaKnown RBP4.79□□□□□ -1.64
CMTM1-220ENST00000534143 TRAV41A0A0B4J266 112 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 IFITM10A6NMD0 228 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 C9JQL5 133 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 G3V318 75 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 H7BYZ3 331 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 HMGB3O15347 200 aaKnown RBP4.78□□□□□ -1.64
CMTM1-220ENST00000534143 SOX15O60248 233 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 CST7O76096 145 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 BRI3O95415 125 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 CXCL1P09341 107 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 PPIFP30405 207 aaKnown RBP4.78□□□□□ -1.64
CMTM1-220ENST00000534143 RPL29P47914 159 aaKnown RBP4.78□□□□□ -1.64
CMTM1-220ENST00000534143 SUB1P53999 127 aaKnown RBP eCLIP4.78□□□□□ -1.64
CMTM1-220ENST00000534143 TPPP2P59282 170 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 RPL15P61313 204 aaKnown RBP4.78□□□□□ -1.64
CMTM1-220ENST00000534143 RAB11AP62491 216 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 PAFAH1B2P68402 229 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 CFHR3Q02985 330 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 TMEM267Q0VDI3 215 aaPredicted RBP4.78□□□□□ -1.64
CMTM1-220ENST00000534143 TMEM41BQ5BJD5 291 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 COA6Q5JTJ3 125 aaKnown RBP4.78□□□□□ -1.64
CMTM1-220ENST00000534143 UNQ5815/PRO19632Q6UWF5 114 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 C19orf35Q6ZS72 473 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 ZNF664Q8N3J9 261 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 OR10P1Q8NGE3 313 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 OR1L6Q8NGR2 347 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 FRZBQ92765 325 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 NPFFR1Q9GZQ6 430 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 FNDC4Q9H6D8 234 aaPredicted RBP4.78□□□□□ -1.64
CMTM1-220ENST00000534143 NAT8Q9UHE5 227 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 NAGKQ9UJ70 344 aa4.78□□□□□ -1.64
CMTM1-220ENST00000534143 MXRA5Q9NR99 2828 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 IGLV11-55A0A075B6I3 123 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 TRBV9A0A0B4J1U6 114 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 KIR2DL5BA0A0G2JN68 375 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 KIR2DL5BA0A0G2JPC4 375 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 MAP1LC3B2A6NCE7 125 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 ZNF727A8MUV8 499 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 FNDC10F2Z333 226 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 I3L2K1 104 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 K7EIM0 57 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 TCF21O43680 179 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 AMBPP02760 352 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 MDKP21741 143 aaPredicted RBP4.77□□□□□ -1.65
CMTM1-220ENST00000534143 GALR1P47211 349 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 PTTG1IPP53801 180 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 HBG1P69891 147 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 HBG2P69892 147 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 SLC38A11Q08AI6 406 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 ATP6V1FQ16864 119 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 ECSCRQ19T08 205 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 VWC2Q2TAL6 325 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 TMEM95Q3KNT9 176 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 OR8G2PQ6IF36 304 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 Q6ZSV7 163 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 KIR2DL5AQ8N109 375 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 KLHDC1Q8N7A1 406 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 TMEM217Q8N7C4 229 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 OR5C1Q8NGR4 320 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 CACNG8Q8WXS5 425 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 PINX1Q96BK5 328 aaKnown RBP4.77□□□□□ -1.65
CMTM1-220ENST00000534143 MIEN1Q9BRT3 115 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 ATG101Q9BSB4 218 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 VAMP8Q9BV40 100 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 SNHG12Q9BXW3 62 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 MAP1LC3BQ9GZQ8 125 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 C16orf95Q9H693 158 aa4.77□□□□□ -1.65
CMTM1-220ENST00000534143 SERTAD4Q9NUC0 356 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms