RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 TMEM208Q9BTX3 173 aa9.14□□□□□ -0.95
C11orf54-210ENST00000531516 SLC25A39Q9BZJ4 359 aaPredicted RBP9.14□□□□□ -0.95
C11orf54-210ENST00000531516 ARL6Q9H0F7 186 aa9.14□□□□□ -0.95
C11orf54-210ENST00000531516 PPP1R14DQ9NXH3 145 aa9.14□□□□□ -0.95
C11orf54-210ENST00000531516 LSM5Q9Y4Y9 91 aaKnown RBP9.14□□□□□ -0.95
C11orf54-210ENST00000531516 IGHV3OR16-12A0A075B7B8 117 aa9.13□□□□□ -0.95
C11orf54-210ENST00000531516 TRAV10A0A0B4J240 114 aa9.13□□□□□ -0.95
C11orf54-210ENST00000531516 TEX48A0A1B0GUV7 120 aa9.13□□□□□ -0.95
C11orf54-210ENST00000531516 C7orf66A4D0T2 115 aa9.13□□□□□ -0.95
C11orf54-210ENST00000531516 DEDDO75618 318 aa9.13□□□□□ -0.95
C11orf54-210ENST00000531516 PAX9P55771 341 aa9.13□□□□□ -0.95
C11orf54-210ENST00000531516 PLP1P60201 277 aa9.13□□□□□ -0.95
C11orf54-210ENST00000531516 HBG1P69891 147 aa9.13□□□□□ -0.95
C11orf54-210ENST00000531516 HBG2P69892 147 aa9.13□□□□□ -0.95
C11orf54-210ENST00000531516 STX12Q86Y82 276 aa9.13□□□□□ -0.95
C11orf54-210ENST00000531516 SHANK2-AS3Q9BTD1 123 aa9.13□□□□□ -0.95
C11orf54-210ENST00000531516 RCL1Q9Y2P8 373 aaKnown RBP9.13□□□□□ -0.95
C11orf54-210ENST00000531516 ELOA3CA0A087WX78 387 aaPredicted RBP9.12□□□□□ -0.95
C11orf54-210ENST00000531516 H3BRN7 92 aa9.12□□□□□ -0.95
C11orf54-210ENST00000531516 K7EPK0 472 aa9.12□□□□□ -0.95
C11orf54-210ENST00000531516 SOCS3O14543 225 aa9.12□□□□□ -0.95
C11orf54-210ENST00000531516 CCSO14618 274 aa9.12□□□□□ -0.95
C11orf54-210ENST00000531516 COX7A2P2O60397 106 aa9.12□□□□□ -0.95
C11orf54-210ENST00000531516 HBE1P02100 147 aa9.12□□□□□ -0.95
C11orf54-210ENST00000531516 RLN2P04090 185 aa9.12□□□□□ -0.95
C11orf54-210ENST00000531516 HLA-DMBP28068 263 aa9.12□□□□□ -0.95
C11orf54-210ENST00000531516 S100A10P60903 97 aa9.12□□□□□ -0.95
C11orf54-210ENST00000531516 FAM78BQ5VT40 261 aa9.12□□□□□ -0.95
C11orf54-210ENST00000531516 CSNK1G2-AS1Q8NCQ2 148 aa9.12□□□□□ -0.95
C11orf54-210ENST00000531516 ZNF738Q8NE65 137 aa9.12□□□□□ -0.95
C11orf54-210ENST00000531516 NEU1Q99519 415 aa9.12□□□□□ -0.95
C11orf54-210ENST00000531516 SEC22CQ9BRL7 303 aa9.12□□□□□ -0.95
C11orf54-210ENST00000531516 SCRT1Q9BWW7 348 aa9.12□□□□□ -0.95
C11orf54-210ENST00000531516 RFNGQ9Y644 331 aa9.12□□□□□ -0.95
C11orf54-210ENST00000531516 X6R8D5 127 aa9.12□□□□□ -0.95
C11orf54-210ENST00000531516 A0A0J9YX75 114 aa9.11□□□□□ -0.95
C11orf54-210ENST00000531516 PMS2P5A8MQ11 134 aa9.11□□□□□ -0.95
C11orf54-210ENST00000531516 IGLL5B9A064 214 aa9.11□□□□□ -0.95
C11orf54-210ENST00000531516 AGPAT2O15120 278 aa9.11□□□□□ -0.95
C11orf54-210ENST00000531516 UPK1BO75841 260 aa9.11□□□□□ -0.95
C11orf54-210ENST00000531516 SPART-AS1P0CW21 52 aa9.11□□□□□ -0.95
C11orf54-210ENST00000531516 RBMY1A1P0DJD3 496 aaKnown RBP9.11□□□□□ -0.95
C11orf54-210ENST00000531516 RBMY1CP0DJD4 496 aa9.11□□□□□ -0.95
C11orf54-210ENST00000531516 S100A11P31949 105 aa9.11□□□□□ -0.95
C11orf54-210ENST00000531516 DEFA1P59665 94 aa9.11□□□□□ -0.95
C11orf54-210ENST00000531516 DEFA3P59666 94 aa9.11□□□□□ -0.95
C11orf54-210ENST00000531516 SLC38A11Q08AI6 406 aa9.11□□□□□ -0.95
C11orf54-210ENST00000531516 ASAH1Q13510 395 aa9.11□□□□□ -0.95
C11orf54-210ENST00000531516 RBMY1FQ15415 496 aaKnown RBP9.11□□□□□ -0.95
C11orf54-210ENST00000531516 LGALS9CQ6DKI2 356 aa9.11□□□□□ -0.95
C11orf54-210ENST00000531516 BPIFA4PQ86YQ2 179 aa9.11□□□□□ -0.95
C11orf54-210ENST00000531516 ARV1Q9H2C2 271 aa9.11□□□□□ -0.95
C11orf54-210ENST00000531516 UQCC1Q9NVA1 299 aa9.11□□□□□ -0.95
C11orf54-210ENST00000531516 RYR3Q15413 4870 aa9.11□□□□□ -0.95
C11orf54-210ENST00000531516 PRAF2O60831 178 aa9.1□□□□□ -0.95
C11orf54-210ENST00000531516 CAMLGP49069 296 aa9.1□□□□□ -0.95
C11orf54-210ENST00000531516 FXYD7P58549 80 aa9.1□□□□□ -0.95
C11orf54-210ENST00000531516 B2MP61769 119 aa9.1□□□□□ -0.95
C11orf54-210ENST00000531516 GDF5OSQ5U4N7 250 aa9.1□□□□□ -0.95
C11orf54-210ENST00000531516 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.1□□□□□ -0.95
C11orf54-210ENST00000531516 TMEM182Q6ZP80 229 aaPredicted RBP9.1□□□□□ -0.95
C11orf54-210ENST00000531516 OR1L4Q8NGR5 311 aa9.1□□□□□ -0.95
C11orf54-210ENST00000531516 PFDN5Q99471 154 aa9.1□□□□□ -0.95
C11orf54-210ENST00000531516 F6UB75 175 aa9.09□□□□□ -0.95
C11orf54-210ENST00000531516 CCNKO75909 580 aa9.09□□□□□ -0.95
C11orf54-210ENST00000531516 CST7O76096 145 aa9.09□□□□□ -0.95
C11orf54-210ENST00000531516 INSP01308 110 aa9.09□□□□□ -0.95
C11orf54-210ENST00000531516 CXCL2P19875 107 aa9.09□□□□□ -0.95
C11orf54-210ENST00000531516 SULT1A1P50225 295 aa9.09□□□□□ -0.95
C11orf54-210ENST00000531516 EMP1P54849 157 aa9.09□□□□□ -0.95
C11orf54-210ENST00000531516 RHOBP62745 196 aa9.09□□□□□ -0.95
C11orf54-210ENST00000531516 CYCSP99999 105 aaKnown RBP9.09□□□□□ -0.95
C11orf54-210ENST00000531516 IFITM3Q01628 133 aa9.09□□□□□ -0.95
C11orf54-210ENST00000531516 ATP6V1FQ16864 119 aa9.09□□□□□ -0.95
C11orf54-210ENST00000531516 RRN3P1Q2M238 152 aa9.09□□□□□ -0.95
C11orf54-210ENST00000531516 C10orf113Q5VZT2 155 aa9.09□□□□□ -0.95
C11orf54-210ENST00000531516 LCN15Q6UWW0 184 aa9.09□□□□□ -0.95
C11orf54-210ENST00000531516 ZNF705AQ6ZN79 300 aaPredicted RBP9.09□□□□□ -0.95
C11orf54-210ENST00000531516 LINC00305Q7Z4B0 112 aa9.09□□□□□ -0.95
C11orf54-210ENST00000531516 UHRF2Q96PU4 802 aa9.09□□□□□ -0.95
C11orf54-210ENST00000531516 SLC50A1Q9BRV3 221 aa9.09□□□□□ -0.95
C11orf54-210ENST00000531516 SLC35B3Q9H1N7 401 aa9.09□□□□□ -0.95
C11orf54-210ENST00000531516 A0A087X0K7 114 aa9.08□□□□□ -0.96
C11orf54-210ENST00000531516 DEFB131BA0A096LNP1 70 aa9.08□□□□□ -0.96
C11orf54-210ENST00000531516 ZNF705FA8MVS1 300 aaPredicted RBP9.08□□□□□ -0.96
C11orf54-210ENST00000531516 ZNF705DP0CH99 300 aaPredicted RBP9.08□□□□□ -0.96
C11orf54-210ENST00000531516 ZNF705BP0CI00 300 aaPredicted RBP9.08□□□□□ -0.96
C11orf54-210ENST00000531516 BAXQ07812 192 aa9.08□□□□□ -0.96
C11orf54-210ENST00000531516 Q6ZTC4 211 aa9.08□□□□□ -0.96
C11orf54-210ENST00000531516 IGF2BP2-AS1Q96M15 143 aa9.08□□□□□ -0.96
C11orf54-210ENST00000531516 RNF126Q9BV68 326 aa9.08□□□□□ -0.96
C11orf54-210ENST00000531516 SLC25A31Q9H0C2 315 aa9.08□□□□□ -0.96
C11orf54-210ENST00000531516 DNAJC4Q9NNZ3 241 aa9.08□□□□□ -0.96
C11orf54-210ENST00000531516 LYRM2Q9NU23 88 aaPredicted RBP9.08□□□□□ -0.96
C11orf54-210ENST00000531516 DYNC2H1Q8NCM8 4307 aaKnown RBP9.07□□□□□ -0.96
C11orf54-210ENST00000531516 CSMD3Q7Z407 3707 aa9.07□□□□□ -0.96
C11orf54-210ENST00000531516 FAM24AA6NFZ4 105 aa9.07□□□□□ -0.96
C11orf54-210ENST00000531516 MPDU1O75352 247 aa9.07□□□□□ -0.96
C11orf54-210ENST00000531516 CNN1P51911 297 aaKnown RBP9.07□□□□□ -0.96
C11orf54-210ENST00000531516 DEFB1P60022 68 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms