RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 HTN1P15515 57 aa8.08□□□□□ -1.12
CMTM1-216ENST00000533078 BTF3P20290 206 aaKnown RBP8.08□□□□□ -1.12
CMTM1-216ENST00000533078 TAS2R60P59551 318 aa8.08□□□□□ -1.12
CMTM1-216ENST00000533078 RPP30P78346 268 aaKnown RBP8.08□□□□□ -1.12
CMTM1-216ENST00000533078 SRPXP78539 464 aa8.08□□□□□ -1.12
CMTM1-216ENST00000533078 FGL1Q08830 312 aa8.08□□□□□ -1.12
CMTM1-216ENST00000533078 OR5I1Q13606 314 aa8.08□□□□□ -1.12
CMTM1-216ENST00000533078 AMTNQ6UX39 209 aa8.08□□□□□ -1.12
CMTM1-216ENST00000533078 TMEM144Q7Z5S9 345 aa8.08□□□□□ -1.12
CMTM1-216ENST00000533078 S100A7AQ86SG5 101 aa8.08□□□□□ -1.12
CMTM1-216ENST00000533078 BAP18Q8IXM2 172 aa8.08□□□□□ -1.12
CMTM1-216ENST00000533078 ZNF738Q8NE65 137 aa8.08□□□□□ -1.12
CMTM1-216ENST00000533078 GNPNAT1Q96EK6 184 aaPredicted RBP8.08□□□□□ -1.12
CMTM1-216ENST00000533078 C20orf173Q96LM9 149 aa8.08□□□□□ -1.12
CMTM1-216ENST00000533078 SLC25A32Q9H2D1 315 aa8.08□□□□□ -1.12
CMTM1-216ENST00000533078 DMBT1Q9UGM3 2413 aaPredicted RBP8.08□□□□□ -1.12
CMTM1-216ENST00000533078 A0A0B4J2A0 478 aa8.07□□□□□ -1.12
CMTM1-216ENST00000533078 A0A1W2PPQ1 181 aa8.07□□□□□ -1.12
CMTM1-216ENST00000533078 AKAIN1P0CW23 69 aa8.07□□□□□ -1.12
CMTM1-216ENST00000533078 ORM2P19652 201 aa8.07□□□□□ -1.12
CMTM1-216ENST00000533078 FCN2Q15485 313 aa8.07□□□□□ -1.12
CMTM1-216ENST00000533078 FAAP20Q6NZ36 180 aa8.07□□□□□ -1.12
CMTM1-216ENST00000533078 ZNF493Q6ZR52 646 aa8.07□□□□□ -1.12
CMTM1-216ENST00000533078 LRRC20Q8TCA0 184 aa8.07□□□□□ -1.12
CMTM1-216ENST00000533078 FUNDC2Q9BWH2 189 aa8.07□□□□□ -1.12
CMTM1-216ENST00000533078 Q9H3A6 140 aa8.07□□□□□ -1.12
CMTM1-216ENST00000533078 SHPKQ9UHJ6 478 aa8.07□□□□□ -1.12
CMTM1-216ENST00000533078 SCP2D1Q9UJQ7 156 aa8.07□□□□□ -1.12
CMTM1-216ENST00000533078 TRAV12-2A0A075B6T6 113 aa8.06□□□□□ -1.12
CMTM1-216ENST00000533078 RGS5O15539 181 aa8.06□□□□□ -1.12
CMTM1-216ENST00000533078 CRXO43186 299 aaPredicted RBP8.06□□□□□ -1.12
CMTM1-216ENST00000533078 MED6O75586 246 aa8.06□□□□□ -1.12
CMTM1-216ENST00000533078 M6PRP20645 277 aa8.06□□□□□ -1.12
CMTM1-216ENST00000533078 HIST1H1AQ02539 215 aaPredicted RBP8.06□□□□□ -1.12
CMTM1-216ENST00000533078 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.06□□□□□ -1.12
CMTM1-216ENST00000533078 CCDC28AQ8IWP9 274 aa8.06□□□□□ -1.12
CMTM1-216ENST00000533078 THAP8Q8NA92 274 aa8.06□□□□□ -1.12
CMTM1-216ENST00000533078 ZNF503Q96F45 646 aa8.06□□□□□ -1.12
CMTM1-216ENST00000533078 SLC25A39Q9BZJ4 359 aaPredicted RBP8.06□□□□□ -1.12
CMTM1-216ENST00000533078 GPR132Q9UNW8 380 aa8.06□□□□□ -1.12
CMTM1-216ENST00000533078 TRAV26-1A0A087WT03 109 aa8.05□□□□□ -1.12
CMTM1-216ENST00000533078 PRM2P04554 102 aa8.05□□□□□ -1.12
CMTM1-216ENST00000533078 INAFM2P0DMQ5 153 aa8.05□□□□□ -1.12
CMTM1-216ENST00000533078 RPL7P18124 248 aaKnown RBP8.05□□□□□ -1.12
CMTM1-216ENST00000533078 AZU1P20160 251 aa8.05□□□□□ -1.12
CMTM1-216ENST00000533078 RAP2BP61225 183 aa8.05□□□□□ -1.12
CMTM1-216ENST00000533078 DLK1P80370 383 aa8.05□□□□□ -1.12
CMTM1-216ENST00000533078 AKR1C1Q04828 323 aa8.05□□□□□ -1.12
CMTM1-216ENST00000533078 LYZL2Q7Z4W2 148 aa8.05□□□□□ -1.12
CMTM1-216ENST00000533078 CLVS1Q8IUQ0 354 aaPredicted RBP8.05□□□□□ -1.12
CMTM1-216ENST00000533078 TMEM263Q8WUH6 116 aaKnown RBP8.05□□□□□ -1.12
CMTM1-216ENST00000533078 CIB3Q96Q77 187 aaPredicted RBP8.05□□□□□ -1.12
CMTM1-216ENST00000533078 NOP10Q9NPE3 64 aaKnown RBP8.05□□□□□ -1.12
CMTM1-216ENST00000533078 NDUFA13Q9P0J0 144 aa8.05□□□□□ -1.12
CMTM1-216ENST00000533078 RNF24Q9Y225 148 aa8.05□□□□□ -1.12
CMTM1-216ENST00000533078 FAT1Q14517 4588 aa8.05□□□□□ -1.12
CMTM1-216ENST00000533078 SNURFLB1AK76 121 aa8.04□□□□□ -1.12
CMTM1-216ENST00000533078 H7BYZ3 331 aa8.04□□□□□ -1.12
CMTM1-216ENST00000533078 RLN2P04090 185 aa8.04□□□□□ -1.12
CMTM1-216ENST00000533078 IAPPP10997 89 aa8.04□□□□□ -1.12
CMTM1-216ENST00000533078 KRTAP10-2P60368 255 aa8.04□□□□□ -1.12
CMTM1-216ENST00000533078 RNF182Q8N6D2 247 aa8.04□□□□□ -1.12
CMTM1-216ENST00000533078 OR51S1Q8NGJ8 323 aa8.04□□□□□ -1.12
CMTM1-216ENST00000533078 RXFP4Q8TDU9 374 aa8.04□□□□□ -1.12
CMTM1-216ENST00000533078 FRZBQ92765 325 aa8.04□□□□□ -1.12
CMTM1-216ENST00000533078 UHRF2Q96PU4 802 aa8.04□□□□□ -1.12
CMTM1-216ENST00000533078 UPK3BQ9BT76 320 aa8.04□□□□□ -1.12
CMTM1-216ENST00000533078 VPS13BQ7Z7G8 4022 aa8.04□□□□□ -1.12
CMTM1-216ENST00000533078 DUXBA0A1W2PPF3 345 aa8.03□□□□□ -1.12
CMTM1-216ENST00000533078 PLAC8L1A1L4L8 177 aa8.03□□□□□ -1.12
CMTM1-216ENST00000533078 CDKN1BP46527 198 aa8.03□□□□□ -1.12
CMTM1-216ENST00000533078 IGFL4Q6B9Z1 124 aa8.03□□□□□ -1.12
CMTM1-216ENST00000533078 OR8A1Q8NGG7 326 aa8.03□□□□□ -1.12
CMTM1-216ENST00000533078 SMIM4Q8WVI0 70 aa8.03□□□□□ -1.12
CMTM1-216ENST00000533078 C20orf144Q9BQM9 153 aa8.03□□□□□ -1.12
CMTM1-216ENST00000533078 MCUBQ9NWR8 336 aa8.03□□□□□ -1.12
CMTM1-216ENST00000533078 PGPEP1Q9NXJ5 209 aa8.03□□□□□ -1.12
CMTM1-216ENST00000533078 ZNF586Q9NXT0 402 aa8.03□□□□□ -1.12
CMTM1-216ENST00000533078 PRR13Q9NZ81 148 aa8.03□□□□□ -1.12
CMTM1-216ENST00000533078 RABL2AQ9UBK7 228 aaPredicted RBP8.03□□□□□ -1.12
CMTM1-216ENST00000533078 RABL2BQ9UNT1 228 aa8.03□□□□□ -1.12
CMTM1-216ENST00000533078 MRPS16Q9Y3D3 137 aaKnown RBP8.03□□□□□ -1.12
CMTM1-216ENST00000533078 MYCBP2O75592 4640 aa8.02□□□□□ -1.13
CMTM1-216ENST00000533078 IGKV1OR2-108A0A075B7D4 117 aa8.02□□□□□ -1.13
CMTM1-216ENST00000533078 A0A0J9YY99 117 aa8.02□□□□□ -1.13
CMTM1-216ENST00000533078 SMCO3A2RU48 225 aa8.02□□□□□ -1.13
CMTM1-216ENST00000533078 H3BNG1 76 aa8.02□□□□□ -1.13
CMTM1-216ENST00000533078 IL5P05113 134 aa8.02□□□□□ -1.13
CMTM1-216ENST00000533078 ERVFC1-1P60608 527 aa8.02□□□□□ -1.13
CMTM1-216ENST00000533078 IL18Q14116 193 aa8.02□□□□□ -1.13
CMTM1-216ENST00000533078 RNASE8Q8TDE3 154 aaKnown RBP8.02□□□□□ -1.13
CMTM1-216ENST00000533078 HIGD1AQ9Y241 93 aa8.02□□□□□ -1.13
CMTM1-216ENST00000533078 TRAV8-2A0A0B4J237 113 aa8.01□□□□□ -1.13
CMTM1-216ENST00000533078 ZNF701M0R085 212 aaPredicted RBP8.01□□□□□ -1.13
CMTM1-216ENST00000533078 HYPMO75409 117 aa8.01□□□□□ -1.13
CMTM1-216ENST00000533078 IFNA5P01569 189 aa8.01□□□□□ -1.13
CMTM1-216ENST00000533078 GATA2P23769 480 aaPredicted RBP8.01□□□□□ -1.13
CMTM1-216ENST00000533078 PSG3Q16557 428 aa8.01□□□□□ -1.13
CMTM1-216ENST00000533078 CDPF1Q6NVV7 123 aa8.01□□□□□ -1.13
CMTM1-216ENST00000533078 KRTAP1-5Q9BYS1 174 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms