RNA–Protein interactions for RNA: ENST00000534086.1

AP003555.3-201, humanhuman

TSL 4 BASIC

Gene AP003555.3, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.3-201ENST00000534086 C20orf85Q9H1P6 137 aa12.78□□□□□ -0.36
AP003555.3-201ENST00000534086 NPVFQ9HCQ7 196 aa12.78□□□□□ -0.36
AP003555.3-201ENST00000534086 VPS13DQ5THJ4 4388 aa12.77□□□□□ -0.36
AP003555.3-201ENST00000534086 SMIM9A6NGZ8 99 aa12.77□□□□□ -0.37
AP003555.3-201ENST00000534086 HYPMO75409 117 aa12.77□□□□□ -0.37
AP003555.3-201ENST00000534086 C12orf74Q32Q52 190 aa12.77□□□□□ -0.37
AP003555.3-201ENST00000534086 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.77□□□□□ -0.37
AP003555.3-201ENST00000534086 ZNF767PQ75MW2 155 aa12.77□□□□□ -0.37
AP003555.3-201ENST00000534086 MGAT4CQ9UBM8 478 aa12.77□□□□□ -0.37
AP003555.3-201ENST00000534086 HIGD1AQ9Y241 93 aa12.77□□□□□ -0.37
AP003555.3-201ENST00000534086 FNDC10F2Z333 226 aa12.76□□□□□ -0.37
AP003555.3-201ENST00000534086 H3BRN7 92 aa12.76□□□□□ -0.37
AP003555.3-201ENST00000534086 TSC22D2O75157 780 aa12.76□□□□□ -0.37
AP003555.3-201ENST00000534086 TCRBP04435 133 aa12.76□□□□□ -0.37
AP003555.3-201ENST00000534086 OR5G3P0C626 314 aa12.76□□□□□ -0.37
AP003555.3-201ENST00000534086 LINC00869P0C866 280 aa12.76□□□□□ -0.37
AP003555.3-201ENST00000534086 PLP1P60201 277 aa12.76□□□□□ -0.37
AP003555.3-201ENST00000534086 FGL1Q08830 312 aa12.76□□□□□ -0.37
AP003555.3-201ENST00000534086 SHANK2-AS3Q9BTD1 123 aa12.76□□□□□ -0.37
AP003555.3-201ENST00000534086 RCL1Q9Y2P8 373 aaKnown RBP12.76□□□□□ -0.37
AP003555.3-201ENST00000534086 IGHV4-4A0A075B6R2 117 aa12.75□□□□□ -0.37
AP003555.3-201ENST00000534086 DEFB131BA0A096LNP1 70 aa12.75□□□□□ -0.37
AP003555.3-201ENST00000534086 TMEM189A5PLL7 270 aa12.75□□□□□ -0.37
AP003555.3-201ENST00000534086 MBPP02686 304 aaPredicted RBP12.75□□□□□ -0.37
AP003555.3-201ENST00000534086 EMP1P54849 157 aa12.75□□□□□ -0.37
AP003555.3-201ENST00000534086 ZNF846Q147U1 533 aa12.75□□□□□ -0.37
AP003555.3-201ENST00000534086 TEPPQ6URK8 271 aa12.75□□□□□ -0.37
AP003555.3-201ENST00000534086 S100A7AQ86SG5 101 aa12.75□□□□□ -0.37
AP003555.3-201ENST00000534086 GOLT1BQ9Y3E0 138 aa12.75□□□□□ -0.37
AP003555.3-201ENST00000534086 RFNGQ9Y644 331 aa12.75□□□□□ -0.37
AP003555.3-201ENST00000534086 TRAV6A0A075B6T7 132 aa12.74□□□□□ -0.37
AP003555.3-201ENST00000534086 C7orf66A4D0T2 115 aa12.74□□□□□ -0.37
AP003555.3-201ENST00000534086 CCSO14618 274 aa12.74□□□□□ -0.37
AP003555.3-201ENST00000534086 SPART-AS1P0CW21 52 aa12.74□□□□□ -0.37
AP003555.3-201ENST00000534086 RPL7P18124 248 aaKnown RBP12.74□□□□□ -0.37
AP003555.3-201ENST00000534086 PRR20EP86478 221 aa12.74□□□□□ -0.37
AP003555.3-201ENST00000534086 PRR20CP86479 221 aa12.74□□□□□ -0.37
AP003555.3-201ENST00000534086 PRR20DP86480 221 aa12.74□□□□□ -0.37
AP003555.3-201ENST00000534086 PRR20BP86481 221 aa12.74□□□□□ -0.37
AP003555.3-201ENST00000534086 PRR20AP86496 221 aa12.74□□□□□ -0.37
AP003555.3-201ENST00000534086 IGFL4Q6B9Z1 124 aa12.74□□□□□ -0.37
AP003555.3-201ENST00000534086 UHRF2Q96PU4 802 aa12.74□□□□□ -0.37
AP003555.3-201ENST00000534086 RNF126Q9BV68 326 aa12.74□□□□□ -0.37
AP003555.3-201ENST00000534086 ARL6Q9H0F7 186 aa12.74□□□□□ -0.37
AP003555.3-201ENST00000534086 A8MTW9 85 aa12.73□□□□□ -0.37
AP003555.3-201ENST00000534086 FAM25EA8MYX2 175 aa12.73□□□□□ -0.37
AP003555.3-201ENST00000534086 K7EPK0 472 aa12.73□□□□□ -0.37
AP003555.3-201ENST00000534086 L7N2F9 121 aa12.73□□□□□ -0.37
AP003555.3-201ENST00000534086 DUSP14O95147 198 aaKnown RBP12.73□□□□□ -0.37
AP003555.3-201ENST00000534086 VAMP2P63027 116 aa12.73□□□□□ -0.37
AP003555.3-201ENST00000534086 SLC38A11Q08AI6 406 aa12.73□□□□□ -0.37
AP003555.3-201ENST00000534086 ARL16Q0P5N6 197 aa12.73□□□□□ -0.37
AP003555.3-201ENST00000534086 C1orf158Q8N1D5 194 aa12.73□□□□□ -0.37
AP003555.3-201ENST00000534086 GGACTQ9BVM4 153 aa12.73□□□□□ -0.37
AP003555.3-201ENST00000534086 NUDT15Q9NV35 164 aa12.73□□□□□ -0.37
AP003555.3-201ENST00000534086 TRAV8-2A0A0B4J237 113 aa12.72□□□□□ -0.37
AP003555.3-201ENST00000534086 GOSR2O14653 212 aa12.72□□□□□ -0.37
AP003555.3-201ENST00000534086 HBE1P02100 147 aa12.72□□□□□ -0.37
AP003555.3-201ENST00000534086 RNF182Q8N6D2 247 aa12.72□□□□□ -0.37
AP003555.3-201ENST00000534086 ZNF431Q8TF32 576 aaPredicted RBP12.72□□□□□ -0.37
AP003555.3-201ENST00000534086 SEC22CQ9BRL7 303 aa12.72□□□□□ -0.37
AP003555.3-201ENST00000534086 CCDC32Q9BV29 185 aa12.72□□□□□ -0.37
AP003555.3-201ENST00000534086 RNF24Q9Y225 148 aa12.72□□□□□ -0.37
AP003555.3-201ENST00000534086 FRAS1Q86XX4 4008 aa12.72□□□□□ -0.37
AP003555.3-201ENST00000534086 C5orf51A6NDU8 294 aa12.71□□□□□ -0.37
AP003555.3-201ENST00000534086 AGPAT2O15120 278 aa12.71□□□□□ -0.37
AP003555.3-201ENST00000534086 CNN1P51911 297 aaKnown RBP12.71□□□□□ -0.37
AP003555.3-201ENST00000534086 PXDC1Q5TGL8 231 aa12.71□□□□□ -0.37
AP003555.3-201ENST00000534086 AMTNQ6UX39 209 aa12.71□□□□□ -0.37
AP003555.3-201ENST00000534086 PATE2Q6UY27 113 aa12.71□□□□□ -0.37
AP003555.3-201ENST00000534086 ZNF546Q86UE3 836 aa12.71□□□□□ -0.37
AP003555.3-201ENST00000534086 ZNF738Q8NE65 137 aa12.71□□□□□ -0.37
AP003555.3-201ENST00000534086 LRRC20Q8TCA0 184 aa12.71□□□□□ -0.37
AP003555.3-201ENST00000534086 IGF2BP2-AS1Q96M15 143 aa12.71□□□□□ -0.37
AP003555.3-201ENST00000534086 ARV1Q9H2C2 271 aa12.71□□□□□ -0.37
AP003555.3-201ENST00000534086 LSM5Q9Y4Y9 91 aaKnown RBP12.71□□□□□ -0.37
AP003555.3-201ENST00000534086 AMBPP02760 352 aa12.7□□□□□ -0.38
AP003555.3-201ENST00000534086 H2AFB2P0C5Z0 115 aa12.7□□□□□ -0.38
AP003555.3-201ENST00000534086 BCAP31P51572 246 aa12.7□□□□□ -0.38
AP003555.3-201ENST00000534086 RRN3P1Q2M238 152 aa12.7□□□□□ -0.38
AP003555.3-201ENST00000534086 C12orf45Q8N5I9 185 aaPredicted RBP12.7□□□□□ -0.38
AP003555.3-201ENST00000534086 TMEM208Q9BTX3 173 aa12.7□□□□□ -0.38
AP003555.3-201ENST00000534086 DKK2Q9UBU2 259 aa12.7□□□□□ -0.38
AP003555.3-201ENST00000534086 DNAH10Q8IVF4 4471 aa12.69□□□□□ -0.38
AP003555.3-201ENST00000534086 A0A087X0K7 114 aa12.69□□□□□ -0.38
AP003555.3-201ENST00000534086 TEX48A0A1B0GUV7 120 aa12.69□□□□□ -0.38
AP003555.3-201ENST00000534086 LOC102723971A0A1B0GUV8 181 aa12.69□□□□□ -0.38
AP003555.3-201ENST00000534086 SPINK13Q1W4C9 94 aa12.69□□□□□ -0.38
AP003555.3-201ENST00000534086 FAM222AQ5U5X8 452 aa12.69□□□□□ -0.38
AP003555.3-201ENST00000534086 OR11H7Q8NGC8 314 aa12.69□□□□□ -0.38
AP003555.3-201ENST00000534086 C2orf50Q96LR7 162 aa12.69□□□□□ -0.38
AP003555.3-201ENST00000534086 NIPSNAP3BQ9BS92 247 aa12.69□□□□□ -0.38
AP003555.3-201ENST00000534086 NDUFAF3Q9BU61 184 aa12.69□□□□□ -0.38
AP003555.3-201ENST00000534086 DNAH6Q9C0G6 4158 aa12.69□□□□□ -0.38
AP003555.3-201ENST00000534086 FAM240BA0A1B0GVZ2 78 aa12.68□□□□□ -0.38
AP003555.3-201ENST00000534086 M0R2Z0 102 aa12.68□□□□□ -0.38
AP003555.3-201ENST00000534086 CXCL3P19876 107 aa12.68□□□□□ -0.38
AP003555.3-201ENST00000534086 CAV2P51636 162 aa12.68□□□□□ -0.38
AP003555.3-201ENST00000534086 PSG3Q16557 428 aa12.68□□□□□ -0.38
AP003555.3-201ENST00000534086 LINC00305Q7Z4B0 112 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms