RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ELOA3CA0A087WX78 387 aaPredicted RBP8.87□□□□□ -0.99
SSBP3-214ENST00000533209 SOCS3O14543 225 aa8.87□□□□□ -0.99
SSBP3-214ENST00000533209 ZNF688P0C7X2 276 aa8.87□□□□□ -0.99
SSBP3-214ENST00000533209 GALR1P47211 349 aa8.87□□□□□ -0.99
SSBP3-214ENST00000533209 MORN5Q5VZ52 161 aa8.87□□□□□ -0.99
SSBP3-214ENST00000533209 Q6ZNX1 250 aa8.87□□□□□ -0.99
SSBP3-214ENST00000533209 Q6ZRG5 221 aa8.87□□□□□ -0.99
SSBP3-214ENST00000533209 LINC00305Q7Z4B0 112 aa8.87□□□□□ -0.99
SSBP3-214ENST00000533209 S100A7AQ86SG5 101 aa8.87□□□□□ -0.99
SSBP3-214ENST00000533209 SEPSECSQ9HD40 501 aaKnown RBP8.87□□□□□ -0.99
SSBP3-214ENST00000533209 DNAJC4Q9NNZ3 241 aa8.87□□□□□ -0.99
SSBP3-214ENST00000533209 NBEAL2Q6ZNJ1 2754 aa8.86□□□□□ -0.99
SSBP3-214ENST00000533209 FXYD6-FXYD2A0A087WZ82 144 aa8.86□□□□□ -0.99
SSBP3-214ENST00000533209 LOC102724200A0A096LPH7 203 aaPredicted RBP8.86□□□□□ -0.99
SSBP3-214ENST00000533209 RNF222A6NCQ9 220 aa8.86□□□□□ -0.99
SSBP3-214ENST00000533209 MRPS12O15235 138 aaKnown RBP8.86□□□□□ -0.99
SSBP3-214ENST00000533209 IFNA5P01569 189 aa8.86□□□□□ -0.99
SSBP3-214ENST00000533209 C10orf113Q5VZT2 155 aa8.86□□□□□ -0.99
SSBP3-214ENST00000533209 OR1L4Q8NGR5 311 aa8.86□□□□□ -0.99
SSBP3-214ENST00000533209 PFDN5Q99471 154 aa8.86□□□□□ -0.99
SSBP3-214ENST00000533209 TM2D3Q9BRN9 247 aa8.86□□□□□ -0.99
SSBP3-214ENST00000533209 RSG1Q9BU20 258 aa8.86□□□□□ -0.99
SSBP3-214ENST00000533209 PARD6GQ9BYG4 376 aaPredicted RBP8.86□□□□□ -0.99
SSBP3-214ENST00000533209 TNFSF18Q9UNG2 199 aa8.86□□□□□ -0.99
SSBP3-214ENST00000533209 TENM3Q9P273 2699 aa8.85□□□□□ -0.99
SSBP3-214ENST00000533209 SMLR1H3BR10 107 aa8.85□□□□□ -0.99
SSBP3-214ENST00000533209 RPL7P18124 248 aaKnown RBP8.85□□□□□ -0.99
SSBP3-214ENST00000533209 SNRPD3P62318 126 aaKnown RBP8.85□□□□□ -0.99
SSBP3-214ENST00000533209 GCSAMLQ5JQS6 135 aa8.85□□□□□ -0.99
SSBP3-214ENST00000533209 PSMG4Q5JS54 123 aa8.85□□□□□ -0.99
SSBP3-214ENST00000533209 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.85□□□□□ -0.99
SSBP3-214ENST00000533209 ZNF709Q8N972 641 aa8.85□□□□□ -0.99
SSBP3-214ENST00000533209 RNF24Q9Y225 148 aa8.85□□□□□ -0.99
SSBP3-214ENST00000533209 HUWE1Q7Z6Z7 4374 aaKnown RBP8.84□□□□□ -0.99
SSBP3-214ENST00000533209 STAB2Q8WWQ8 2551 aa8.84□□□□□ -0.99
SSBP3-214ENST00000533209 A0A087X0K7 114 aa8.84□□□□□ -0.99
SSBP3-214ENST00000533209 KNCNA6PVL3 124 aa8.84□□□□□ -0.99
SSBP3-214ENST00000533209 C17orf112F2Z3M2 114 aa8.84□□□□□ -0.99
SSBP3-214ENST00000533209 RPL35AP18077 110 aaKnown RBP8.84□□□□□ -0.99
SSBP3-214ENST00000533209 ID1P41134 155 aa8.84□□□□□ -0.99
SSBP3-214ENST00000533209 PSMB3P49720 205 aa8.84□□□□□ -0.99
SSBP3-214ENST00000533209 MEOX2P50222 304 aa8.84□□□□□ -0.99
SSBP3-214ENST00000533209 INO80EQ8NBZ0 244 aaPredicted RBP8.84□□□□□ -0.99
SSBP3-214ENST00000533209 SCGB1C1Q8TD33 95 aa8.84□□□□□ -0.99
SSBP3-214ENST00000533209 GATAD1Q8WUU5 269 aa8.84□□□□□ -0.99
SSBP3-214ENST00000533209 KCNIP2Q9NS61 270 aa8.84□□□□□ -0.99
SSBP3-214ENST00000533209 RFNGQ9Y644 331 aa8.84□□□□□ -0.99
SSBP3-214ENST00000533209 TRAV5A0A0B4J249 113 aa8.83□□□□□ -1
SSBP3-214ENST00000533209 ISLRO14498 428 aa8.83□□□□□ -1
SSBP3-214ENST00000533209 ATF4P18848 351 aaPredicted RBP8.83□□□□□ -1
SSBP3-214ENST00000533209 BPIFA4PQ86YQ2 179 aa8.83□□□□□ -1
SSBP3-214ENST00000533209 SPATA25Q9BR10 227 aa8.83□□□□□ -1
SSBP3-214ENST00000533209 U3KQK5 164 aa8.83□□□□□ -1
SSBP3-214ENST00000533209 TRAV8-2A0A0B4J237 113 aa8.82□□□□□ -1
SSBP3-214ENST00000533209 KIR2DL5BA0A0G2JN68 375 aa8.82□□□□□ -1
SSBP3-214ENST00000533209 KIR2DL5BA0A0G2JPC4 375 aa8.82□□□□□ -1
SSBP3-214ENST00000533209 APOC4P55056 127 aa8.82□□□□□ -1
SSBP3-214ENST00000533209 DEFB1P60022 68 aa8.82□□□□□ -1
SSBP3-214ENST00000533209 ZNF266Q14584 549 aa8.82□□□□□ -1
SSBP3-214ENST00000533209 ACTL10Q5JWF8 245 aa8.82□□□□□ -1
SSBP3-214ENST00000533209 FFAR4Q5NUL3 377 aa8.82□□□□□ -1
SSBP3-214ENST00000533209 SAMD13Q5VXD3 122 aa8.82□□□□□ -1
SSBP3-214ENST00000533209 SPATA31B1PQ5VZV4 182 aa8.82□□□□□ -1
SSBP3-214ENST00000533209 IGFL4Q6B9Z1 124 aa8.82□□□□□ -1
SSBP3-214ENST00000533209 TRPT1Q86TN4 253 aaKnown RBP8.82□□□□□ -1
SSBP3-214ENST00000533209 KIR2DL5AQ8N109 375 aa8.82□□□□□ -1
SSBP3-214ENST00000533209 OR11H4Q8NGC9 324 aa8.82□□□□□ -1
SSBP3-214ENST00000533209 KIR2DL5BQ8NHK3 375 aa8.82□□□□□ -1
SSBP3-214ENST00000533209 C16orf92Q96LL3 132 aa8.82□□□□□ -1
SSBP3-214ENST00000533209 C20orf173Q96LM9 149 aa8.82□□□□□ -1
SSBP3-214ENST00000533209 LINC00052Q96N35 136 aa8.82□□□□□ -1
SSBP3-214ENST00000533209 RCHY1Q96PM5 261 aa8.82□□□□□ -1
SSBP3-214ENST00000533209 ZMAT4Q9H898 229 aa8.82□□□□□ -1
SSBP3-214ENST00000533209 RETNQ9HD89 108 aa8.82□□□□□ -1
SSBP3-214ENST00000533209 ARPC5O15511 151 aa8.81□□□□□ -1
SSBP3-214ENST00000533209 IGLC2P0DOY2 106 aa8.81□□□□□ -1
SSBP3-214ENST00000533209 FAM78BQ5VT40 261 aa8.81□□□□□ -1
SSBP3-214ENST00000533209 STHQ8IWL8 128 aa8.81□□□□□ -1
SSBP3-214ENST00000533209 ST6GAL2Q96JF0 529 aa8.81□□□□□ -1
SSBP3-214ENST00000533209 CSTL1Q9H114 145 aa8.81□□□□□ -1
SSBP3-214ENST00000533209 TIMM9Q9Y5J7 89 aa8.81□□□□□ -1
SSBP3-214ENST00000533209 H3BMM0 161 aa8.8□□□□□ -1
SSBP3-214ENST00000533209 H3BQ15 152 aa8.8□□□□□ -1
SSBP3-214ENST00000533209 H3BTX0 84 aa8.8□□□□□ -1
SSBP3-214ENST00000533209 UBE2CO00762 179 aa8.8□□□□□ -1
SSBP3-214ENST00000533209 SNRPCP09234 159 aaKnown RBP8.8□□□□□ -1
SSBP3-214ENST00000533209 HLA-DRB4P13762 266 aa8.8□□□□□ -1
SSBP3-214ENST00000533209 CXCL2P19875 107 aa8.8□□□□□ -1
SSBP3-214ENST00000533209 GDF5OSQ5U4N7 250 aa8.8□□□□□ -1
SSBP3-214ENST00000533209 RPL7L1Q6DKI1 246 aaKnown RBP8.8□□□□□ -1
SSBP3-214ENST00000533209 LCN15Q6UWW0 184 aa8.8□□□□□ -1
SSBP3-214ENST00000533209 MIR17HGQ75NE6 70 aa8.8□□□□□ -1
SSBP3-214ENST00000533209 RNF182Q8N6D2 247 aa8.8□□□□□ -1
SSBP3-214ENST00000533209 HSD17B11Q8NBQ5 300 aa8.8□□□□□ -1
SSBP3-214ENST00000533209 FAM167A-AS1Q96KT0 104 aa8.8□□□□□ -1
SSBP3-214ENST00000533209 SLC25A2Q9BXI2 301 aa8.8□□□□□ -1
SSBP3-214ENST00000533209 MRPL32Q9BYC8 188 aaKnown RBP8.8□□□□□ -1
SSBP3-214ENST00000533209 MFFQ9GZY8 342 aa8.8□□□□□ -1
SSBP3-214ENST00000533209 HRH4Q9H3N8 390 aa8.8□□□□□ -1
SSBP3-214ENST00000533209 TMEM14CQ9P0S9 112 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms