RNA–Protein interactions for RNA: ENST00000531141.1

CD44-233, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-233ENST00000531141 H3BSA7 217 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 KLRC4O43908 158 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 OR7C1O76099 320 aaPredicted RBP1.27□□□□□ -2.21
CD44-233ENST00000531141 CNIH1O95406 144 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 TTRP02766 147 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 HIST1H1TP22492 207 aaPredicted RBP1.27□□□□□ -2.21
CD44-233ENST00000531141 CDK9P50750 372 aaKnown RBP1.27□□□□□ -2.21
CD44-233ENST00000531141 TMEM33P57088 247 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 DCDP81605 110 aaKnown RBP1.27□□□□□ -2.21
CD44-233ENST00000531141 RSU1Q15404 277 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 ACOT6Q3I5F7 207 aaPredicted RBP1.27□□□□□ -2.21
CD44-233ENST00000531141 TEX36Q5VZQ5 186 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 SPATA31B1PQ5VZV4 182 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 LCN8Q6JVE9 175 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 EBLN2Q6P2I7 272 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 ZNF550Q7Z398 422 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 TMEM86BQ8N661 226 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 ZNF676Q8N7Q3 588 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 OR11L1Q8NGX0 322 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 OR10A6Q8NH74 314 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 MCFD2Q8NI22 146 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 ZHX1-C8orf76Q96EF9 292 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 ANKRD36BP1Q96IX9 119 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 KIFC1Q9BW19 673 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 C8orf4Q9NR00 106 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 ARMC1Q9NVT9 282 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 TAS2R7Q9NYW3 318 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 LINC00527Q9UJ94 153 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 WNK2Q9Y3S1 2297 aa1.27□□□□□ -2.21
CD44-233ENST00000531141 RNF213Q63HN8 5207 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 STARD9Q9P2P6 4700 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 A0A087WUJ7 227 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 A0A096LNT2 108 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 TGIF2-C20orf24A0A0A6YYL0 155 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 IGKV1-12A0A0C4DH73 117 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 A0A0J9YX75 114 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 EEF1E1-BLOC1S5C9J1V9 151 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 H3BRN7 92 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 IFNA1P01562 189 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 IFNA14P01570 189 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 IGKV1D-12P01611 117 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 SERPINA7P05543 415 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 CRYGDP07320 174 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 FAM228BP0C875 321 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 SLC25A16P16260 332 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 OR10J1P30954 320 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 LPAR6P43657 344 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 RWDD2BP57060 319 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 TCTAP57738 103 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 BTN3A2P78410 334 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 HLA-DRB3P79483 266 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 HPCAP84074 193 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 IFITM2Q01629 132 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 CAV1Q03135 178 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 ZNF117Q03924 483 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 PMAIP1Q13794 54 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 CDK10Q15131 360 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 TSNQ15631 228 aaKnown RBP1.26□□□□□ -2.21
CD44-233ENST00000531141 IAH1Q2TAA2 248 aaPredicted RBP1.26□□□□□ -2.21
CD44-233ENST00000531141 C5orf46Q6UWT4 87 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 SDIM1Q6ZPB5 146 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 GLT6D1Q7Z4J2 308 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 OOSP2Q86WS3 158 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 PHF13Q86YI8 300 aaPredicted RBP1.26□□□□□ -2.21
CD44-233ENST00000531141 C20orf196Q8IYI0 205 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 DEFB125Q8N687 156 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 C12orf29Q8N999 325 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 OR4X1Q8NH49 305 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 MS4A6EQ96DS6 147 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 SFRP2Q96HF1 295 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 DIRAS2Q96HU8 199 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 CAPZA3Q96KX2 299 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 SIGMAR1Q99720 223 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 TMEM109Q9BVC6 243 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 GNB1LQ9BYB4 327 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 C6orf62Q9GZU0 229 aaPredicted RBP1.26□□□□□ -2.21
CD44-233ENST00000531141 PCBD2Q9H0N5 130 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 SMDT1Q9H4I9 107 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 BIN3Q9NQY0 253 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 BATF3Q9NR55 127 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 SPANXA1Q9NS26 97 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 TXNL4BQ9NX01 149 aaKnown RBP1.26□□□□□ -2.21
CD44-233ENST00000531141 HS3ST2Q9Y278 367 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 HDGFL3Q9Y3E1 203 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 FAM215AQ9Y5M1 114 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 OR51B4Q9Y5P0 310 aa1.26□□□□□ -2.21
CD44-233ENST00000531141 DMBT1Q9UGM3 2413 aaPredicted RBP1.26□□□□□ -2.21
CD44-233ENST00000531141 MYH11P35749 1972 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 NUP210LQ5VU65 1888 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 MUC21A0A0G2JKD1 596 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 MUC21A0A140T8X8 626 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 LOC105371267A0A1B0GV96 52 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 C19orf71A6NCJ1 209 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 OR6C6A6NF89 314 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 FAM159BA6NKW6 160 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 DEFB108AA8MXU0 73 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 EVPLLA8MZ36 301 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 OR11H12B2RN74 326 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 E7EQ34 232 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 PPP5D1E7EU14 171 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms