RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 DIP2BQ9P265 1576 aa2.14□□□□□ -2.07
CTR9-204ENST00000529355 UBR1Q8IWV7 1749 aa2.14□□□□□ -2.07
CTR9-204ENST00000529355 NWD2Q9ULI1 1742 aa2.14□□□□□ -2.07
CTR9-204ENST00000529355 BRCA1P38398 1863 aaKnown RBP2.14□□□□□ -2.07
CTR9-204ENST00000529355 PXDNLA1KZ92 1463 aa2.14□□□□□ -2.07
CTR9-204ENST00000529355 LAMB2P55268 1798 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 ARFGEF2Q9Y6D5 1785 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 TET3O43151 1660 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 ITGB4P16144 1822 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 TSC2P49815 1807 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 TRBV24-1A0A075B6N3 115 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 LOC102724200A0A096LPH7 203 aaPredicted RBP2.13□□□□□ -2.07
CTR9-204ENST00000529355 IGHV1-3A0A0C4DH29 117 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 SPAARA0A1B0GVQ0 90 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 RBFOX3A6NFN3 312 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 OR4C45A6NMZ5 311 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 RIIAD1A6NNX1 92 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 ZNF670-ZNF695F2Z2N8 137 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 F5H5P2 479 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 F8W1H4 67 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 TMEM250H0YL14 139 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 PIRO00625 290 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 TAX1BP3O14907 124 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 NPFFO15130 113 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 CREBL2O60519 120 aaPredicted RBP2.13□□□□□ -2.07
CTR9-204ENST00000529355 DPM2O94777 84 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 SFT2D2O95562 160 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 CD8AP01732 235 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 HLA-DRB1P01911 266 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 P0C880 135 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 IGLC2P0DOY2 106 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 IGLC3P0DOY3 106 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 SLC25A4P12235 298 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 PPIBP23284 216 aaKnown RBP2.13□□□□□ -2.07
CTR9-204ENST00000529355 GADD45AP24522 165 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 CRYBB3P26998 211 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 TSPOP30536 169 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 ARL2P36404 184 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 SRP14P37108 136 aaKnown RBP2.13□□□□□ -2.07
CTR9-204ENST00000529355 CA7P43166 264 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 FOXA1P55317 472 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 MEF2CQ06413 473 aaPredicted RBP2.13□□□□□ -2.07
CTR9-204ENST00000529355 MMDQ15546 238 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 PMCHL1Q16048 86 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 LUZP6Q538Z0 58 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 TTC32Q5I0X7 151 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 MEIG1Q5JSS6 88 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 AADACL3Q5VUY0 350 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 SPATA31B1PQ5VZV4 182 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 RASL11AQ6T310 242 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 CLEC20AQ6ZU45 233 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 SSX8Q7RTT4 187 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 COMMD6Q7Z4G1 85 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 TMEM86AQ8N2M4 240 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 OR8B12Q8NGG6 310 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 KLF14Q8TD94 323 aaPredicted RBP2.13□□□□□ -2.07
CTR9-204ENST00000529355 GPR21Q99679 349 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 PMCHL2Q9BQD1 86 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 ADAT1Q9BUB4 502 aaKnown RBP2.13□□□□□ -2.07
CTR9-204ENST00000529355 TCEAL2Q9H3H9 227 aaPredicted RBP2.13□□□□□ -2.07
CTR9-204ENST00000529355 FBXL15Q9H469 300 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 VSIRQ9H7M9 311 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 ST20Q9HBF5 79 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 PARP11Q9NR21 331 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 TMEM106BQ9NUM4 274 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 OR5V1Q9UGF6 321 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 ZNF443Q9Y2A4 671 aaPredicted RBP2.13□□□□□ -2.07
CTR9-204ENST00000529355 MED31Q9Y3C7 131 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 FIS1Q9Y3D6 152 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 CEP170Q5SW79 1584 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 GBF1Q92538 1859 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 MRC1P22897 1456 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 PXDNQ92626 1479 aa2.13□□□□□ -2.07
CTR9-204ENST00000529355 NUMA1Q14980 2115 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 CASP8AP2Q9UKL3 1982 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 SCN10AQ9Y5Y9 1956 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 C3P01024 1663 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 TMEM131Q92545 1883 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 NYNRINQ9P2P1 1898 aaKnown RBP2.12□□□□□ -2.07
CTR9-204ENST00000529355 DDX60Q8IY21 1712 aaKnown RBP2.12□□□□□ -2.07
CTR9-204ENST00000529355 SAMD9LQ8IVG5 1584 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 FXYD6-FXYD2A0A087WZ82 144 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 IGKV3D-11A0A0A0MRZ8 115 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 IGHV3OR16-9A0A0B4J2B5 98 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 TEX50A0A1B0GTY4 177 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 GGTLC3B5MD39 225 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 EEF1E1-BLOC1S5C9J1V9 151 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 H3BRM9 83 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 EEF1E1O43324 174 aaKnown RBP2.12□□□□□ -2.07
CTR9-204ENST00000529355 GYPAP02724 150 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 REG1AP05451 166 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 ATP5G1P05496 136 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 LGALS1P09382 135 aaKnown RBP2.12□□□□□ -2.07
CTR9-204ENST00000529355 OR5AL1P0C617 328 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 IFITM1P13164 125 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 CXCL3P19876 107 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 RPS4Y1P22090 263 aaKnown RBP2.12□□□□□ -2.07
CTR9-204ENST00000529355 PRSS3P35030 304 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 ATP5G3P48201 142 aa2.12□□□□□ -2.07
CTR9-204ENST00000529355 MARCKSL1P49006 195 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms