RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 HERC2O95714 4834 aa9.28□□□□□ -0.92
CPSF1-204ENST00000529288 IGLV2-18A0A075B6J9 118 aa9.28□□□□□ -0.92
CPSF1-204ENST00000529288 ADAP1O75689 374 aa9.28□□□□□ -0.92
CPSF1-204ENST00000529288 UBE2MP61081 183 aaKnown RBP9.28□□□□□ -0.92
CPSF1-204ENST00000529288 POLR2GP62487 172 aaKnown RBP eCLIP9.28□□□□□ -0.92
CPSF1-204ENST00000529288 RRN3P1Q2M238 152 aa9.28□□□□□ -0.92
CPSF1-204ENST00000529288 SAMD13Q5VXD3 122 aa9.28□□□□□ -0.92
CPSF1-204ENST00000529288 ACOT7LQ6ZUV0 252 aa9.28□□□□□ -0.92
CPSF1-204ENST00000529288 C1orf158Q8N1D5 194 aa9.28□□□□□ -0.92
CPSF1-204ENST00000529288 YTHDF2Q9Y5A9 579 aaKnown RBP9.28□□□□□ -0.92
CPSF1-204ENST00000529288 C9orf170A2RU37 121 aa9.27□□□□□ -0.93
CPSF1-204ENST00000529288 IL5P05113 134 aa9.27□□□□□ -0.93
CPSF1-204ENST00000529288 S100A7P31151 101 aa9.27□□□□□ -0.93
CPSF1-204ENST00000529288 PAX9P55771 341 aa9.27□□□□□ -0.93
CPSF1-204ENST00000529288 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.27□□□□□ -0.93
CPSF1-204ENST00000529288 LINC00336Q6ZUF6 198 aa9.27□□□□□ -0.93
CPSF1-204ENST00000529288 RNF182Q8N6D2 247 aa9.27□□□□□ -0.93
CPSF1-204ENST00000529288 CLUHP3Q96NS8 147 aa9.27□□□□□ -0.93
CPSF1-204ENST00000529288 CCDC32Q9BV29 185 aa9.27□□□□□ -0.93
CPSF1-204ENST00000529288 PSENENQ9NZ42 101 aa9.27□□□□□ -0.93
CPSF1-204ENST00000529288 PTTG2Q9NZH5 202 aa9.27□□□□□ -0.93
CPSF1-204ENST00000529288 HECTD4Q9Y4D8 3996 aa9.26□□□□□ -0.93
CPSF1-204ENST00000529288 TEX48A0A1B0GUV7 120 aa9.26□□□□□ -0.93
CPSF1-204ENST00000529288 PRSS29PA6NIE9 313 aa9.26□□□□□ -0.93
CPSF1-204ENST00000529288 ZNF705GA8MUZ8 300 aaPredicted RBP9.26□□□□□ -0.93
CPSF1-204ENST00000529288 PRSS46E5RG02 174 aa9.26□□□□□ -0.93
CPSF1-204ENST00000529288 LYRM1O43325 122 aa9.26□□□□□ -0.93
CPSF1-204ENST00000529288 SSSCA1O60232 199 aa9.26□□□□□ -0.93
CPSF1-204ENST00000529288 DUSP14O95147 198 aaKnown RBP9.26□□□□□ -0.93
CPSF1-204ENST00000529288 SCGB1D2O95969 90 aa9.26□□□□□ -0.93
CPSF1-204ENST00000529288 PRM2P04554 102 aa9.26□□□□□ -0.93
CPSF1-204ENST00000529288 OR5G3P0C626 314 aa9.26□□□□□ -0.93
CPSF1-204ENST00000529288 PRB4P10163 310 aaPredicted RBP9.26□□□□□ -0.93
CPSF1-204ENST00000529288 ANXA7P20073 488 aaKnown RBP9.26□□□□□ -0.93
CPSF1-204ENST00000529288 CNN1P51911 297 aaKnown RBP9.26□□□□□ -0.93
CPSF1-204ENST00000529288 RAP2BP61225 183 aa9.26□□□□□ -0.93
CPSF1-204ENST00000529288 DAD1P61803 113 aa9.26□□□□□ -0.93
CPSF1-204ENST00000529288 RRAS2P62070 204 aaPredicted RBP9.26□□□□□ -0.93
CPSF1-204ENST00000529288 SPINK13Q1W4C9 94 aa9.26□□□□□ -0.93
CPSF1-204ENST00000529288 CYP2G1PQ6ZSU1 146 aa9.26□□□□□ -0.93
CPSF1-204ENST00000529288 ZNF738Q8NE65 137 aa9.26□□□□□ -0.93
CPSF1-204ENST00000529288 PPP1R14DQ9NXH3 145 aa9.26□□□□□ -0.93
CPSF1-204ENST00000529288 SLC45A2Q9UMX9 530 aa9.26□□□□□ -0.93
CPSF1-204ENST00000529288 M0R2Z0 102 aa9.25□□□□□ -0.93
CPSF1-204ENST00000529288 HYPMO75409 117 aa9.25□□□□□ -0.93
CPSF1-204ENST00000529288 OR4E1P0C645 316 aa9.25□□□□□ -0.93
CPSF1-204ENST00000529288 RHOBP62745 196 aa9.25□□□□□ -0.93
CPSF1-204ENST00000529288 TMEM144Q7Z5S9 345 aa9.25□□□□□ -0.93
CPSF1-204ENST00000529288 LRRC20Q8TCA0 184 aa9.25□□□□□ -0.93
CPSF1-204ENST00000529288 IGF2BP2-AS1Q96M15 143 aa9.25□□□□□ -0.93
CPSF1-204ENST00000529288 C17orf77Q96MU5 243 aa9.25□□□□□ -0.93
CPSF1-204ENST00000529288 GPR82Q96P67 336 aa9.25□□□□□ -0.93
CPSF1-204ENST00000529288 SLC25A39Q9BZJ4 359 aaPredicted RBP9.25□□□□□ -0.93
CPSF1-204ENST00000529288 C20orf85Q9H1P6 137 aa9.25□□□□□ -0.93
CPSF1-204ENST00000529288 HIGD1AQ9Y241 93 aa9.25□□□□□ -0.93
CPSF1-204ENST00000529288 TRAV8-2A0A0B4J237 113 aa9.24□□□□□ -0.93
CPSF1-204ENST00000529288 CENPXA8MT69 81 aa9.24□□□□□ -0.93
CPSF1-204ENST00000529288 CCNKO75909 580 aa9.24□□□□□ -0.93
CPSF1-204ENST00000529288 INSP01308 110 aa9.24□□□□□ -0.93
CPSF1-204ENST00000529288 IFITM3Q01628 133 aa9.24□□□□□ -0.93
CPSF1-204ENST00000529288 C4orf46Q504U0 113 aa9.24□□□□□ -0.93
CPSF1-204ENST00000529288 TMEM88Q6PEY1 159 aa9.24□□□□□ -0.93
CPSF1-204ENST00000529288 OR11H7Q8NGC8 314 aa9.24□□□□□ -0.93
CPSF1-204ENST00000529288 OR4D5Q8NGN0 318 aa9.24□□□□□ -0.93
CPSF1-204ENST00000529288 S100ZQ8WXG8 99 aa9.24□□□□□ -0.93
CPSF1-204ENST00000529288 DNAH2Q9P225 4427 aa9.24□□□□□ -0.93
CPSF1-204ENST00000529288 TRAV12-2A0A075B6T6 113 aa9.23□□□□□ -0.93
CPSF1-204ENST00000529288 H3BRN7 92 aa9.23□□□□□ -0.93
CPSF1-204ENST00000529288 METTL15P1P0C7V9 234 aa9.23□□□□□ -0.93
CPSF1-204ENST00000529288 LINC00869P0C866 280 aa9.23□□□□□ -0.93
CPSF1-204ENST00000529288 DEFB130BP0DP73 79 aa9.23□□□□□ -0.93
CPSF1-204ENST00000529288 DEFB130AP0DP74 79 aa9.23□□□□□ -0.93
CPSF1-204ENST00000529288 HTN1P15515 57 aa9.23□□□□□ -0.93
CPSF1-204ENST00000529288 ID3Q02535 119 aa9.23□□□□□ -0.93
CPSF1-204ENST00000529288 HIST1H1AQ02539 215 aaPredicted RBP9.23□□□□□ -0.93
CPSF1-204ENST00000529288 AMTNQ6UX39 209 aa9.23□□□□□ -0.93
CPSF1-204ENST00000529288 BAP18Q8IXM2 172 aa9.23□□□□□ -0.93
CPSF1-204ENST00000529288 FAM210BQ96KR6 192 aa9.23□□□□□ -0.93
CPSF1-204ENST00000529288 UHRF2Q96PU4 802 aa9.23□□□□□ -0.93
CPSF1-204ENST00000529288 SHANK2-AS3Q9BTD1 123 aa9.23□□□□□ -0.93
CPSF1-204ENST00000529288 ARL6Q9H0F7 186 aa9.23□□□□□ -0.93
CPSF1-204ENST00000529288 BATF3Q9NR55 127 aa9.23□□□□□ -0.93
CPSF1-204ENST00000529288 GSKIPQ9P0R6 139 aa9.23□□□□□ -0.93
CPSF1-204ENST00000529288 RTL8CO15255 209 aa9.22□□□□□ -0.93
CPSF1-204ENST00000529288 TCRBP04435 133 aa9.22□□□□□ -0.93
CPSF1-204ENST00000529288 SNRPCP09234 159 aaKnown RBP9.22□□□□□ -0.93
CPSF1-204ENST00000529288 RPL7P18124 248 aaKnown RBP9.22□□□□□ -0.93
CPSF1-204ENST00000529288 ASAH1Q13510 395 aa9.22□□□□□ -0.93
CPSF1-204ENST00000529288 MITD1Q8WV92 249 aa9.22□□□□□ -0.93
CPSF1-204ENST00000529288 SMIM8Q96KF7 97 aa9.22□□□□□ -0.93
CPSF1-204ENST00000529288 LINC01587Q99440 93 aa9.22□□□□□ -0.93
CPSF1-204ENST00000529288 MGAT4CQ9UBM8 478 aa9.22□□□□□ -0.93
CPSF1-204ENST00000529288 DNAH17Q9UFH2 4485 aa9.21□□□□□ -0.93
CPSF1-204ENST00000529288 UPK1BO75841 260 aa9.21□□□□□ -0.94
CPSF1-204ENST00000529288 SLC38A11Q08AI6 406 aa9.21□□□□□ -0.94
CPSF1-204ENST00000529288 OXA1LQ15070 435 aa9.21□□□□□ -0.94
CPSF1-204ENST00000529288 FCN2Q15485 313 aa9.21□□□□□ -0.94
CPSF1-204ENST00000529288 IAH1Q2TAA2 248 aaPredicted RBP9.21□□□□□ -0.94
CPSF1-204ENST00000529288 LGALS9BQ3B8N2 356 aa9.21□□□□□ -0.94
CPSF1-204ENST00000529288 S100A7AQ86SG5 101 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms