RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 SNRPEP62304 92 aaKnown RBP12.53□□□□□ -0.4
PPFIA1-222ENST00000532504 TCTEX1D4Q5JR98 221 aa12.53□□□□□ -0.4
PPFIA1-222ENST00000532504 TRAV21A0A0B4J279 112 aa12.53□□□□□ -0.4
PPFIA1-222ENST00000532504 TMEM183BQ1AE95 376 aa12.53□□□□□ -0.4
PPFIA1-222ENST00000532504 TMEM183AQ8IXX5 376 aa12.53□□□□□ -0.4
PPFIA1-222ENST00000532504 PUSL1Q8N0Z8 303 aaKnown RBP12.53□□□□□ -0.4
PPFIA1-222ENST00000532504 OR10D4PQ8NGN7 298 aa12.53□□□□□ -0.4
PPFIA1-222ENST00000532504 NIT2Q9NQR4 276 aa12.53□□□□□ -0.4
PPFIA1-222ENST00000532504 ELANEP08246 267 aa12.52□□□□□ -0.4
PPFIA1-222ENST00000532504 TCTAP57738 103 aa12.52□□□□□ -0.4
PPFIA1-222ENST00000532504 Q8N7P7 452 aa12.52□□□□□ -0.4
PPFIA1-222ENST00000532504 DOCK11Q5JSL3 2073 aa12.52□□□□□ -0.4
PPFIA1-222ENST00000532504 NUDT3O95989 172 aa12.52□□□□□ -0.41
PPFIA1-222ENST00000532504 SMAGPQ0VAQ4 97 aa12.52□□□□□ -0.41
PPFIA1-222ENST00000532504 DPH3Q96FX2 82 aa12.52□□□□□ -0.41
PPFIA1-222ENST00000532504 KCNS1Q96KK3 526 aa12.52□□□□□ -0.41
PPFIA1-222ENST00000532504 A0A1W2PRE2 83 aa12.52□□□□□ -0.41
PPFIA1-222ENST00000532504 C19orf54Q5BKX5 351 aa12.52□□□□□ -0.41
PPFIA1-222ENST00000532504 Q8TAT8 98 aa12.52□□□□□ -0.41
PPFIA1-222ENST00000532504 ASCL2Q99929 193 aa12.52□□□□□ -0.41
PPFIA1-222ENST00000532504 GPR61Q9BZJ8 451 aa12.52□□□□□ -0.41
PPFIA1-222ENST00000532504 ANAPC10Q9UM13 185 aa12.52□□□□□ -0.41
PPFIA1-222ENST00000532504 TRAV12-3A0A0B4J271 114 aa12.52□□□□□ -0.41
PPFIA1-222ENST00000532504 TRGV4A0A0C4DH28 118 aa12.52□□□□□ -0.41
PPFIA1-222ENST00000532504 CCL20P78556 96 aa12.52□□□□□ -0.41
PPFIA1-222ENST00000532504 C9orf139Q6ZV77 190 aa12.52□□□□□ -0.41
PPFIA1-222ENST00000532504 FER1L6-AS1Q8NA97 138 aa12.52□□□□□ -0.41
PPFIA1-222ENST00000532504 PGPEP1LA6NFU8 196 aa12.51□□□□□ -0.41
PPFIA1-222ENST00000532504 LMO4P61968 165 aa12.51□□□□□ -0.41
PPFIA1-222ENST00000532504 LOXL1Q08397 574 aaPredicted RBP12.51□□□□□ -0.41
PPFIA1-222ENST00000532504 RNASE7Q9H1E1 156 aaKnown RBP12.51□□□□□ -0.41
PPFIA1-222ENST00000532504 PTTG1IPP53801 180 aa12.51□□□□□ -0.41
PPFIA1-222ENST00000532504 C8orf86Q6ZUL3 223 aa12.51□□□□□ -0.41
PPFIA1-222ENST00000532504 MAP1LC3AQ9H492 121 aa12.51□□□□□ -0.41
PPFIA1-222ENST00000532504 AGMATQ9BSE5 352 aa12.51□□□□□ -0.41
PPFIA1-222ENST00000532504 INAFM1C9JVW0 142 aa12.5□□□□□ -0.41
PPFIA1-222ENST00000532504 PHOX2AO14813 284 aa12.5□□□□□ -0.41
PPFIA1-222ENST00000532504 IFITM2Q01629 132 aa12.5□□□□□ -0.41
PPFIA1-222ENST00000532504 RPP25LQ8N5L8 163 aaKnown RBP12.5□□□□□ -0.41
PPFIA1-222ENST00000532504 HTTP42858 3142 aa12.5□□□□□ -0.41
PPFIA1-222ENST00000532504 FOXA3P55318 350 aaPredicted RBP12.5□□□□□ -0.41
PPFIA1-222ENST00000532504 BBC3Q96PG8 261 aaPredicted RBP12.5□□□□□ -0.41
PPFIA1-222ENST00000532504 KIR2DL4Q99706 377 aa12.5□□□□□ -0.41
PPFIA1-222ENST00000532504 RPP21Q9H633 154 aaKnown RBP12.5□□□□□ -0.41
PPFIA1-222ENST00000532504 SRP19P09132 144 aaKnown RBP12.5□□□□□ -0.41
PPFIA1-222ENST00000532504 RITA1Q96K30 269 aa12.5□□□□□ -0.41
PPFIA1-222ENST00000532504 TGIF2-C20orf24A0A0A6YYL0 155 aa12.5□□□□□ -0.41
PPFIA1-222ENST00000532504 M0R3E3 92 aa12.5□□□□□ -0.41
PPFIA1-222ENST00000532504 FOXL1Q12952 345 aa12.5□□□□□ -0.41
PPFIA1-222ENST00000532504 LCN12Q6JVE5 192 aa12.5□□□□□ -0.41
PPFIA1-222ENST00000532504 LRRC75A-AS1Q8N1F1 130 aa12.5□□□□□ -0.41
PPFIA1-222ENST00000532504 TSSC4Q9Y5U2 329 aaPredicted RBP12.5□□□□□ -0.41
PPFIA1-222ENST00000532504 TLN2Q9Y4G6 2542 aa12.49□□□□□ -0.41
PPFIA1-222ENST00000532504 HLA-DQA1P01909 254 aa12.49□□□□□ -0.41
PPFIA1-222ENST00000532504 TAS2R60P59551 318 aa12.49□□□□□ -0.41
PPFIA1-222ENST00000532504 Q6ZSR3 168 aa12.49□□□□□ -0.41
PPFIA1-222ENST00000532504 STAG3L2P0CL84 134 aa12.49□□□□□ -0.41
PPFIA1-222ENST00000532504 STAG3L3P0CL85 134 aa12.49□□□□□ -0.41
PPFIA1-222ENST00000532504 Q1RN00 199 aa12.49□□□□□ -0.41
PPFIA1-222ENST00000532504 MAP1LC3CQ9BXW4 147 aa12.49□□□□□ -0.41
PPFIA1-222ENST00000532504 MRPL18Q9H0U6 180 aaKnown RBP12.49□□□□□ -0.41
PPFIA1-222ENST00000532504 NRN1Q9NPD7 142 aa12.49□□□□□ -0.41
PPFIA1-222ENST00000532504 H7C1H1 209 aa12.49□□□□□ -0.41
PPFIA1-222ENST00000532504 REC114Q7Z4M0 266 aa12.49□□□□□ -0.41
PPFIA1-222ENST00000532504 C8orf31Q8N9H6 132 aa12.48□□□□□ -0.41
PPFIA1-222ENST00000532504 XCL2Q9UBD3 114 aa12.48□□□□□ -0.41
PPFIA1-222ENST00000532504 RNF182Q8N6D2 247 aa12.48□□□□□ -0.41
PPFIA1-222ENST00000532504 LRP4O75096 1905 aa12.48□□□□□ -0.41
PPFIA1-222ENST00000532504 MT-ND6P03923 174 aa12.48□□□□□ -0.41
PPFIA1-222ENST00000532504 HBBP68871 147 aa12.48□□□□□ -0.41
PPFIA1-222ENST00000532504 MRAPQ8TCY5 172 aa12.48□□□□□ -0.41
PPFIA1-222ENST00000532504 ZNF256Q9Y2P7 627 aaPredicted RBP12.48□□□□□ -0.41
PPFIA1-222ENST00000532504 IGHV3-53P01767 116 aa12.48□□□□□ -0.41
PPFIA1-222ENST00000532504 LRRK2Q5S007 2527 aa12.47□□□□□ -0.41
PPFIA1-222ENST00000532504 A0A1B0GUT8 65 aa12.47□□□□□ -0.41
PPFIA1-222ENST00000532504 CCL24O00175 119 aa12.47□□□□□ -0.41
PPFIA1-222ENST00000532504 TRAV8-1A0A0A6YYK1 113 aa12.47□□□□□ -0.41
PPFIA1-222ENST00000532504 SRIP30626 198 aa12.47□□□□□ -0.41
PPFIA1-222ENST00000532504 VAMP8Q9BV40 100 aa12.47□□□□□ -0.41
PPFIA1-222ENST00000532504 FBLL1A6NHQ2 334 aaKnown RBP12.47□□□□□ -0.41
PPFIA1-222ENST00000532504 IGHV4-31P0DP07 118 aa12.47□□□□□ -0.41
PPFIA1-222ENST00000532504 ELOBQ15370 118 aa12.47□□□□□ -0.41
PPFIA1-222ENST00000532504 TRGV1A0A0A0MS02 117 aa12.47□□□□□ -0.41
PPFIA1-222ENST00000532504 TRGC2P03986 189 aa12.47□□□□□ -0.41
PPFIA1-222ENST00000532504 HERVK_113P61574 105 aa12.47□□□□□ -0.41
PPFIA1-222ENST00000532504 SIRPDQ9H106 197 aa12.47□□□□□ -0.41
PPFIA1-222ENST00000532504 H3BVH4 76 aa12.46□□□□□ -0.41
PPFIA1-222ENST00000532504 ZNF502Q8TBZ5 544 aa12.46□□□□□ -0.41
PPFIA1-222ENST00000532504 PACRGQ96M98 296 aaPredicted RBP12.46□□□□□ -0.41
PPFIA1-222ENST00000532504 SHANK2-AS3Q9BTD1 123 aa12.46□□□□□ -0.41
PPFIA1-222ENST00000532504 ZFP30Q9Y2G7 519 aa12.46□□□□□ -0.41
PPFIA1-222ENST00000532504 TRGV11A0A075B6L2 103 aa12.46□□□□□ -0.41
PPFIA1-222ENST00000532504 IGHV3-73A0A0B4J1V6 119 aa12.46□□□□□ -0.41
PPFIA1-222ENST00000532504 CBLN1P23435 193 aa12.46□□□□□ -0.41
PPFIA1-222ENST00000532504 SCGB1D4Q6XE38 83 aa12.46□□□□□ -0.41
PPFIA1-222ENST00000532504 HSPB9Q9BQS6 159 aa12.46□□□□□ -0.41
PPFIA1-222ENST00000532504 ZNF138P52744 262 aa12.46□□□□□ -0.42
PPFIA1-222ENST00000532504 IGHV7-81A0A0B4J1V7 117 aa12.45□□□□□ -0.42
PPFIA1-222ENST00000532504 MYO9AB2RTY4 2548 aa12.45□□□□□ -0.42
PPFIA1-222ENST00000532504 MKI67P46013 3256 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms