RNA–Protein interactions for RNA: ENST00000531385.1

PTPRU-211, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-211ENST00000531385 UBE2L5PA0A1B0GUS4 154 aa13.65□□□□□ -0.22
PTPRU-211ENST00000531385 HLA-DRB4P13762 266 aa13.65□□□□□ -0.22
PTPRU-211ENST00000531385 FXYD7P58549 80 aa13.65□□□□□ -0.22
PTPRU-211ENST00000531385 PLP1P60201 277 aa13.65□□□□□ -0.22
PTPRU-211ENST00000531385 MORN3Q6PF18 240 aaPredicted RBP13.65□□□□□ -0.22
PTPRU-211ENST00000531385 ZNF546Q86UE3 836 aa13.65□□□□□ -0.22
PTPRU-211ENST00000531385 C16orf92Q96LL3 132 aa13.65□□□□□ -0.22
PTPRU-211ENST00000531385 GGACTQ9BVM4 153 aa13.65□□□□□ -0.22
PTPRU-211ENST00000531385 OR5AC2Q9NZP5 309 aa13.65□□□□□ -0.22
PTPRU-211ENST00000531385 HLA-DRB4X5D2U9 266 aa13.65□□□□□ -0.22
PTPRU-211ENST00000531385 CXorf65A6NEN9 183 aa13.64□□□□□ -0.23
PTPRU-211ENST00000531385 ID1P41134 155 aa13.64□□□□□ -0.23
PTPRU-211ENST00000531385 FGL1Q08830 312 aa13.64□□□□□ -0.23
PTPRU-211ENST00000531385 ARV1Q9H2C2 271 aa13.64□□□□□ -0.23
PTPRU-211ENST00000531385 UQCC1Q9NVA1 299 aa13.64□□□□□ -0.23
PTPRU-211ENST00000531385 XCL2Q9UBD3 114 aa13.64□□□□□ -0.23
PTPRU-211ENST00000531385 DNAH1Q9P2D7 4330 aa13.64□□□□□ -0.23
PTPRU-211ENST00000531385 H0YIZ8 118 aa13.63□□□□□ -0.23
PTPRU-211ENST00000531385 ISLRO14498 428 aa13.63□□□□□ -0.23
PTPRU-211ENST00000531385 PRB4P10163 310 aaPredicted RBP13.63□□□□□ -0.23
PTPRU-211ENST00000531385 SULT1A1P50225 295 aa13.63□□□□□ -0.23
PTPRU-211ENST00000531385 H2BFSP57053 126 aa13.63□□□□□ -0.23
PTPRU-211ENST00000531385 MIC13Q5XKP0 118 aa13.63□□□□□ -0.23
PTPRU-211ENST00000531385 RNF182Q8N6D2 247 aa13.63□□□□□ -0.23
PTPRU-211ENST00000531385 SAV1Q9H4B6 383 aaPredicted RBP13.63□□□□□ -0.23
PTPRU-211ENST00000531385 ALMS1Q8TCU4 4167 aa13.63□□□□□ -0.23
PTPRU-211ENST00000531385 SSNA1O43805 119 aa13.62□□□□□ -0.23
PTPRU-211ENST00000531385 SNRPCP09234 159 aaKnown RBP13.62□□□□□ -0.23
PTPRU-211ENST00000531385 MORN5Q5VZ52 161 aa13.62□□□□□ -0.23
PTPRU-211ENST00000531385 STX12Q86Y82 276 aa13.62□□□□□ -0.23
PTPRU-211ENST00000531385 WDR83OSQ9Y284 106 aa13.62□□□□□ -0.23
PTPRU-211ENST00000531385 TRAV8-2A0A0B4J237 113 aa13.61□□□□□ -0.23
PTPRU-211ENST00000531385 COX7A2P2O60397 106 aa13.61□□□□□ -0.23
PTPRU-211ENST00000531385 ATF4P18848 351 aaPredicted RBP13.61□□□□□ -0.23
PTPRU-211ENST00000531385 HLA-DMBP28068 263 aa13.61□□□□□ -0.23
PTPRU-211ENST00000531385 CAMLGP49069 296 aa13.61□□□□□ -0.23
PTPRU-211ENST00000531385 MEOX2P50222 304 aa13.61□□□□□ -0.23
PTPRU-211ENST00000531385 BAXQ07812 192 aa13.61□□□□□ -0.23
PTPRU-211ENST00000531385 VWC2Q2TAL6 325 aa13.61□□□□□ -0.23
PTPRU-211ENST00000531385 FOXI2Q6ZQN5 318 aa13.61□□□□□ -0.23
PTPRU-211ENST00000531385 Q8NAQ8 132 aa13.61□□□□□ -0.23
PTPRU-211ENST00000531385 CSNK1G2-AS1Q8NCQ2 148 aa13.61□□□□□ -0.23
PTPRU-211ENST00000531385 OR4B1Q8NGF8 309 aa13.61□□□□□ -0.23
PTPRU-211ENST00000531385 TMEM37Q8WXS4 190 aa13.61□□□□□ -0.23
PTPRU-211ENST00000531385 NMES1Q9C002 83 aa13.61□□□□□ -0.23
PTPRU-211ENST00000531385 IGHV4-28A0A0C4DH34 117 aa13.6□□□□□ -0.23
PTPRU-211ENST00000531385 LCE6AA0A183 80 aa13.6□□□□□ -0.23
PTPRU-211ENST00000531385 RPL7P18124 248 aaKnown RBP13.6□□□□□ -0.23
PTPRU-211ENST00000531385 NANOS2P60321 138 aaKnown RBP13.6□□□□□ -0.23
PTPRU-211ENST00000531385 NHLH2Q02577 135 aa13.6□□□□□ -0.23
PTPRU-211ENST00000531385 LINC00305Q7Z4B0 112 aa13.6□□□□□ -0.23
PTPRU-211ENST00000531385 GPR82Q96P67 336 aa13.6□□□□□ -0.23
PTPRU-211ENST00000531385 SLC35B3Q9H1N7 401 aa13.6□□□□□ -0.23
PTPRU-211ENST00000531385 X6R8D5 127 aa13.6□□□□□ -0.23
PTPRU-211ENST00000531385 HYDINQ4G0P3 5121 aa13.59□□□□□ -0.23
PTPRU-211ENST00000531385 MRPS12O15235 138 aaKnown RBP13.59□□□□□ -0.23
PTPRU-211ENST00000531385 ZNF705DP0CH99 300 aaPredicted RBP13.59□□□□□ -0.23
PTPRU-211ENST00000531385 ZNF705BP0CI00 300 aaPredicted RBP13.59□□□□□ -0.23
PTPRU-211ENST00000531385 RBMY1A1P0DJD3 496 aaKnown RBP13.59□□□□□ -0.23
PTPRU-211ENST00000531385 RBMY1CP0DJD4 496 aa13.59□□□□□ -0.23
PTPRU-211ENST00000531385 FGF7P21781 194 aa13.59□□□□□ -0.23
PTPRU-211ENST00000531385 S100A7P31151 101 aa13.59□□□□□ -0.23
PTPRU-211ENST00000531385 S100A11P31949 105 aa13.59□□□□□ -0.23
PTPRU-211ENST00000531385 HBG1P69891 147 aa13.59□□□□□ -0.23
PTPRU-211ENST00000531385 HBG2P69892 147 aa13.59□□□□□ -0.23
PTPRU-211ENST00000531385 RBMY1FQ15415 496 aaKnown RBP13.59□□□□□ -0.23
PTPRU-211ENST00000531385 TMEM41BQ5BJD5 291 aa13.59□□□□□ -0.23
PTPRU-211ENST00000531385 FAM78BQ5VT40 261 aa13.59□□□□□ -0.23
PTPRU-211ENST00000531385 C11orf68Q9H3H3 251 aaKnown RBP13.59□□□□□ -0.23
PTPRU-211ENST00000531385 RPRMQ9NS64 109 aa13.59□□□□□ -0.23
PTPRU-211ENST00000531385 A0A0J9YX75 114 aa13.58□□□□□ -0.24
PTPRU-211ENST00000531385 ZNF705EA8MWA4 302 aaPredicted RBP13.58□□□□□ -0.24
PTPRU-211ENST00000531385 E5RGE8 158 aa13.58□□□□□ -0.24
PTPRU-211ENST00000531385 H3BTX0 84 aa13.58□□□□□ -0.24
PTPRU-211ENST00000531385 PRR20EP86478 221 aa13.58□□□□□ -0.24
PTPRU-211ENST00000531385 PRR20CP86479 221 aa13.58□□□□□ -0.24
PTPRU-211ENST00000531385 PRR20DP86480 221 aa13.58□□□□□ -0.24
PTPRU-211ENST00000531385 PRR20BP86481 221 aa13.58□□□□□ -0.24
PTPRU-211ENST00000531385 PRR20AP86496 221 aa13.58□□□□□ -0.24
PTPRU-211ENST00000531385 OPCMLQ14982 345 aa13.58□□□□□ -0.24
PTPRU-211ENST00000531385 ZNF709Q8N972 641 aa13.58□□□□□ -0.24
PTPRU-211ENST00000531385 THAP6Q8TBB0 222 aa13.58□□□□□ -0.24
PTPRU-211ENST00000531385 PPP1R1CQ8WVI7 109 aa13.58□□□□□ -0.24
PTPRU-211ENST00000531385 ALG5Q9Y673 324 aa13.58□□□□□ -0.24
PTPRU-211ENST00000531385 RLN2P04090 185 aa13.57□□□□□ -0.24
PTPRU-211ENST00000531385 RAB31Q13636 194 aa13.57□□□□□ -0.24
PTPRU-211ENST00000531385 CLINT1Q14677 625 aa13.57□□□□□ -0.24
PTPRU-211ENST00000531385 PXDC1Q5TGL8 231 aa13.57□□□□□ -0.24
PTPRU-211ENST00000531385 SAMD13Q5VXD3 122 aa13.57□□□□□ -0.24
PTPRU-211ENST00000531385 C10orf113Q5VZT2 155 aa13.57□□□□□ -0.24
PTPRU-211ENST00000531385 EBLN2Q6P2I7 272 aa13.57□□□□□ -0.24
PTPRU-211ENST00000531385 OR5C1Q8NGR4 320 aa13.57□□□□□ -0.24
PTPRU-211ENST00000531385 A0A087X0K7 114 aa13.56□□□□□ -0.24
PTPRU-211ENST00000531385 TRAV5A0A0B4J249 113 aa13.56□□□□□ -0.24
PTPRU-211ENST00000531385 B2MP61769 119 aa13.56□□□□□ -0.24
PTPRU-211ENST00000531385 NUTF2P61970 127 aaKnown RBP13.56□□□□□ -0.24
PTPRU-211ENST00000531385 ZNF738Q8NE65 137 aa13.56□□□□□ -0.24
PTPRU-211ENST00000531385 C11orf45Q8TAV5 145 aa13.56□□□□□ -0.24
PTPRU-211ENST00000531385 RNF126Q9BV68 326 aa13.56□□□□□ -0.24
PTPRU-211ENST00000531385 PXMP4Q9Y6I8 212 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms