RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 Q8TAT8 98 aa6.65□□□□□ -1.34
CTNND1-231ENST00000532463 TAF1P21675 1872 aa6.65□□□□□ -1.34
CTNND1-231ENST00000532463 NDUFC2-KCTD14E9PQ53 114 aa6.65□□□□□ -1.35
CTNND1-231ENST00000532463 TMEM92Q6UXU6 159 aa6.65□□□□□ -1.35
CTNND1-231ENST00000532463 C18orf32Q8TCD1 76 aa6.65□□□□□ -1.35
CTNND1-231ENST00000532463 C20orf173Q96LM9 149 aa6.65□□□□□ -1.35
CTNND1-231ENST00000532463 DDX60LQ5H9U9 1706 aaKnown RBP6.65□□□□□ -1.35
CTNND1-231ENST00000532463 LAIR2Q6ISS4 152 aa6.65□□□□□ -1.35
CTNND1-231ENST00000532463 CASC2Q6XLA1 102 aa6.65□□□□□ -1.35
CTNND1-231ENST00000532463 METRNQ9UJH8 293 aa6.65□□□□□ -1.35
CTNND1-231ENST00000532463 PLCH1Q4KWH8 1693 aa6.65□□□□□ -1.35
CTNND1-231ENST00000532463 RGPD5Q99666 1765 aa6.65□□□□□ -1.35
CTNND1-231ENST00000532463 ETDCA0A1B0GVM5 59 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 K7ERJ3 54 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 M0R1W7 72 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 LINC01565O15544 149 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 C15orf32Q32M92 178 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 Q71RC1 249 aaPredicted RBP6.64□□□□□ -1.35
CTNND1-231ENST00000532463 MPLKIPQ8TAP9 179 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 CFHR4Q92496 578 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 AKAP11Q9UKA4 1901 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 IGHV1OR15-1A0A075B7D0 117 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 IGHV2OR16-5A0A0B4J2B6 119 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 CCL25O15444 150 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 PSG7Q13046 419 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 LINC01545Q5VT33 79 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 MESP1Q9BRJ9 268 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 SRXN1Q9BYN0 137 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 RGPD1P0DJD0 1748 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 TRBV7-1A0A0A6YYK4 115 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 IGKV1D-13A0A0B4J2D9 117 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 F8VRH5 84 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 IGKV1-13P0DP09 117 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 FOXE3Q13461 319 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 ZNF329Q86UD4 541 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 RETNQ9HD89 108 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 NTN3O00634 580 aaPredicted RBP6.64□□□□□ -1.35
CTNND1-231ENST00000532463 ITGBL1O95965 494 aaPredicted RBP6.64□□□□□ -1.35
CTNND1-231ENST00000532463 CCL3L1P16619 93 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 CFHR2P36980 270 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 DEFB121Q5J5C9 76 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 Q86TA4 180 aa6.64□□□□□ -1.35
CTNND1-231ENST00000532463 SPTBP11277 2137 aa6.63□□□□□ -1.35
CTNND1-231ENST00000532463 IGLL1P15814 213 aa6.63□□□□□ -1.35
CTNND1-231ENST00000532463 FAM201AQ5SY85 155 aa6.63□□□□□ -1.35
CTNND1-231ENST00000532463 RNF166Q96A37 237 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-231ENST00000532463 ZNF501Q96CX3 271 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-231ENST00000532463 TRAV26-1A0A087WT03 109 aa6.63□□□□□ -1.35
CTNND1-231ENST00000532463 PRSS46E5RG02 174 aa6.63□□□□□ -1.35
CTNND1-231ENST00000532463 TIMM23O14925 209 aa6.63□□□□□ -1.35
CTNND1-231ENST00000532463 C8orf86Q6ZUL3 223 aa6.63□□□□□ -1.35
CTNND1-231ENST00000532463 LINC01560Q8TB33 94 aa6.63□□□□□ -1.35
CTNND1-231ENST00000532463 ZNF492Q9P255 531 aa6.63□□□□□ -1.35
CTNND1-231ENST00000532463 DOPEY2Q9Y3R5 2298 aa6.63□□□□□ -1.35
CTNND1-231ENST00000532463 TRBV19A0A075B6N1 114 aa6.63□□□□□ -1.35
CTNND1-231ENST00000532463 TEX22C9J3V5 150 aa6.63□□□□□ -1.35
CTNND1-231ENST00000532463 IGHV2-70P01814 119 aa6.63□□□□□ -1.35
CTNND1-231ENST00000532463 CECR9P0C854 216 aa6.63□□□□□ -1.35
CTNND1-231ENST00000532463 RPP25LQ8N5L8 163 aaKnown RBP6.63□□□□□ -1.35
CTNND1-231ENST00000532463 C17orf100A8MU93 164 aa6.63□□□□□ -1.35
CTNND1-231ENST00000532463 SMRP1Q8NCR6 262 aa6.63□□□□□ -1.35
CTNND1-231ENST00000532463 SPAARA0A1B0GVQ0 90 aa6.63□□□□□ -1.35
CTNND1-231ENST00000532463 TRBV12-3P01733 135 aa6.63□□□□□ -1.35
CTNND1-231ENST00000532463 CRYBG1Q9Y4K1 1723 aa6.63□□□□□ -1.35
CTNND1-231ENST00000532463 SDHAF1A6NFY7 115 aa6.62□□□□□ -1.35
CTNND1-231ENST00000532463 JMJD7-PLA2G4BH0Y9G9 81 aa6.62□□□□□ -1.35
CTNND1-231ENST00000532463 CRYGBP07316 175 aa6.62□□□□□ -1.35
CTNND1-231ENST00000532463 C1orf195Q5TG92 126 aa6.62□□□□□ -1.35
CTNND1-231ENST00000532463 ZNF497Q6ZNH5 498 aa6.62□□□□□ -1.35
CTNND1-231ENST00000532463 SCN3AQ9NY46 2000 aa6.62□□□□□ -1.35
CTNND1-231ENST00000532463 F5H768 121 aa6.62□□□□□ -1.35
CTNND1-231ENST00000532463 BUB3O43684 328 aa6.62□□□□□ -1.35
CTNND1-231ENST00000532463 C3orf22Q8N5N4 141 aa6.62□□□□□ -1.35
CTNND1-231ENST00000532463 RNF5Q99942 180 aa6.62□□□□□ -1.35
CTNND1-231ENST00000532463 MRPL35Q9NZE8 188 aaKnown RBP6.62□□□□□ -1.35
CTNND1-231ENST00000532463 DDX60Q8IY21 1712 aaKnown RBP6.62□□□□□ -1.35
CTNND1-231ENST00000532463 DEFB125Q8N687 156 aa6.62□□□□□ -1.35
CTNND1-231ENST00000532463 MSRB2Q9Y3D2 182 aa6.62□□□□□ -1.35
CTNND1-231ENST00000532463 HEATR5BQ9P2D3 2071 aa6.62□□□□□ -1.35
CTNND1-231ENST00000532463 HEATR1Q9H583 2144 aaKnown RBP6.62□□□□□ -1.35
CTNND1-231ENST00000532463 FAM236DA0A1B0GTK5 79 aa6.62□□□□□ -1.35
CTNND1-231ENST00000532463 IGKV1-5P01602 117 aa6.62□□□□□ -1.35
CTNND1-231ENST00000532463 FAM236CP0DP71 79 aa6.62□□□□□ -1.35
CTNND1-231ENST00000532463 CR1LQ2VPA4 569 aa6.62□□□□□ -1.35
CTNND1-231ENST00000532463 TEN1Q86WV5 123 aa6.62□□□□□ -1.35
CTNND1-231ENST00000532463 RPP25Q9BUL9 199 aaKnown RBP6.62□□□□□ -1.35
CTNND1-231ENST00000532463 CACNA1DQ01668 2161 aa6.62□□□□□ -1.35
CTNND1-231ENST00000532463 DOCK9Q9BZ29 2069 aa6.62□□□□□ -1.35
CTNND1-231ENST00000532463 LOC101059948A0A1B0GTJ6 334 aa6.61□□□□□ -1.35
CTNND1-231ENST00000532463 PRSS47A8MTI9 375 aa6.61□□□□□ -1.35
CTNND1-231ENST00000532463 CELA2AP08217 269 aa6.61□□□□□ -1.35
CTNND1-231ENST00000532463 VWC2Q2TAL6 325 aa6.61□□□□□ -1.35
CTNND1-231ENST00000532463 ZCCHC24Q8N2G6 241 aaKnown RBP6.61□□□□□ -1.35
CTNND1-231ENST00000532463 SLX4Q8IY92 1834 aa6.61□□□□□ -1.35
CTNND1-231ENST00000532463 PHIPQ8WWQ0 1821 aa6.61□□□□□ -1.35
CTNND1-231ENST00000532463 USMG5Q96IX5 58 aa6.61□□□□□ -1.35
CTNND1-231ENST00000532463 OPRPNQ99935 248 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-231ENST00000532463 SIGLEC8Q9NYZ4 499 aa6.61□□□□□ -1.35
CTNND1-231ENST00000532463 TRIP11Q15643 1979 aa6.61□□□□□ -1.35
CTNND1-231ENST00000532463 PTPRZ1P23471 2315 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms