RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 KLRD1Q13241 179 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 FAM162BQ5T6X4 162 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 MORN5Q5VZ52 161 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 CLEC2AQ6UVW9 174 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 ZNF600Q6ZNG1 722 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 LHFPL4Q7Z7J7 247 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 Q8N9W7 124 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 TMEM75Q8N9X5 138 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 NUDT10Q8NFP7 164 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 OR4B1Q8NGF8 309 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 CMTM2Q8TAZ6 248 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 RNF125Q96EQ8 232 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 NUDT11Q96G61 164 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 GRAMD2BQ96HH9 432 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 TBX15Q96SF7 602 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 CCL19Q99731 98 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 HIST1H2BLQ99880 126 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 MLST8Q9BVC4 326 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 BPESC1Q9GZL8 116 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 Q9H3A6 140 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 NAT8BQ9UHF3 227 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 ZFP30Q9Y2G7 519 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 DMRT1Q9Y5R6 373 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 DMXL2Q8TDJ6 3036 aa4.37□□□□□ -1.71
PCF11-205ENST00000530906 COL6A6A6NMZ7 2263 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 TRBV19A0A075B6N1 114 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 IGHV7-81A0A0B4J1V7 117 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 A0A1B0GW15 77 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 PGPA6NDG6 321 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 PGPEP1LA6NFU8 196 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 IFITM10A6NMD0 228 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 ZNF705GA8MUZ8 300 aaPredicted RBP4.36□□□□□ -1.71
PCF11-205ENST00000530906 VWC2LB2RUY7 222 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 H3BUA1 57 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 BMPR1BO00238 502 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 AMY1AP04745 511 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 IGLC2P0DOY2 106 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 MGST1P10620 155 aaKnown RBP4.36□□□□□ -1.71
PCF11-205ENST00000530906 SAA4P35542 130 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 UQCRFS1P47985 274 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 DLX1P56177 255 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 PAFAH1B2P68402 229 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 PSG9Q00887 426 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 KRTAP1-1Q07627 177 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 Q0VG73 95 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 JOSD1Q15040 202 aaPredicted RBP4.36□□□□□ -1.71
PCF11-205ENST00000530906 USF2Q15853 346 aaPredicted RBP4.36□□□□□ -1.71
PCF11-205ENST00000530906 OR10J3Q5JRS4 329 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 FAM209BQ5JX69 171 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 C1orf194Q5T5A4 169 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 ASPHD1Q5U4P2 390 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 Q6AWC8 147 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 ZNF491Q8N8L2 437 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 OR10D4PQ8NGN7 298 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 C10orf105Q8TEF2 133 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 TSKUQ8WUA8 353 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 CCDC140Q96MF4 163 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 GPR61Q9BZJ8 451 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 AAMDCQ9H7C9 122 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 NIT2Q9NQR4 276 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 ZNF331Q9NQX6 463 aaPredicted RBP4.36□□□□□ -1.71
PCF11-205ENST00000530906 CLEC5AQ9NY25 188 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 ZNF580Q9UK33 172 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 MOB4Q9Y3A3 225 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 ATMQ13315 3056 aa4.36□□□□□ -1.71
PCF11-205ENST00000530906 SPTBN1Q01082 2364 aaKnown RBP4.35□□□□□ -1.71
PCF11-205ENST00000530906 ATRXP46100 2492 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 TRBV7-1A0A0A6YYK4 115 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 IGHV1-69DA0A0B4J2H0 117 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 CENPVL3A0A0U1RRI6 287 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 C19orf71A6NCJ1 209 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 FAM223BA6NKX1 122 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 C19orf84I3L1E1 186 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 SLC17A3O00476 420 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 PLXNB1O43157 2135 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 NDUFS7O75251 213 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 IGHV1-69P01742 117 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 IGHV3-48P01763 117 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 AMBPP02760 352 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 IL4P05112 153 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 FABP4P15090 132 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 SLC25A16P16260 332 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 CRISP2P16562 243 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 PLA2G5P39877 138 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 CSN1S1P47710 185 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 OR5I1Q13606 314 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 Q56UQ5 140 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 PYY3Q5JQD4 70 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 COX8CQ7Z4L0 72 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 Q86TA4 180 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 FAM223AQ8IWN6 122 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 OR8I2Q8N0Y5 310 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 GBGT1Q8N5D6 347 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 BLNKQ8WV28 456 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 DAZAP1Q96EP5 407 aaKnown RBP4.35□□□□□ -1.71
PCF11-205ENST00000530906 AJUBAQ96IF1 538 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 PRSS22Q9GZN4 317 aa4.35□□□□□ -1.71
PCF11-205ENST00000530906 RPP21Q9H633 154 aaKnown RBP4.35□□□□□ -1.71
PCF11-205ENST00000530906 AURKAIP1Q9NWT8 199 aaPredicted RBP4.35□□□□□ -1.71
PCF11-205ENST00000530906 RABAC1Q9UI14 185 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms