RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 AZU1P20160 251 aa6.24□□□□□ -1.41
VPS11-203ENST00000529545 GPX4P36969 197 aaPredicted RBP6.24□□□□□ -1.41
VPS11-203ENST00000529545 ATP5IP56385 69 aaPredicted RBP6.24□□□□□ -1.41
VPS11-203ENST00000529545 LINC00310P59036 64 aa6.24□□□□□ -1.41
VPS11-203ENST00000529545 TAS2R60P59551 318 aa6.24□□□□□ -1.41
VPS11-203ENST00000529545 OR2F1Q13607 317 aa6.24□□□□□ -1.41
VPS11-203ENST00000529545 SCGB2B2Q4G0G5 96 aa6.24□□□□□ -1.41
VPS11-203ENST00000529545 RNASE12Q5GAN4 147 aaKnown RBP6.24□□□□□ -1.41
VPS11-203ENST00000529545 TMEM268Q5VZI3 342 aa6.24□□□□□ -1.41
VPS11-203ENST00000529545 ZNF493Q6ZR52 646 aa6.24□□□□□ -1.41
VPS11-203ENST00000529545 BAP18Q8IXM2 172 aa6.24□□□□□ -1.41
VPS11-203ENST00000529545 LGI3Q8N145 548 aa6.24□□□□□ -1.41
VPS11-203ENST00000529545 RXFP4Q8TDU9 374 aa6.24□□□□□ -1.41
VPS11-203ENST00000529545 ZNF503Q96F45 646 aa6.24□□□□□ -1.41
VPS11-203ENST00000529545 C20orf173Q96LM9 149 aa6.24□□□□□ -1.41
VPS11-203ENST00000529545 UHRF2Q96PU4 802 aa6.24□□□□□ -1.41
VPS11-203ENST00000529545 UPK3BQ9BT76 320 aa6.24□□□□□ -1.41
VPS11-203ENST00000529545 RSG1Q9BU20 258 aa6.24□□□□□ -1.41
VPS11-203ENST00000529545 KRTAP1-5Q9BYS1 174 aa6.24□□□□□ -1.41
VPS11-203ENST00000529545 SLC25A22Q9H936 323 aa6.24□□□□□ -1.41
VPS11-203ENST00000529545 ZNF586Q9NXT0 402 aa6.24□□□□□ -1.41
VPS11-203ENST00000529545 TRAV26-1A0A087WT03 109 aa6.23□□□□□ -1.41
VPS11-203ENST00000529545 BOLA2-SMG1P6H3BVE0 249 aa6.23□□□□□ -1.41
VPS11-203ENST00000529545 CRXO43186 299 aaPredicted RBP6.23□□□□□ -1.41
VPS11-203ENST00000529545 CFDP00746 253 aaPredicted RBP6.23□□□□□ -1.41
VPS11-203ENST00000529545 CD3DP04234 171 aa6.23□□□□□ -1.41
VPS11-203ENST00000529545 M6PRP20645 277 aa6.23□□□□□ -1.41
VPS11-203ENST00000529545 TGFBR1P36897 503 aa6.23□□□□□ -1.41
VPS11-203ENST00000529545 ERVFC1-1P60608 527 aa6.23□□□□□ -1.41
VPS11-203ENST00000529545 RHOBP62745 196 aa6.23□□□□□ -1.41
VPS11-203ENST00000529545 GAMTQ14353 236 aa6.23□□□□□ -1.41
VPS11-203ENST00000529545 MEF2DQ14814 521 aa6.23□□□□□ -1.41
VPS11-203ENST00000529545 GGNBP1Q5YKI7 109 aa6.23□□□□□ -1.41
VPS11-203ENST00000529545 TMEM144Q7Z5S9 345 aa6.23□□□□□ -1.41
VPS11-203ENST00000529545 SELENOHQ8IZQ5 122 aaKnown RBP6.23□□□□□ -1.41
VPS11-203ENST00000529545 OR1B1Q8NGR6 318 aa6.23□□□□□ -1.41
VPS11-203ENST00000529545 MARCH1Q8TCQ1 289 aa6.23□□□□□ -1.41
VPS11-203ENST00000529545 DTD1Q8TEA8 209 aa6.23□□□□□ -1.41
VPS11-203ENST00000529545 GLYATL2Q8WU03 294 aa6.23□□□□□ -1.41
VPS11-203ENST00000529545 GPR82Q96P67 336 aa6.23□□□□□ -1.41
VPS11-203ENST00000529545 SLC25A32Q9H2D1 315 aa6.23□□□□□ -1.41
VPS11-203ENST00000529545 NAA60Q9H7X0 242 aa6.23□□□□□ -1.41
VPS11-203ENST00000529545 RSL24D1Q9UHA3 163 aaKnown RBP6.23□□□□□ -1.41
VPS11-203ENST00000529545 MRPS16Q9Y3D3 137 aaKnown RBP6.23□□□□□ -1.41
VPS11-203ENST00000529545 TRAV12-2A0A075B6T6 113 aa6.22□□□□□ -1.41
VPS11-203ENST00000529545 A0A0J9YY99 117 aa6.22□□□□□ -1.41
VPS11-203ENST00000529545 PLAC8L1A1L4L8 177 aa6.22□□□□□ -1.41
VPS11-203ENST00000529545 FAM25AB3EWG3 89 aa6.22□□□□□ -1.41
VPS11-203ENST00000529545 FAM25CB3EWG5 89 aa6.22□□□□□ -1.41
VPS11-203ENST00000529545 FAM25GB3EWG6 89 aa6.22□□□□□ -1.41
VPS11-203ENST00000529545 RAB3DO95716 219 aa6.22□□□□□ -1.41
VPS11-203ENST00000529545 ELK1P19419 428 aa6.22□□□□□ -1.41
VPS11-203ENST00000529545 LSM3P62310 102 aaKnown RBP6.22□□□□□ -1.41
VPS11-203ENST00000529545 FGL1Q08830 312 aa6.22□□□□□ -1.41
VPS11-203ENST00000529545 ESRGQ1W209 222 aa6.22□□□□□ -1.41
VPS11-203ENST00000529545 ZNF738Q8NE65 137 aa6.22□□□□□ -1.41
VPS11-203ENST00000529545 OR4D5Q8NGN0 318 aa6.22□□□□□ -1.41
VPS11-203ENST00000529545 LHFPL5Q8TAF8 219 aa6.22□□□□□ -1.41
VPS11-203ENST00000529545 C18orf15Q96N68 181 aa6.22□□□□□ -1.41
VPS11-203ENST00000529545 TRGV9Q99603 122 aa6.22□□□□□ -1.41
VPS11-203ENST00000529545 SLC25A39Q9BZJ4 359 aaPredicted RBP6.22□□□□□ -1.41
VPS11-203ENST00000529545 NOP10Q9NPE3 64 aaKnown RBP6.22□□□□□ -1.41
VPS11-203ENST00000529545 SLC45A2Q9UMX9 530 aa6.22□□□□□ -1.41
VPS11-203ENST00000529545 KCNIP3Q9Y2W7 256 aa6.22□□□□□ -1.41
VPS11-203ENST00000529545 IGKV1D-37A0A075B6S9 117 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 A0A087WXM4 84 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 ZNF98A6NK75 572 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 H3BNG1 76 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 HPGDSO60760 199 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 CCR6P51684 374 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 XGP55808 180 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 LINC00315P59091 139 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 TAS2R19P59542 299 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 RAB11AP62491 216 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 HIST1H1AQ02539 215 aaPredicted RBP6.21□□□□□ -1.42
VPS11-203ENST00000529545 GPR107Q5VW38 600 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 MZT2AQ6P582 158 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 LINC00299Q6ZSB3 139 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 CCDC28AQ8IWP9 274 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 ZBTB8BQ8NAP8 495 aaPredicted RBP6.21□□□□□ -1.42
VPS11-203ENST00000529545 TMEM229BQ8NBD8 167 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 OR52I2Q8NH67 350 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 TMEM263Q8WUH6 116 aaKnown RBP6.21□□□□□ -1.42
VPS11-203ENST00000529545 C15orf40Q8WUR7 153 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 KRTAP4-7Q9BYR0 210 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 RBKSQ9H477 322 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 MTFP1Q9UDX5 166 aa6.21□□□□□ -1.42
VPS11-203ENST00000529545 H7BYZ3 331 aa6.2□□□□□ -1.42
VPS11-203ENST00000529545 RLN2P04090 185 aa6.2□□□□□ -1.42
VPS11-203ENST00000529545 ORM2P19652 201 aa6.2□□□□□ -1.42
VPS11-203ENST00000529545 SMCO1Q147U7 214 aa6.2□□□□□ -1.42
VPS11-203ENST00000529545 SURF2Q15527 256 aaPredicted RBP6.2□□□□□ -1.42
VPS11-203ENST00000529545 IGFL4Q6B9Z1 124 aa6.2□□□□□ -1.42
VPS11-203ENST00000529545 STEAP1BQ6NZ63 245 aa6.2□□□□□ -1.42
VPS11-203ENST00000529545 RNF182Q8N6D2 247 aa6.2□□□□□ -1.42
VPS11-203ENST00000529545 BPIFCQ8NFQ6 507 aa6.2□□□□□ -1.42
VPS11-203ENST00000529545 OR4D10Q8NGI6 311 aa6.2□□□□□ -1.42
VPS11-203ENST00000529545 IL22RA2Q969J5 263 aa6.2□□□□□ -1.42
VPS11-203ENST00000529545 RTBDNQ9BSG5 229 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms