RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 NUPL2O15504 423 aaKnown RBP8.49□□□□□ -1.05
TRAPPC4-213ENST00000533149 TOMM40O96008 361 aa8.49□□□□□ -1.05
TRAPPC4-213ENST00000533149 PSG1P11464 419 aa8.49□□□□□ -1.05
TRAPPC4-213ENST00000533149 ZNF343Q6P1L6 599 aa8.49□□□□□ -1.05
TRAPPC4-213ENST00000533149 FAM122CQ6P4D5 195 aa8.49□□□□□ -1.05
TRAPPC4-213ENST00000533149 PATE2Q6UY27 113 aa8.49□□□□□ -1.05
TRAPPC4-213ENST00000533149 Q8WTZ3 238 aa8.49□□□□□ -1.05
TRAPPC4-213ENST00000533149 ATP6V0BQ99437 205 aa8.49□□□□□ -1.05
TRAPPC4-213ENST00000533149 ACTR3CQ9C0K3 210 aaPredicted RBP8.49□□□□□ -1.05
TRAPPC4-213ENST00000533149 DNAJC4Q9NNZ3 241 aa8.49□□□□□ -1.05
TRAPPC4-213ENST00000533149 ANKRD34BA5PLL1 514 aa8.48□□□□□ -1.05
TRAPPC4-213ENST00000533149 TGOLN2O43493 480 aa8.48□□□□□ -1.05
TRAPPC4-213ENST00000533149 SCGB2A1O75556 95 aa8.48□□□□□ -1.05
TRAPPC4-213ENST00000533149 H2AFB1P0C5Y9 115 aa8.48□□□□□ -1.05
TRAPPC4-213ENST00000533149 ADMP35318 185 aa8.48□□□□□ -1.05
TRAPPC4-213ENST00000533149 ZNF726P1Q15940 193 aa8.48□□□□□ -1.05
TRAPPC4-213ENST00000533149 PXDC1Q5TGL8 231 aa8.48□□□□□ -1.05
TRAPPC4-213ENST00000533149 SPSB3Q6PJ21 355 aa8.48□□□□□ -1.05
TRAPPC4-213ENST00000533149 MBD3L1Q8WWY6 194 aa8.48□□□□□ -1.05
TRAPPC4-213ENST00000533149 DOK5Q9P104 306 aa8.48□□□□□ -1.05
TRAPPC4-213ENST00000533149 IGHV3-35A0A0C4DH35 117 aa8.47□□□□□ -1.05
TRAPPC4-213ENST00000533149 A0A1W2PPV4 95 aa8.47□□□□□ -1.05
TRAPPC4-213ENST00000533149 PPP5D1E7EU14 171 aa8.47□□□□□ -1.05
TRAPPC4-213ENST00000533149 COX7A2P2O60397 106 aa8.47□□□□□ -1.05
TRAPPC4-213ENST00000533149 HYPMO75409 117 aa8.47□□□□□ -1.05
TRAPPC4-213ENST00000533149 EIF3GO75821 320 aaKnown RBP eCLIP8.47□□□□□ -1.05
TRAPPC4-213ENST00000533149 ORM2P19652 201 aa8.47□□□□□ -1.05
TRAPPC4-213ENST00000533149 ZP3P21754 424 aa8.47□□□□□ -1.05
TRAPPC4-213ENST00000533149 PLP1P60201 277 aa8.47□□□□□ -1.05
TRAPPC4-213ENST00000533149 SPATA31B1PQ5VZV4 182 aa8.47□□□□□ -1.05
TRAPPC4-213ENST00000533149 ZNF600Q6ZNG1 722 aa8.47□□□□□ -1.05
TRAPPC4-213ENST00000533149 OR51G1Q8NGK1 321 aa8.47□□□□□ -1.05
TRAPPC4-213ENST00000533149 OR1L4Q8NGR5 311 aa8.47□□□□□ -1.05
TRAPPC4-213ENST00000533149 OR1B1Q8NGR6 318 aa8.47□□□□□ -1.05
TRAPPC4-213ENST00000533149 SFT2D1Q8WV19 159 aa8.47□□□□□ -1.05
TRAPPC4-213ENST00000533149 TMEM37Q8WXS4 190 aa8.47□□□□□ -1.05
TRAPPC4-213ENST00000533149 RAB24Q969Q5 203 aa8.47□□□□□ -1.05
TRAPPC4-213ENST00000533149 HRH4Q9H3N8 390 aa8.47□□□□□ -1.05
TRAPPC4-213ENST00000533149 CTXND1A0A1B0GTU2 59 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 LCE2BO14633 110 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 OR2C1O95371 312 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 TRBV12-3P01733 135 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 OR5G3P0C626 314 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 ARL3P36405 182 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 CDC34P49427 236 aaPredicted RBP8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 CD81P60033 236 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 LYZP61626 148 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 RHOBP62745 196 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 FAM78BQ5VT40 261 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 C10orf113Q5VZT2 155 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 LCN15Q6UWW0 184 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 TOMM20LQ6UXN7 152 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 SSX7Q7RTT5 188 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 OR9G4Q8NGQ1 327 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 ZNF414Q96IQ9 312 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 PFDN5Q99471 154 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 PBDC1Q9BVG4 233 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 SLC25A22Q9H936 323 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 SEPSECSQ9HD40 501 aaKnown RBP8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 SIGLEC8Q9NYZ4 499 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 MRPL27Q9P0M9 148 aaKnown RBP8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 PEF1Q9UBV8 284 aaKnown RBP8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 FUT9Q9Y231 359 aa8.46□□□□□ -1.06
TRAPPC4-213ENST00000533149 ELOA3CA0A087WX78 387 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC4-213ENST00000533149 TRAV1-1A0A0B4J248 108 aa8.45□□□□□ -1.06
TRAPPC4-213ENST00000533149 A0A1B0GV50 99 aa8.45□□□□□ -1.06
TRAPPC4-213ENST00000533149 LINC00862A6NCI5 91 aa8.45□□□□□ -1.06
TRAPPC4-213ENST00000533149 TEX46H3BTG2 121 aa8.45□□□□□ -1.06
TRAPPC4-213ENST00000533149 HMGB3O15347 200 aaKnown RBP8.45□□□□□ -1.06
TRAPPC4-213ENST00000533149 IL4P05112 153 aa8.45□□□□□ -1.06
TRAPPC4-213ENST00000533149 CCL20P78556 96 aa8.45□□□□□ -1.06
TRAPPC4-213ENST00000533149 RELQ04864 619 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC4-213ENST00000533149 FAM209BQ5JX69 171 aa8.45□□□□□ -1.06
TRAPPC4-213ENST00000533149 MIR17HGQ75NE6 70 aa8.45□□□□□ -1.06
TRAPPC4-213ENST00000533149 LYPD6BQ8NI32 183 aa8.45□□□□□ -1.06
TRAPPC4-213ENST00000533149 RNF2Q99496 336 aa8.45□□□□□ -1.06
TRAPPC4-213ENST00000533149 HIGD1AQ9Y241 93 aa8.45□□□□□ -1.06
TRAPPC4-213ENST00000533149 PUS1Q9Y606 427 aaKnown RBP eCLIP8.45□□□□□ -1.06
TRAPPC4-213ENST00000533149 KMT2AQ03164 3969 aa8.44□□□□□ -1.06
TRAPPC4-213ENST00000533149 TRAV5A0A0B4J249 113 aa8.44□□□□□ -1.06
TRAPPC4-213ENST00000533149 MAP1LC3B2A6NCE7 125 aa8.44□□□□□ -1.06
TRAPPC4-213ENST00000533149 BMPR1BO00238 502 aa8.44□□□□□ -1.06
TRAPPC4-213ENST00000533149 GGCTO75223 188 aaKnown RBP8.44□□□□□ -1.06
TRAPPC4-213ENST00000533149 HBE1P02100 147 aa8.44□□□□□ -1.06
TRAPPC4-213ENST00000533149 FGF8P55075 233 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC4-213ENST00000533149 KLF5Q13887 457 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC4-213ENST00000533149 IL34Q6ZMJ4 242 aa8.44□□□□□ -1.06
TRAPPC4-213ENST00000533149 LINC00336Q6ZUF6 198 aa8.44□□□□□ -1.06
TRAPPC4-213ENST00000533149 SLC7A5P1Q8MH63 180 aa8.44□□□□□ -1.06
TRAPPC4-213ENST00000533149 OR2K2Q8NGT1 345 aa8.44□□□□□ -1.06
TRAPPC4-213ENST00000533149 RNF125Q96EQ8 232 aa8.44□□□□□ -1.06
TRAPPC4-213ENST00000533149 MRPL32Q9BYC8 188 aaKnown RBP8.44□□□□□ -1.06
TRAPPC4-213ENST00000533149 MAP1LC3BQ9GZQ8 125 aa8.44□□□□□ -1.06
TRAPPC4-213ENST00000533149 TECRQ9NZ01 308 aaKnown RBP8.44□□□□□ -1.06
TRAPPC4-213ENST00000533149 HECTD4Q9Y4D8 3996 aa8.43□□□□□ -1.06
TRAPPC4-213ENST00000533149 C8orf88P0DMB2 117 aa8.43□□□□□ -1.06
TRAPPC4-213ENST00000533149 USF2Q15853 346 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC4-213ENST00000533149 NDUFA5Q16718 116 aa8.43□□□□□ -1.06
TRAPPC4-213ENST00000533149 MORN5Q5VZ52 161 aa8.43□□□□□ -1.06
TRAPPC4-213ENST00000533149 LINC00305Q7Z4B0 112 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms