RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 MITD1Q8WV92 249 aa11.11□□□□□ -0.63
CPSF1-211ENST00000533492 C20orf173Q96LM9 149 aa11.11□□□□□ -0.63
CPSF1-211ENST00000533492 SCRT1Q9BWW7 348 aa11.11□□□□□ -0.63
CPSF1-211ENST00000533492 SLC25A39Q9BZJ4 359 aaPredicted RBP11.11□□□□□ -0.63
CPSF1-211ENST00000533492 MGAT4CQ9UBM8 478 aa11.11□□□□□ -0.63
CPSF1-211ENST00000533492 HIGD1AQ9Y241 93 aa11.11□□□□□ -0.63
CPSF1-211ENST00000533492 GOLT1BQ9Y3E0 138 aa11.11□□□□□ -0.63
CPSF1-211ENST00000533492 IGHV4-4A0A075B6R2 117 aa11.1□□□□□ -0.63
CPSF1-211ENST00000533492 LYRM1O43325 122 aa11.1□□□□□ -0.63
CPSF1-211ENST00000533492 CCNKO75909 580 aa11.1□□□□□ -0.63
CPSF1-211ENST00000533492 LINC00869P0C866 280 aa11.1□□□□□ -0.63
CPSF1-211ENST00000533492 SPART-AS1P0CW21 52 aa11.1□□□□□ -0.63
CPSF1-211ENST00000533492 TAS2R30P59541 319 aa11.1□□□□□ -0.63
CPSF1-211ENST00000533492 ZNF846Q147U1 533 aa11.1□□□□□ -0.63
CPSF1-211ENST00000533492 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.1□□□□□ -0.63
CPSF1-211ENST00000533492 ZNF709Q8N972 641 aa11.1□□□□□ -0.63
CPSF1-211ENST00000533492 RNF126Q9BV68 326 aa11.1□□□□□ -0.63
CPSF1-211ENST00000533492 C20orf85Q9H1P6 137 aa11.1□□□□□ -0.63
CPSF1-211ENST00000533492 RFNGQ9Y644 331 aa11.1□□□□□ -0.63
CPSF1-211ENST00000533492 FNDC10F2Z333 226 aa11.09□□□□□ -0.63
CPSF1-211ENST00000533492 H3BRN7 92 aa11.09□□□□□ -0.63
CPSF1-211ENST00000533492 PLA2G10O15496 165 aa11.09□□□□□ -0.63
CPSF1-211ENST00000533492 TSC22D2O75157 780 aa11.09□□□□□ -0.63
CPSF1-211ENST00000533492 RPL7P18124 248 aaKnown RBP11.09□□□□□ -0.63
CPSF1-211ENST00000533492 TEPPQ6URK8 271 aa11.09□□□□□ -0.63
CPSF1-211ENST00000533492 SHANK2-AS3Q9BTD1 123 aa11.09□□□□□ -0.63
CPSF1-211ENST00000533492 BIRC6Q9NR09 4857 aa11.08□□□□□ -0.64
CPSF1-211ENST00000533492 TRAV6A0A075B6T7 132 aa11.08□□□□□ -0.64
CPSF1-211ENST00000533492 L7N2F9 121 aa11.08□□□□□ -0.64
CPSF1-211ENST00000533492 DUSP14O95147 198 aaKnown RBP11.08□□□□□ -0.64
CPSF1-211ENST00000533492 HBE1P02100 147 aa11.08□□□□□ -0.64
CPSF1-211ENST00000533492 TCRBP04435 133 aa11.08□□□□□ -0.64
CPSF1-211ENST00000533492 PLP1P60201 277 aa11.08□□□□□ -0.64
CPSF1-211ENST00000533492 VAMP2P63027 116 aa11.08□□□□□ -0.64
CPSF1-211ENST00000533492 PRR20EP86478 221 aa11.08□□□□□ -0.64
CPSF1-211ENST00000533492 PRR20CP86479 221 aa11.08□□□□□ -0.64
CPSF1-211ENST00000533492 PRR20DP86480 221 aa11.08□□□□□ -0.64
CPSF1-211ENST00000533492 PRR20BP86481 221 aa11.08□□□□□ -0.64
CPSF1-211ENST00000533492 PRR20AP86496 221 aa11.08□□□□□ -0.64
CPSF1-211ENST00000533492 IGFL4Q6B9Z1 124 aa11.08□□□□□ -0.64
CPSF1-211ENST00000533492 LRRC20Q8TCA0 184 aa11.08□□□□□ -0.64
CPSF1-211ENST00000533492 C17orf77Q96MU5 243 aa11.08□□□□□ -0.64
CPSF1-211ENST00000533492 TMEM208Q9BTX3 173 aa11.08□□□□□ -0.64
CPSF1-211ENST00000533492 ARL6Q9H0F7 186 aa11.08□□□□□ -0.64
CPSF1-211ENST00000533492 RNF24Q9Y225 148 aa11.08□□□□□ -0.64
CPSF1-211ENST00000533492 KMT2AQ03164 3969 aa11.07□□□□□ -0.64
CPSF1-211ENST00000533492 FAM25EA8MYX2 175 aa11.07□□□□□ -0.64
CPSF1-211ENST00000533492 GOSR2O14653 212 aa11.07□□□□□ -0.64
CPSF1-211ENST00000533492 MBPP02686 304 aaPredicted RBP11.07□□□□□ -0.64
CPSF1-211ENST00000533492 SLC38A11Q08AI6 406 aa11.07□□□□□ -0.64
CPSF1-211ENST00000533492 RRN3P1Q2M238 152 aa11.07□□□□□ -0.64
CPSF1-211ENST00000533492 ZNF738Q8NE65 137 aa11.07□□□□□ -0.64
CPSF1-211ENST00000533492 UHRF2Q96PU4 802 aa11.07□□□□□ -0.64
CPSF1-211ENST00000533492 RCL1Q9Y2P8 373 aaKnown RBP11.07□□□□□ -0.64
CPSF1-211ENST00000533492 TRAV8-2A0A0B4J237 113 aa11.06□□□□□ -0.64
CPSF1-211ENST00000533492 TEX48A0A1B0GUV7 120 aa11.06□□□□□ -0.64
CPSF1-211ENST00000533492 C7orf66A4D0T2 115 aa11.06□□□□□ -0.64
CPSF1-211ENST00000533492 C5orf51A6NDU8 294 aa11.06□□□□□ -0.64
CPSF1-211ENST00000533492 CCSO14618 274 aa11.06□□□□□ -0.64
CPSF1-211ENST00000533492 AMBPP02760 352 aa11.06□□□□□ -0.64
CPSF1-211ENST00000533492 BCAP31P51572 246 aa11.06□□□□□ -0.64
CPSF1-211ENST00000533492 CNN1P51911 297 aaKnown RBP11.06□□□□□ -0.64
CPSF1-211ENST00000533492 PXDC1Q5TGL8 231 aa11.06□□□□□ -0.64
CPSF1-211ENST00000533492 C1orf158Q8N1D5 194 aa11.06□□□□□ -0.64
CPSF1-211ENST00000533492 RNF182Q8N6D2 247 aa11.06□□□□□ -0.64
CPSF1-211ENST00000533492 IGF2BP2-AS1Q96M15 143 aa11.06□□□□□ -0.64
CPSF1-211ENST00000533492 NDUFAF3Q9BU61 184 aa11.06□□□□□ -0.64
CPSF1-211ENST00000533492 GGACTQ9BVM4 153 aa11.06□□□□□ -0.64
CPSF1-211ENST00000533492 ARV1Q9H2C2 271 aa11.06□□□□□ -0.64
CPSF1-211ENST00000533492 LSM5Q9Y4Y9 91 aaKnown RBP11.06□□□□□ -0.64
CPSF1-211ENST00000533492 LOC102723971A0A1B0GUV8 181 aa11.05□□□□□ -0.64
CPSF1-211ENST00000533492 K7EPK0 472 aa11.05□□□□□ -0.64
CPSF1-211ENST00000533492 ARL16Q0P5N6 197 aa11.05□□□□□ -0.64
CPSF1-211ENST00000533492 FAM222AQ5U5X8 452 aa11.05□□□□□ -0.64
CPSF1-211ENST00000533492 ZNF546Q86UE3 836 aa11.05□□□□□ -0.64
CPSF1-211ENST00000533492 ZNF431Q8TF32 576 aaPredicted RBP11.05□□□□□ -0.64
CPSF1-211ENST00000533492 NIPSNAP3BQ9BS92 247 aa11.05□□□□□ -0.64
CPSF1-211ENST00000533492 NUDT15Q9NV35 164 aa11.05□□□□□ -0.64
CPSF1-211ENST00000533492 DKK2Q9UBU2 259 aa11.05□□□□□ -0.64
CPSF1-211ENST00000533492 A8MTW9 85 aa11.04□□□□□ -0.64
CPSF1-211ENST00000533492 AGPAT2O15120 278 aa11.04□□□□□ -0.64
CPSF1-211ENST00000533492 SPINK13Q1W4C9 94 aa11.04□□□□□ -0.64
CPSF1-211ENST00000533492 AMTNQ6UX39 209 aa11.04□□□□□ -0.64
CPSF1-211ENST00000533492 PATE2Q6UY27 113 aa11.04□□□□□ -0.64
CPSF1-211ENST00000533492 C12orf45Q8N5I9 185 aaPredicted RBP11.04□□□□□ -0.64
CPSF1-211ENST00000533492 OR11H7Q8NGC8 314 aa11.04□□□□□ -0.64
CPSF1-211ENST00000533492 SEC22CQ9BRL7 303 aa11.04□□□□□ -0.64
CPSF1-211ENST00000533492 CCDC32Q9BV29 185 aa11.04□□□□□ -0.64
CPSF1-211ENST00000533492 PPP1R14DQ9NXH3 145 aa11.04□□□□□ -0.64
CPSF1-211ENST00000533492 YTHDF2Q9Y5A9 579 aaKnown RBP11.04□□□□□ -0.64
CPSF1-211ENST00000533492 A0A087X0K7 114 aa11.03□□□□□ -0.64
CPSF1-211ENST00000533492 FAM240BA0A1B0GVZ2 78 aa11.03□□□□□ -0.64
CPSF1-211ENST00000533492 M0R2Z0 102 aa11.03□□□□□ -0.64
CPSF1-211ENST00000533492 COX7A2P2O60397 106 aa11.03□□□□□ -0.64
CPSF1-211ENST00000533492 INSP01308 110 aa11.03□□□□□ -0.64
CPSF1-211ENST00000533492 H2AFB2P0C5Z0 115 aa11.03□□□□□ -0.64
CPSF1-211ENST00000533492 P0DMU3 169 aa11.03□□□□□ -0.64
CPSF1-211ENST00000533492 FAM231AP0DMU4 169 aa11.03□□□□□ -0.64
CPSF1-211ENST00000533492 FAM231CP0DMU5 169 aa11.03□□□□□ -0.64
CPSF1-211ENST00000533492 PVALBP20472 110 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms