RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 C16orf54Q6UWD8 224 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 DPPA3Q6W0C5 159 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 TCF24Q7RTU0 167 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 TMEM61Q8N0U2 210 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 STPG3Q8N7X2 389 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 WFDC1Q9HC57 220 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 SLC39A9Q9NUM3 307 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 DOK5Q9P104 306 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 RNF24Q9Y225 148 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 HIGD1AQ9Y241 93 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 PXMP4Q9Y6I8 212 aa8.47□□□□□ -1.05
TRAPPC4-211ENST00000533012 ELOA3CA0A087WX78 387 aaPredicted RBP8.46□□□□□ -1.06
TRAPPC4-211ENST00000533012 HELTA6NFD8 242 aa8.46□□□□□ -1.06
TRAPPC4-211ENST00000533012 TSPAN4O14817 238 aa8.46□□□□□ -1.06
TRAPPC4-211ENST00000533012 COX7A2P2O60397 106 aa8.46□□□□□ -1.06
TRAPPC4-211ENST00000533012 SPP1P10451 314 aa8.46□□□□□ -1.06
TRAPPC4-211ENST00000533012 B2MP61769 119 aa8.46□□□□□ -1.06
TRAPPC4-211ENST00000533012 C1orf194Q5T5A4 169 aa8.46□□□□□ -1.06
TRAPPC4-211ENST00000533012 FAM90A2PQ658T7 463 aa8.46□□□□□ -1.06
TRAPPC4-211ENST00000533012 OR1L4Q8NGR5 311 aa8.46□□□□□ -1.06
TRAPPC4-211ENST00000533012 PCNPQ8WW12 178 aaKnown RBP8.46□□□□□ -1.06
TRAPPC4-211ENST00000533012 SPAG8Q99932 426 aaPredicted RBP8.46□□□□□ -1.06
TRAPPC4-211ENST00000533012 PARD6GQ9BYG4 376 aaPredicted RBP8.46□□□□□ -1.06
TRAPPC4-211ENST00000533012 DNAJC4Q9NNZ3 241 aa8.46□□□□□ -1.06
TRAPPC4-211ENST00000533012 KCNIP2Q9NS61 270 aa8.46□□□□□ -1.06
TRAPPC4-211ENST00000533012 IGKV3-7A0A075B6H7 116 aa8.45□□□□□ -1.06
TRAPPC4-211ENST00000533012 ZNF98A6NK75 572 aa8.45□□□□□ -1.06
TRAPPC4-211ENST00000533012 DNASE2O00115 360 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC4-211ENST00000533012 HBE1P02100 147 aa8.45□□□□□ -1.06
TRAPPC4-211ENST00000533012 M6PRP20645 277 aa8.45□□□□□ -1.06
TRAPPC4-211ENST00000533012 DEFA6Q01524 100 aa8.45□□□□□ -1.06
TRAPPC4-211ENST00000533012 C10orf113Q5VZT2 155 aa8.45□□□□□ -1.06
TRAPPC4-211ENST00000533012 PATE2Q6UY27 113 aa8.45□□□□□ -1.06
TRAPPC4-211ENST00000533012 GTSCR1Q86UQ5 136 aa8.45□□□□□ -1.06
TRAPPC4-211ENST00000533012 OR8I2Q8N0Y5 310 aa8.45□□□□□ -1.06
TRAPPC4-211ENST00000533012 GLMPQ8WWB7 406 aa8.45□□□□□ -1.06
TRAPPC4-211ENST00000533012 PRR25Q96S07 402 aa8.45□□□□□ -1.06
TRAPPC4-211ENST00000533012 PFDN5Q99471 154 aa8.45□□□□□ -1.06
TRAPPC4-211ENST00000533012 SLC25A39Q9BZJ4 359 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC4-211ENST00000533012 AURKAIP1Q9NWT8 199 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC4-211ENST00000533012 NOTCH3Q9UM47 2321 aa8.45□□□□□ -1.06
TRAPPC4-211ENST00000533012 OR4C46A6NHA9 309 aa8.44□□□□□ -1.06
TRAPPC4-211ENST00000533012 PRB2P02812 416 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC4-211ENST00000533012 AKR1C8PQ5T2L2 129 aa8.44□□□□□ -1.06
TRAPPC4-211ENST00000533012 SIGLEC15Q6ZMC9 328 aa8.44□□□□□ -1.06
TRAPPC4-211ENST00000533012 LINC00305Q7Z4B0 112 aa8.44□□□□□ -1.06
TRAPPC4-211ENST00000533012 GBGT1Q8N5D6 347 aa8.44□□□□□ -1.06
TRAPPC4-211ENST00000533012 TMEM37Q8WXS4 190 aa8.44□□□□□ -1.06
TRAPPC4-211ENST00000533012 SHANK2-AS3Q9BTD1 123 aa8.44□□□□□ -1.06
TRAPPC4-211ENST00000533012 SMDT1Q9H4I9 107 aa8.44□□□□□ -1.06
TRAPPC4-211ENST00000533012 SLC25A22Q9H936 323 aa8.44□□□□□ -1.06
TRAPPC4-211ENST00000533012 H3BRN7 92 aa8.43□□□□□ -1.06
TRAPPC4-211ENST00000533012 GALR1P47211 349 aa8.43□□□□□ -1.06
TRAPPC4-211ENST00000533012 TFPI2P48307 235 aa8.43□□□□□ -1.06
TRAPPC4-211ENST00000533012 CMC4P56277 68 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC4-211ENST00000533012 PEA15Q15121 130 aa8.43□□□□□ -1.06
TRAPPC4-211ENST00000533012 WFDC3Q8IUB2 231 aa8.43□□□□□ -1.06
TRAPPC4-211ENST00000533012 SVBPQ8N300 66 aa8.43□□□□□ -1.06
TRAPPC4-211ENST00000533012 GATAD1Q8WUU5 269 aa8.43□□□□□ -1.06
TRAPPC4-211ENST00000533012 GPR82Q96P67 336 aa8.43□□□□□ -1.06
TRAPPC4-211ENST00000533012 UHRF2Q96PU4 802 aa8.43□□□□□ -1.06
TRAPPC4-211ENST00000533012 PSMG3Q9BT73 122 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC4-211ENST00000533012 RSG1Q9BU20 258 aa8.43□□□□□ -1.06
TRAPPC4-211ENST00000533012 SCRT1Q9BWW7 348 aa8.43□□□□□ -1.06
TRAPPC4-211ENST00000533012 MS4A6AQ9H2W1 248 aa8.43□□□□□ -1.06
TRAPPC4-211ENST00000533012 TIMM9Q9Y5J7 89 aa8.43□□□□□ -1.06
TRAPPC4-211ENST00000533012 TRAV2A0A0B4J234 112 aa8.42□□□□□ -1.06
TRAPPC4-211ENST00000533012 RPL7P18124 248 aaKnown RBP8.42□□□□□ -1.06
TRAPPC4-211ENST00000533012 CD81P60033 236 aa8.42□□□□□ -1.06
TRAPPC4-211ENST00000533012 SERF2P84101 59 aa8.42□□□□□ -1.06
TRAPPC4-211ENST00000533012 DEFB121Q5J5C9 76 aa8.42□□□□□ -1.06
TRAPPC4-211ENST00000533012 FFAR4Q5NUL3 377 aa8.42□□□□□ -1.06
TRAPPC4-211ENST00000533012 LEMD1Q68G75 181 aa8.42□□□□□ -1.06
TRAPPC4-211ENST00000533012 HSD17B11Q8NBQ5 300 aa8.42□□□□□ -1.06
TRAPPC4-211ENST00000533012 STXBP6Q8NFX7 210 aa8.42□□□□□ -1.06
TRAPPC4-211ENST00000533012 OR2G3Q8NGZ4 309 aa8.42□□□□□ -1.06
TRAPPC4-211ENST00000533012 HRH4Q9H3N8 390 aa8.42□□□□□ -1.06
TRAPPC4-211ENST00000533012 TREM1Q9NP99 234 aa8.42□□□□□ -1.06
TRAPPC4-211ENST00000533012 MBP02144 154 aa8.41□□□□□ -1.06
TRAPPC4-211ENST00000533012 CD7P09564 240 aa8.41□□□□□ -1.06
TRAPPC4-211ENST00000533012 ATP6V0CP27449 155 aa8.41□□□□□ -1.06
TRAPPC4-211ENST00000533012 ACOT6Q3I5F7 207 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC4-211ENST00000533012 GCSAMLQ5JQS6 135 aa8.41□□□□□ -1.06
TRAPPC4-211ENST00000533012 FAM78BQ5VT40 261 aa8.41□□□□□ -1.06
TRAPPC4-211ENST00000533012 Q8N1Y9 231 aa8.41□□□□□ -1.06
TRAPPC4-211ENST00000533012 LYPD6BQ8NI32 183 aa8.41□□□□□ -1.06
TRAPPC4-211ENST00000533012 SUN5Q8TC36 379 aa8.41□□□□□ -1.06
TRAPPC4-211ENST00000533012 SEC11CQ9BY50 192 aa8.41□□□□□ -1.06
TRAPPC4-211ENST00000533012 NRN1Q9NPD7 142 aa8.41□□□□□ -1.06
TRAPPC4-211ENST00000533012 SMAD5-AS1Q9Y6J3 95 aa8.41□□□□□ -1.06
TRAPPC4-211ENST00000533012 NBEAL1Q6ZS30 2694 aa8.4□□□□□ -1.06
TRAPPC4-211ENST00000533012 TMEM218A2RU14 115 aa8.4□□□□□ -1.06
TRAPPC4-211ENST00000533012 OR11H12B2RN74 326 aa8.4□□□□□ -1.06
TRAPPC4-211ENST00000533012 K7EIL1 84 aa8.4□□□□□ -1.06
TRAPPC4-211ENST00000533012 SNAPINO95295 136 aa8.4□□□□□ -1.06
TRAPPC4-211ENST00000533012 BPIFA4PQ86YQ2 179 aa8.4□□□□□ -1.06
TRAPPC4-211ENST00000533012 MRAPQ8TCY5 172 aa8.4□□□□□ -1.06
TRAPPC4-211ENST00000533012 DCANP1Q8TF63 244 aa8.4□□□□□ -1.06
TRAPPC4-211ENST00000533012 LINC00052Q96N35 136 aa8.4□□□□□ -1.06
TRAPPC4-211ENST00000533012 RFNGQ9Y644 331 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms