RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 GP9P14770 177 aa16.8■□□□□ 0.28
PACSIN3-209ENST00000532457 PEA15Q15121 130 aa16.8■□□□□ 0.28
PACSIN3-209ENST00000532457 FAM209BQ5JX69 171 aa16.8■□□□□ 0.28
PACSIN3-209ENST00000532457 C20orf24Q9BUV8 137 aa16.8■□□□□ 0.28
PACSIN3-209ENST00000532457 IGHV4OR15-8A0A075B7B6 117 aa16.79■□□□□ 0.28
PACSIN3-209ENST00000532457 A0A087WW49 117 aa16.79■□□□□ 0.28
PACSIN3-209ENST00000532457 IGHV3-49A0A0A0MS15 119 aa16.79■□□□□ 0.28
PACSIN3-209ENST00000532457 TMEM218A2RU14 115 aa16.79■□□□□ 0.28
PACSIN3-209ENST00000532457 MRPS12O15235 138 aaKnown RBP16.79■□□□□ 0.28
PACSIN3-209ENST00000532457 CD81P60033 236 aa16.79■□□□□ 0.28
PACSIN3-209ENST00000532457 DEFB136Q30KP8 78 aa16.79■□□□□ 0.28
PACSIN3-209ENST00000532457 VAX2Q9UIW0 290 aa16.79■□□□□ 0.28
PACSIN3-209ENST00000532457 IGHV3OR16-13A0A075B7E8 117 aa16.78■□□□□ 0.28
PACSIN3-209ENST00000532457 IGHV3-74A0A0B4J1X5 117 aa16.78■□□□□ 0.28
PACSIN3-209ENST00000532457 H3BQ15 152 aa16.78■□□□□ 0.28
PACSIN3-209ENST00000532457 NARS2Q96I59 477 aaKnown RBP16.78■□□□□ 0.28
PACSIN3-209ENST00000532457 U3KQE9 123 aa16.78■□□□□ 0.28
PACSIN3-209ENST00000532457 IGHV3-66A0A0C4DH42 116 aa16.77■□□□□ 0.28
PACSIN3-209ENST00000532457 FAM74A7A6NL05 159 aa16.77■□□□□ 0.28
PACSIN3-209ENST00000532457 H3BTX0 84 aa16.77■□□□□ 0.28
PACSIN3-209ENST00000532457 SRP19P09132 144 aaKnown RBP16.77■□□□□ 0.28
PACSIN3-209ENST00000532457 CRYBB3P26998 211 aa16.77■□□□□ 0.28
PACSIN3-209ENST00000532457 ATP5G3P48201 142 aa16.77■□□□□ 0.28
PACSIN3-209ENST00000532457 ZNF747Q9BV97 191 aa16.77■□□□□ 0.28
PACSIN3-209ENST00000532457 MANBALQ9NQG1 85 aa16.77■□□□□ 0.28
PACSIN3-209ENST00000532457 ZNF320A2RRD8 509 aa16.77■□□□□ 0.27
PACSIN3-209ENST00000532457 ADCYAP1P18509 176 aa16.77■□□□□ 0.27
PACSIN3-209ENST00000532457 KRTAP10-3P60369 221 aa16.77■□□□□ 0.27
PACSIN3-209ENST00000532457 UBE2L3P68036 154 aaKnown RBP16.77■□□□□ 0.27
PACSIN3-209ENST00000532457 GPHB5Q86YW7 130 aa16.77■□□□□ 0.27
PACSIN3-209ENST00000532457 C17orf77Q96MU5 243 aa16.77■□□□□ 0.27
PACSIN3-209ENST00000532457 TMEM167BQ9NRX6 74 aa16.77■□□□□ 0.27
PACSIN3-209ENST00000532457 TMEM14CQ9P0S9 112 aa16.77■□□□□ 0.27
PACSIN3-209ENST00000532457 BUB3O43684 328 aa16.76■□□□□ 0.27
PACSIN3-209ENST00000532457 IFNA1P01562 189 aa16.76■□□□□ 0.27
PACSIN3-209ENST00000532457 EDN2P20800 178 aa16.76■□□□□ 0.27
PACSIN3-209ENST00000532457 PPT1P50897 306 aa16.76■□□□□ 0.27
PACSIN3-209ENST00000532457 TM4SF20Q53R12 229 aa16.76■□□□□ 0.27
PACSIN3-209ENST00000532457 TMEM190Q8WZ59 177 aa16.76■□□□□ 0.27
PACSIN3-209ENST00000532457 DUX3Q96PT4 197 aa16.76■□□□□ 0.27
PACSIN3-209ENST00000532457 CITED2Q99967 270 aaPredicted RBP16.76■□□□□ 0.27
PACSIN3-209ENST00000532457 ZNF586Q9NXT0 402 aa16.76■□□□□ 0.27
PACSIN3-209ENST00000532457 SMAD5-AS1Q9Y6J3 95 aa16.76■□□□□ 0.27
PACSIN3-209ENST00000532457 SFTA3P0C7M3 94 aa16.75■□□□□ 0.27
PACSIN3-209ENST00000532457 NPPCP23582 126 aa16.75■□□□□ 0.27
PACSIN3-209ENST00000532457 MEF2BQ02080 365 aaPredicted RBP16.75■□□□□ 0.27
PACSIN3-209ENST00000532457 KHDC1LQ5JSQ8 128 aa16.75■□□□□ 0.27
PACSIN3-209ENST00000532457 CST9LP1Q5W188 147 aa16.75■□□□□ 0.27
PACSIN3-209ENST00000532457 C4orf3Q8WVX3 66 aa16.75■□□□□ 0.27
PACSIN3-209ENST00000532457 STAB1Q9NY15 2570 aa16.75■□□□□ 0.27
PACSIN3-209ENST00000532457 NBEAP1P0C6P0 100 aa16.75■□□□□ 0.27
PACSIN3-209ENST00000532457 STXBP6Q8NFX7 210 aa16.75■□□□□ 0.27
PACSIN3-209ENST00000532457 BLNKQ8WV28 456 aa16.75■□□□□ 0.27
PACSIN3-209ENST00000532457 METTL26Q96S19 204 aa16.75■□□□□ 0.27
PACSIN3-209ENST00000532457 CITED1Q99966 193 aa16.75■□□□□ 0.27
PACSIN3-209ENST00000532457 C11orf94C9JXX5 98 aa16.74■□□□□ 0.27
PACSIN3-209ENST00000532457 IGLC2P0DOY2 106 aa16.74■□□□□ 0.27
PACSIN3-209ENST00000532457 RPEL1Q2QD12 228 aa16.74■□□□□ 0.27
PACSIN3-209ENST00000532457 SHISA2Q6UWI4 295 aa16.74■□□□□ 0.27
PACSIN3-209ENST00000532457 SLC35B3Q9H1N7 401 aa16.74■□□□□ 0.27
PACSIN3-209ENST00000532457 HOXD3P31249 432 aaPredicted RBP16.73■□□□□ 0.27
PACSIN3-209ENST00000532457 BPIFA4PQ86YQ2 179 aa16.73■□□□□ 0.27
PACSIN3-209ENST00000532457 CYB561D1Q8N8Q1 229 aa16.73■□□□□ 0.27
PACSIN3-209ENST00000532457 KLHL30-AS1Q8NEE0 82 aa16.73■□□□□ 0.27
PACSIN3-209ENST00000532457 SMDT1Q9H4I9 107 aa16.73■□□□□ 0.27
PACSIN3-209ENST00000532457 A0A1W2PRX2 142 aa16.73■□□□□ 0.27
PACSIN3-209ENST00000532457 GGTLC3B5MD39 225 aa16.73■□□□□ 0.27
PACSIN3-209ENST00000532457 HIST1H1EP10412 219 aaKnown RBP16.73■□□□□ 0.27
PACSIN3-209ENST00000532457 FAM106AQ4KMX7 169 aa16.73■□□□□ 0.27
PACSIN3-209ENST00000532457 C8orf86Q6ZUL3 223 aa16.73■□□□□ 0.27
PACSIN3-209ENST00000532457 OR8I2Q8N0Y5 310 aa16.73■□□□□ 0.27
PACSIN3-209ENST00000532457 OR11H1Q8NG94 326 aa16.73■□□□□ 0.27
PACSIN3-209ENST00000532457 OR4F4Q96R69 305 aa16.73■□□□□ 0.27
PACSIN3-209ENST00000532457 NDUFB4O95168 129 aa16.72■□□□□ 0.27
PACSIN3-209ENST00000532457 SLURP1P55000 103 aa16.72■□□□□ 0.27
PACSIN3-209ENST00000532457 TSSC4Q9Y5U2 329 aaPredicted RBP16.72■□□□□ 0.27
PACSIN3-209ENST00000532457 SYNJ2BPP57105 145 aa16.71■□□□□ 0.27
PACSIN3-209ENST00000532457 RANP62826 216 aaKnown RBP16.71■□□□□ 0.27
PACSIN3-209ENST00000532457 SUMO1P63165 101 aaKnown RBP16.71■□□□□ 0.27
PACSIN3-209ENST00000532457 KLF5Q13887 457 aaPredicted RBP16.71■□□□□ 0.27
PACSIN3-209ENST00000532457 S100A7AQ86SG5 101 aa16.71■□□□□ 0.27
PACSIN3-209ENST00000532457 OR1N2Q8NGR9 330 aa16.71■□□□□ 0.27
PACSIN3-209ENST00000532457 A0A1W2PRE2 83 aa16.7■□□□□ 0.26
PACSIN3-209ENST00000532457 MYCNOSP40205 109 aa16.7■□□□□ 0.26
PACSIN3-209ENST00000532457 CEBPGP53567 150 aa16.7■□□□□ 0.26
PACSIN3-209ENST00000532457 C10orf91Q5T1B1 145 aa16.7■□□□□ 0.26
PACSIN3-209ENST00000532457 SPATA3Q8NHX4 192 aa16.7■□□□□ 0.26
PACSIN3-209ENST00000532457 SELENOKQ9Y6D0 94 aa16.7■□□□□ 0.26
PACSIN3-209ENST00000532457 ADARB2-AS1A8MUL3 147 aa16.7■□□□□ 0.26
PACSIN3-209ENST00000532457 TAGLN2P37802 199 aaKnown RBP16.7■□□□□ 0.26
PACSIN3-209ENST00000532457 FAM90A2PQ658T7 463 aa16.7■□□□□ 0.26
PACSIN3-209ENST00000532457 C16orf54Q6UWD8 224 aa16.7■□□□□ 0.26
PACSIN3-209ENST00000532457 RAX2Q96IS3 184 aa16.7■□□□□ 0.26
PACSIN3-209ENST00000532457 TRBV19A0A075B6N1 114 aa16.69■□□□□ 0.26
PACSIN3-209ENST00000532457 F8W036 122 aa16.69■□□□□ 0.26
PACSIN3-209ENST00000532457 LINC01619G3V211 115 aa16.69■□□□□ 0.26
PACSIN3-209ENST00000532457 K7EMT4 169 aa16.69■□□□□ 0.26
PACSIN3-209ENST00000532457 SLC17A3O00476 420 aa16.69■□□□□ 0.26
PACSIN3-209ENST00000532457 NDUFA11Q86Y39 141 aa16.69■□□□□ 0.26
PACSIN3-209ENST00000532457 ELOVL1Q9BW60 279 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms