RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 PDE6DO43924 150 aa12.77□□□□□ -0.36
PACS1-209ENST00000529757 APOC3P02656 99 aa12.77□□□□□ -0.36
PACS1-209ENST00000529757 WIPF2Q8TF74 440 aaPredicted RBP12.77□□□□□ -0.36
PACS1-209ENST00000529757 F6UZH7 168 aa12.77□□□□□ -0.37
PACS1-209ENST00000529757 NBEAP1P0C6P0 100 aa12.77□□□□□ -0.37
PACS1-209ENST00000529757 HIST1H1EP10412 219 aaKnown RBP12.77□□□□□ -0.37
PACS1-209ENST00000529757 NPPCP23582 126 aa12.77□□□□□ -0.37
PACS1-209ENST00000529757 TCTEX1D4Q5JR98 221 aa12.77□□□□□ -0.37
PACS1-209ENST00000529757 OR4F17Q8NGA8 305 aa12.77□□□□□ -0.37
PACS1-209ENST00000529757 BLNKQ8WV28 456 aa12.77□□□□□ -0.37
PACS1-209ENST00000529757 NF1P21359 2839 aa12.76□□□□□ -0.37
PACS1-209ENST00000529757 MRPS12O15235 138 aaKnown RBP12.76□□□□□ -0.37
PACS1-209ENST00000529757 ZNF207O43670 478 aaKnown RBP12.76□□□□□ -0.37
PACS1-209ENST00000529757 RPL7P18124 248 aaKnown RBP12.76□□□□□ -0.37
PACS1-209ENST00000529757 CRYBB3P26998 211 aa12.76□□□□□ -0.37
PACS1-209ENST00000529757 CDX1P47902 265 aaPredicted RBP12.76□□□□□ -0.37
PACS1-209ENST00000529757 UNQ9165/PRO28630Q6UXU0 137 aa12.76□□□□□ -0.37
PACS1-209ENST00000529757 TMEM190Q8WZ59 177 aa12.76□□□□□ -0.37
PACS1-209ENST00000529757 NKX6-2Q9C056 277 aaPredicted RBP12.76□□□□□ -0.37
PACS1-209ENST00000529757 SNRPCP09234 159 aaKnown RBP12.75□□□□□ -0.37
PACS1-209ENST00000529757 IGLC2P0DOY2 106 aa12.75□□□□□ -0.37
PACS1-209ENST00000529757 RPEL1Q2QD12 228 aa12.75□□□□□ -0.37
PACS1-209ENST00000529757 FAM106AQ4KMX7 169 aa12.75□□□□□ -0.37
PACS1-209ENST00000529757 FAM90A2PQ658T7 463 aa12.75□□□□□ -0.37
PACS1-209ENST00000529757 GPHB5Q86YW7 130 aa12.75□□□□□ -0.37
PACS1-209ENST00000529757 OR8I2Q8N0Y5 310 aa12.75□□□□□ -0.37
PACS1-209ENST00000529757 FN1P02751 2386 aaKnown RBP12.75□□□□□ -0.37
PACS1-209ENST00000529757 ZNF320A2RRD8 509 aa12.74□□□□□ -0.37
PACS1-209ENST00000529757 GGTLC3B5MD39 225 aa12.74□□□□□ -0.37
PACS1-209ENST00000529757 H3BQ15 152 aa12.74□□□□□ -0.37
PACS1-209ENST00000529757 BUB3O43684 328 aa12.74□□□□□ -0.37
PACS1-209ENST00000529757 GUCA2BQ16661 112 aa12.74□□□□□ -0.37
PACS1-209ENST00000529757 KHDC1LQ5JSQ8 128 aa12.74□□□□□ -0.37
PACS1-209ENST00000529757 CCDC28AQ8IWP9 274 aa12.74□□□□□ -0.37
PACS1-209ENST00000529757 ZNF586Q9NXT0 402 aa12.74□□□□□ -0.37
PACS1-209ENST00000529757 U3KQE9 123 aa12.74□□□□□ -0.37
PACS1-209ENST00000529757 RANP62826 216 aaKnown RBP12.73□□□□□ -0.37
PACS1-209ENST00000529757 SUMO1P63165 101 aaKnown RBP12.73□□□□□ -0.37
PACS1-209ENST00000529757 C1orf194Q5T5A4 169 aa12.73□□□□□ -0.37
PACS1-209ENST00000529757 SVBPQ8N300 66 aa12.73□□□□□ -0.37
PACS1-209ENST00000529757 C4orf3Q8WVX3 66 aa12.73□□□□□ -0.37
PACS1-209ENST00000529757 GPR82Q96P67 336 aa12.73□□□□□ -0.37
PACS1-209ENST00000529757 IGHV4OR15-8A0A075B7B6 117 aa12.73□□□□□ -0.37
PACS1-209ENST00000529757 A0A087WW49 117 aa12.73□□□□□ -0.37
PACS1-209ENST00000529757 H3BTX0 84 aa12.73□□□□□ -0.37
PACS1-209ENST00000529757 APOHP02749 345 aaPredicted RBP12.73□□□□□ -0.37
PACS1-209ENST00000529757 WFDC12Q8WWY7 111 aa12.73□□□□□ -0.37
PACS1-209ENST00000529757 RPUSD4Q96CM3 377 aaKnown RBP12.73□□□□□ -0.37
PACS1-209ENST00000529757 RNF114Q9Y508 228 aa12.73□□□□□ -0.37
PACS1-209ENST00000529757 F8P00451 2351 aa12.72□□□□□ -0.37
PACS1-209ENST00000529757 TRBV19A0A075B6N1 114 aa12.72□□□□□ -0.37
PACS1-209ENST00000529757 IGHV3OR16-13A0A075B7E8 117 aa12.72□□□□□ -0.37
PACS1-209ENST00000529757 IGHV3-49A0A0A0MS15 119 aa12.72□□□□□ -0.37
PACS1-209ENST00000529757 IGHV3-74A0A0B4J1X5 117 aa12.72□□□□□ -0.37
PACS1-209ENST00000529757 IGHV3-66A0A0C4DH42 116 aa12.72□□□□□ -0.37
PACS1-209ENST00000529757 SCO2A0A1W2PP80 73 aa12.72□□□□□ -0.37
PACS1-209ENST00000529757 C18orf65Q6ZTR6 163 aa12.72□□□□□ -0.37
PACS1-209ENST00000529757 C11orf52Q96A22 123 aa12.72□□□□□ -0.37
PACS1-209ENST00000529757 DAZ1Q9NQZ3 744 aaKnown RBP12.72□□□□□ -0.37
PACS1-209ENST00000529757 K7EMT4 169 aa12.71□□□□□ -0.37
PACS1-209ENST00000529757 HAX1O00165 279 aa12.71□□□□□ -0.37
PACS1-209ENST00000529757 NDUFB4O95168 129 aa12.71□□□□□ -0.37
PACS1-209ENST00000529757 ATF4P18848 351 aaPredicted RBP12.71□□□□□ -0.37
PACS1-209ENST00000529757 MYCNOSP40205 109 aa12.71□□□□□ -0.37
PACS1-209ENST00000529757 GALR1P47211 349 aa12.71□□□□□ -0.37
PACS1-209ENST00000529757 ZNF674Q2M3X9 581 aa12.71□□□□□ -0.37
PACS1-209ENST00000529757 FAM74A3Q4VXF1 159 aa12.71□□□□□ -0.37
PACS1-209ENST00000529757 KLHL30-AS1Q8NEE0 82 aa12.71□□□□□ -0.37
PACS1-209ENST00000529757 SMIM7Q9BQ49 75 aa12.71□□□□□ -0.37
PACS1-209ENST00000529757 NIPSNAP3BQ9BS92 247 aa12.71□□□□□ -0.37
PACS1-209ENST00000529757 ELOVL1Q9BW60 279 aa12.71□□□□□ -0.37
PACS1-209ENST00000529757 PARLQ9H300 379 aa12.71□□□□□ -0.37
PACS1-209ENST00000529757 UFC1Q9Y3C8 167 aa12.71□□□□□ -0.37
PACS1-209ENST00000529757 ZNF727A8MUV8 499 aa12.7□□□□□ -0.38
PACS1-209ENST00000529757 CD28P10747 220 aa12.7□□□□□ -0.38
PACS1-209ENST00000529757 HOXD3P31249 432 aaPredicted RBP12.7□□□□□ -0.38
PACS1-209ENST00000529757 SRSF2Q01130 221 aaKnown RBP12.7□□□□□ -0.38
PACS1-209ENST00000529757 PDE6HQ13956 83 aa12.7□□□□□ -0.38
PACS1-209ENST00000529757 GRAMD2BQ96HH9 432 aa12.7□□□□□ -0.38
PACS1-209ENST00000529757 C17orf77Q96MU5 243 aa12.7□□□□□ -0.38
PACS1-209ENST00000529757 TCEAL7Q9BRU2 100 aa12.7□□□□□ -0.38
PACS1-209ENST00000529757 Q9H3A6 140 aa12.7□□□□□ -0.38
PACS1-209ENST00000529757 OTORQ9NRC9 128 aa12.7□□□□□ -0.38
PACS1-209ENST00000529757 A0A1W2PS18 150 aa12.7□□□□□ -0.38
PACS1-209ENST00000529757 PGPA6NDG6 321 aa12.7□□□□□ -0.38
PACS1-209ENST00000529757 SNAPINO95295 136 aa12.7□□□□□ -0.38
PACS1-209ENST00000529757 TM4SF20Q53R12 229 aa12.7□□□□□ -0.38
PACS1-209ENST00000529757 C16orf54Q6UWD8 224 aa12.7□□□□□ -0.38
PACS1-209ENST00000529757 REC114Q7Z4M0 266 aa12.7□□□□□ -0.38
PACS1-209ENST00000529757 LYPD1Q8N2G4 141 aa12.7□□□□□ -0.38
PACS1-209ENST00000529757 C11orf44Q8N8P7 122 aa12.7□□□□□ -0.38
PACS1-209ENST00000529757 SMAD5-AS1Q9Y6J3 95 aa12.7□□□□□ -0.38
PACS1-209ENST00000529757 IGHV7-4-1A0A0J9YVY3 117 aa12.69□□□□□ -0.38
PACS1-209ENST00000529757 LINC01619G3V211 115 aa12.69□□□□□ -0.38
PACS1-209ENST00000529757 SLC25A5P05141 298 aaKnown RBP12.69□□□□□ -0.38
PACS1-209ENST00000529757 PROK1P58294 105 aa12.69□□□□□ -0.38
PACS1-209ENST00000529757 DEFB136Q30KP8 78 aa12.69□□□□□ -0.38
PACS1-209ENST00000529757 DPF1Q92782 380 aa12.69□□□□□ -0.38
PACS1-209ENST00000529757 A0A087X0K7 114 aa12.68□□□□□ -0.38
PACS1-209ENST00000529757 ZNF785A8K8V0 405 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms