RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 RGS21Q2M5E4 152 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 BSXQ3C1V8 233 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 LCN12Q6JVE5 192 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 ATRAIDQ6UW56 229 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 UNQ9165/PRO28630Q6UXU0 137 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 APRG1Q8IVJ8 170 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 C15orf54Q8N8G6 183 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 DUSP18Q8NEJ0 188 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 OR2K2Q8NGT1 345 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 COQ8AQ8NI60 647 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 MPLKIPQ8TAP9 179 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 DTD1Q8TEA8 209 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 ZNF436Q9C0F3 470 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 NRN1Q9NPD7 142 aa4.36□□□□□ -1.71
HMGB1P42-201ENST00000532126 RPS10-NUDT3A0A1W2PQS6 291 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 TMEM213A2RRL7 107 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 NDUFA4O00483 81 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 ATP5LO75964 103 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 YIF1AO95070 293 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 IFNA10P01566 189 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 IFNA21P01568 189 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 TCRBP04435 133 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 SLC25A6P12236 298 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 NPY1RP25929 384 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 ELLP55199 621 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 DHRS2Q13268 280 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 RIGQ13278 110 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 DEFB114Q30KQ6 69 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 C2orf83Q53S99 150 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 PVRIGQ6DKI7 326 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 ADAMTSL5Q6ZMM2 481 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 Q6ZVQ6 151 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 LYG2Q86SG7 212 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 GTSCR1Q86UQ5 136 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 RNASEH2CQ8TDP1 164 aaKnown RBP4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 TMEM190Q8WZ59 177 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 MARC2Q969Z3 335 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 C17orf77Q96MU5 243 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 C20orf85Q9H1P6 137 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 RBKSQ9H477 322 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 DAZ1Q9NQZ3 744 aaKnown RBP4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 MRPL27Q9P0M9 148 aaKnown RBP4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 SMAD5-AS1Q9Y6J3 95 aa4.35□□□□□ -1.71
HMGB1P42-201ENST00000532126 IGHV3OR16-8A0A075B7F1 116 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 IZUMO1RA6ND01 250 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 SNURFLB1AK76 121 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 K7EMT4 169 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 ZNF207O43670 478 aaKnown RBP4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 PITX3O75364 302 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 MED6O75586 246 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 ADAP1O75689 374 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 UPK1BO75841 260 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 CA1P00915 261 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 IFNA4P05014 189 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 SLC25A4P12235 298 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 PMCHP20382 165 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 B2MP61769 119 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 GAGE5Q13069 117 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 GAGE6Q13070 117 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 ASAH1Q13510 395 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 GUCA2BQ16661 112 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 C11orf87Q6NUJ2 197 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 OR4X1Q8NH49 305 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 B9D2Q9BPU9 175 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 FNDC4Q9H6D8 234 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 MLXQ9UH92 298 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 U3KQ87 197 aa4.34□□□□□ -1.71
HMGB1P42-201ENST00000532126 TRAV30A0A087WSZ9 112 aa4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 TRAV14DV4A0A0A6YYC5 116 aa4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 MPTX1A8MV57 137 aa4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 SYNGR2O43760 224 aa4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 NDUFS6O75380 124 aaKnown RBP4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 C8orf88P0DMB2 117 aa4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 IAPPP10997 89 aa4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 GATA1P15976 413 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 RND2P52198 227 aa4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 PRSS54Q6PEW0 395 aa4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 TOMM20LQ6UXN7 152 aa4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 SLC16A13Q7RTY0 426 aa4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 TMEM61Q8N0U2 210 aa4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 OR1B1Q8NGR6 318 aa4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 ENKURQ8TC29 256 aa4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 ACY3Q96HD9 319 aa4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 OR10C1Q96KK4 312 aa4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 CIB3Q96Q77 187 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 GINS3Q9BRX5 216 aa4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 MRPL36Q9P0J6 103 aaKnown RBP4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 PUS1Q9Y606 427 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB1P42-201ENST00000532126 IGHV3-49A0A0A0MS15 119 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 IGHV7-4-1A0A0J9YVY3 117 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 SIVA1O15304 175 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 IGKV1-17P01599 117 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 FRMD6-AS1P0C7T7 363 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 IGLC1P0CG04 106 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 OR10J1P30954 320 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 GPX4P36969 197 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 DEFA1P59665 94 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 DEFA3P59666 94 aa4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 POLR2GP62487 172 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB1P42-201ENST00000532126 RPL24P83731 157 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms