RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 NHP2Q9NX24 153 aaKnown RBP7.17□□□□□ -1.26
CTNND1-232ENST00000532649 TNFRSF6BO95407 300 aa7.17□□□□□ -1.26
CTNND1-232ENST00000532649 LCNL1Q6ZST4 164 aa7.17□□□□□ -1.26
CTNND1-232ENST00000532649 MIR17HGQ75NE6 70 aa7.17□□□□□ -1.26
CTNND1-232ENST00000532649 RCC1LQ96I51 464 aaKnown RBP7.17□□□□□ -1.26
CTNND1-232ENST00000532649 BPESC1Q9GZL8 116 aa7.17□□□□□ -1.26
CTNND1-232ENST00000532649 MLNRO43193 412 aa7.17□□□□□ -1.26
CTNND1-232ENST00000532649 CD5LO43866 347 aa7.17□□□□□ -1.26
CTNND1-232ENST00000532649 DAD1P61803 113 aa7.17□□□□□ -1.26
CTNND1-232ENST00000532649 SSBP2P81877 361 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-232ENST00000532649 PROK2Q9HC23 129 aa7.17□□□□□ -1.26
CTNND1-232ENST00000532649 GATA4P43694 442 aa7.16□□□□□ -1.26
CTNND1-232ENST00000532649 GNG5P63218 68 aa7.16□□□□□ -1.26
CTNND1-232ENST00000532649 GAFA1Q96PS6 74 aa7.16□□□□□ -1.26
CTNND1-232ENST00000532649 ZNF407Q9C0G0 2248 aa7.16□□□□□ -1.26
CTNND1-232ENST00000532649 TRAV9-1A0A075B6T8 112 aa7.16□□□□□ -1.26
CTNND1-232ENST00000532649 LAGE3Q14657 143 aa7.16□□□□□ -1.26
CTNND1-232ENST00000532649 MRPL52Q86TS9 123 aaKnown RBP7.16□□□□□ -1.26
CTNND1-232ENST00000532649 TP53BP1Q12888 1972 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-232ENST00000532649 NHLRC3Q5JS37 347 aa7.16□□□□□ -1.26
CTNND1-232ENST00000532649 PUSL1Q8N0Z8 303 aaKnown RBP7.16□□□□□ -1.26
CTNND1-232ENST00000532649 LINC01356Q8N9X3 169 aa7.16□□□□□ -1.26
CTNND1-232ENST00000532649 PPBPP02775 128 aa7.16□□□□□ -1.26
CTNND1-232ENST00000532649 ANXA2RQ3ZCQ2 193 aa7.16□□□□□ -1.26
CTNND1-232ENST00000532649 ZNF876PQ49A33 203 aa7.16□□□□□ -1.26
CTNND1-232ENST00000532649 FOXL2NBQ6ZUU3 175 aa7.16□□□□□ -1.26
CTNND1-232ENST00000532649 ATP5L2Q7Z4Y8 100 aa7.16□□□□□ -1.26
CTNND1-232ENST00000532649 PKIGQ9Y2B9 76 aa7.16□□□□□ -1.26
CTNND1-232ENST00000532649 F5H768 121 aa7.15□□□□□ -1.26
CTNND1-232ENST00000532649 CD300EQ496F6 205 aaPredicted RBP7.15□□□□□ -1.26
CTNND1-232ENST00000532649 TPTE2P1Q5T6R2 138 aa7.15□□□□□ -1.26
CTNND1-232ENST00000532649 UBE2E2Q96LR5 201 aa7.15□□□□□ -1.26
CTNND1-232ENST00000532649 MCRIP2Q9BUT9 160 aaKnown RBP7.15□□□□□ -1.26
CTNND1-232ENST00000532649 HIGD1CA8MV81 97 aa7.15□□□□□ -1.26
CTNND1-232ENST00000532649 SLC25A16P16260 332 aa7.15□□□□□ -1.26
CTNND1-232ENST00000532649 HGFACQ04756 655 aa7.15□□□□□ -1.26
CTNND1-232ENST00000532649 LYPD2Q6UXB3 125 aa7.15□□□□□ -1.26
CTNND1-232ENST00000532649 TMEM144Q7Z5S9 345 aa7.15□□□□□ -1.26
CTNND1-232ENST00000532649 SELENOKQ9Y6D0 94 aa7.15□□□□□ -1.26
CTNND1-232ENST00000532649 IGHV1-3A0A0C4DH29 117 aa7.15□□□□□ -1.27
CTNND1-232ENST00000532649 H3BUX3 64 aa7.15□□□□□ -1.27
CTNND1-232ENST00000532649 DEFB130BP0DP73 79 aa7.15□□□□□ -1.27
CTNND1-232ENST00000532649 DEFB130AP0DP74 79 aa7.15□□□□□ -1.27
CTNND1-232ENST00000532649 PPIFP30405 207 aaKnown RBP7.15□□□□□ -1.27
CTNND1-232ENST00000532649 LCN12Q6JVE5 192 aa7.15□□□□□ -1.27
CTNND1-232ENST00000532649 PSG8Q9UQ74 426 aa7.15□□□□□ -1.27
CTNND1-232ENST00000532649 APOC4P55056 127 aa7.15□□□□□ -1.27
CTNND1-232ENST00000532649 MINOS1Q5TGZ0 78 aa7.15□□□□□ -1.27
CTNND1-232ENST00000532649 ZNF625Q96I27 306 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-232ENST00000532649 MINOS1-NBL1R4GNA1 71 aa7.15□□□□□ -1.27
CTNND1-232ENST00000532649 KIF26AQ9ULI4 1882 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-232ENST00000532649 IGKV1D-17A0A075B6S4 117 aa7.14□□□□□ -1.27
CTNND1-232ENST00000532649 J3QKU1 62 aa7.14□□□□□ -1.27
CTNND1-232ENST00000532649 BTCP35070 178 aa7.14□□□□□ -1.27
CTNND1-232ENST00000532649 SPSB3Q6PJ21 355 aa7.14□□□□□ -1.27
CTNND1-232ENST00000532649 RNF144BQ7Z419 303 aa7.14□□□□□ -1.27
CTNND1-232ENST00000532649 PIP4P2Q8N4L2 257 aa7.14□□□□□ -1.27
CTNND1-232ENST00000532649 M0R1W7 72 aa7.14□□□□□ -1.27
CTNND1-232ENST00000532649 INAFM2P0DMQ5 153 aa7.14□□□□□ -1.27
CTNND1-232ENST00000532649 A6NNC1 897 aa7.14□□□□□ -1.27
CTNND1-232ENST00000532649 MYMXA0A1B0GTQ4 84 aa7.14□□□□□ -1.27
CTNND1-232ENST00000532649 RNF223E7ERA6 249 aa7.14□□□□□ -1.27
CTNND1-232ENST00000532649 CD55P08174 381 aa7.14□□□□□ -1.27
CTNND1-232ENST00000532649 C10orf55Q5SWW7 151 aa7.14□□□□□ -1.27
CTNND1-232ENST00000532649 IMMP2LQ96T52 175 aa7.14□□□□□ -1.27
CTNND1-232ENST00000532649 TRBV7-1A0A0A6YYK4 115 aa7.14□□□□□ -1.27
CTNND1-232ENST00000532649 TNFSF13O75888 250 aa7.14□□□□□ -1.27
CTNND1-232ENST00000532649 LSM4Q9Y4Z0 139 aaKnown RBP7.14□□□□□ -1.27
CTNND1-232ENST00000532649 PRTN3P24158 256 aa7.13□□□□□ -1.27
CTNND1-232ENST00000532649 C1orf159Q96HA4 380 aa7.13□□□□□ -1.27
CTNND1-232ENST00000532649 EPDR1Q9UM22 224 aa7.13□□□□□ -1.27
CTNND1-232ENST00000532649 ETV2O00321 342 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-232ENST00000532649 ESDP10768 282 aa7.13□□□□□ -1.27
CTNND1-232ENST00000532649 OCIAD2Q56VL3 154 aa7.13□□□□□ -1.27
CTNND1-232ENST00000532649 Q6P435 159 aa7.13□□□□□ -1.27
CTNND1-232ENST00000532649 WISP1O95388 367 aa7.13□□□□□ -1.27
CTNND1-232ENST00000532649 FHL1Q13642 323 aa7.13□□□□□ -1.27
CTNND1-232ENST00000532649 GAGE2AQ6NT46 116 aa7.13□□□□□ -1.27
CTNND1-232ENST00000532649 SLC25A48Q6ZT89 311 aaKnown RBP7.13□□□□□ -1.27
CTNND1-232ENST00000532649 FAM110DQ8TAY7 271 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-232ENST00000532649 PKDREJQ9NTG1 2253 aa7.13□□□□□ -1.27
CTNND1-232ENST00000532649 OOSP1A8MZH6 123 aa7.13□□□□□ -1.27
CTNND1-232ENST00000532649 ATP5G3P48201 142 aa7.13□□□□□ -1.27
CTNND1-232ENST00000532649 GAGE13Q4V321 117 aa7.13□□□□□ -1.27
CTNND1-232ENST00000532649 SMPXQ9UHP9 88 aa7.13□□□□□ -1.27
CTNND1-232ENST00000532649 TEX48A0A1B0GUV7 120 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 FAM223BA6NKX1 122 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 FAM90A9PA6NNJ1 464 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 C5orf24Q7Z6I8 188 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 FAM223AQ8IWN6 122 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 MAPK1IP1LQ8NDC0 245 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 RSPO3Q9BXY4 272 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-232ENST00000532649 TRAV5A0A0B4J249 113 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 RNF222A6NCQ9 220 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 BUB1B-PAK6H3BSN5 160 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 CHKB-CPT1BH3BT56 60 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 C2orf82Q6UX34 121 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 TMEM256Q8N2U0 113 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 SMIM2Q9BVW6 85 aa7.12□□□□□ -1.27
CTNND1-232ENST00000532649 ABCA4P78363 2273 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms