RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 IFNA10P01566 189 aa10.38□□□□□ -0.75
CAPN1-212ENST00000527887 IFNA4P05014 189 aa10.38□□□□□ -0.75
CAPN1-212ENST00000527887 RD3LP0DJH9 198 aa10.38□□□□□ -0.75
CAPN1-212ENST00000527887 TPT1P13693 172 aaKnown RBP10.38□□□□□ -0.75
CAPN1-212ENST00000527887 GPX4P36969 197 aaPredicted RBP10.38□□□□□ -0.75
CAPN1-212ENST00000527887 ATP6V1FQ16864 119 aa10.38□□□□□ -0.75
CAPN1-212ENST00000527887 BAP18Q8IXM2 172 aa10.38□□□□□ -0.75
CAPN1-212ENST00000527887 FAM24BQ8N5W8 94 aa10.38□□□□□ -0.75
CAPN1-212ENST00000527887 C11orf45Q8TAV5 145 aa10.38□□□□□ -0.75
CAPN1-212ENST00000527887 DCANP1Q8TF63 244 aa10.38□□□□□ -0.75
CAPN1-212ENST00000527887 NPIPB3Q92617 1050 aa10.38□□□□□ -0.75
CAPN1-212ENST00000527887 PARD6GQ9BYG4 376 aaPredicted RBP10.38□□□□□ -0.75
CAPN1-212ENST00000527887 ARV1Q9H2C2 271 aa10.38□□□□□ -0.75
CAPN1-212ENST00000527887 CYTL1Q9NRR1 136 aa10.38□□□□□ -0.75
CAPN1-212ENST00000527887 PAIP2BQ9ULR5 123 aaKnown RBP10.38□□□□□ -0.75
CAPN1-212ENST00000527887 STRAPQ9Y3F4 350 aaKnown RBP10.38□□□□□ -0.75
CAPN1-212ENST00000527887 IGSF23A1L1A6 192 aa10.37□□□□□ -0.75
CAPN1-212ENST00000527887 FAM24AA6NFZ4 105 aa10.37□□□□□ -0.75
CAPN1-212ENST00000527887 IL4P05112 153 aa10.37□□□□□ -0.75
CAPN1-212ENST00000527887 TCTAP57738 103 aa10.37□□□□□ -0.75
CAPN1-212ENST00000527887 TRPT1Q86TN4 253 aaKnown RBP10.37□□□□□ -0.75
CAPN1-212ENST00000527887 TMEM170AQ8WVE7 144 aa10.37□□□□□ -0.75
CAPN1-212ENST00000527887 GLMPQ8WWB7 406 aa10.37□□□□□ -0.75
CAPN1-212ENST00000527887 GGACTQ9BVM4 153 aa10.37□□□□□ -0.75
CAPN1-212ENST00000527887 ZNF471Q9BX82 626 aaPredicted RBP10.37□□□□□ -0.75
CAPN1-212ENST00000527887 FBXL17Q9UF56 701 aa10.37□□□□□ -0.75
CAPN1-212ENST00000527887 BUB3O43684 328 aa10.36□□□□□ -0.75
CAPN1-212ENST00000527887 FABP1P07148 127 aa10.36□□□□□ -0.75
CAPN1-212ENST00000527887 ZNF688P0C7X2 276 aa10.36□□□□□ -0.75
CAPN1-212ENST00000527887 SNRPD3P62318 126 aaKnown RBP10.36□□□□□ -0.75
CAPN1-212ENST00000527887 NHLH2Q02577 135 aa10.36□□□□□ -0.75
CAPN1-212ENST00000527887 NDUFA5Q16718 116 aa10.36□□□□□ -0.75
CAPN1-212ENST00000527887 LRRC20Q8TCA0 184 aa10.36□□□□□ -0.75
CAPN1-212ENST00000527887 ACY3Q96HD9 319 aa10.36□□□□□ -0.75
CAPN1-212ENST00000527887 HRH4Q9H3N8 390 aa10.36□□□□□ -0.75
CAPN1-212ENST00000527887 FNDC10F2Z333 226 aa10.35□□□□□ -0.75
CAPN1-212ENST00000527887 IAPPP10997 89 aa10.35□□□□□ -0.75
CAPN1-212ENST00000527887 PSG1P11464 419 aa10.35□□□□□ -0.75
CAPN1-212ENST00000527887 MIFP14174 115 aa10.35□□□□□ -0.75
CAPN1-212ENST00000527887 NUTF2P61970 127 aaKnown RBP10.35□□□□□ -0.75
CAPN1-212ENST00000527887 USF2Q15853 346 aaPredicted RBP10.35□□□□□ -0.75
CAPN1-212ENST00000527887 SPANXN5Q5MJ07 72 aa10.35□□□□□ -0.75
CAPN1-212ENST00000527887 LGALS9CQ6DKI2 356 aa10.35□□□□□ -0.75
CAPN1-212ENST00000527887 OR8G2PQ6IF36 304 aa10.35□□□□□ -0.75
CAPN1-212ENST00000527887 OR10P1Q8NGE3 313 aa10.35□□□□□ -0.75
CAPN1-212ENST00000527887 OR51G1Q8NGK1 321 aa10.35□□□□□ -0.75
CAPN1-212ENST00000527887 NRN1Q9NPD7 142 aa10.35□□□□□ -0.75
CAPN1-212ENST00000527887 ZNF705EA8MWA4 302 aaPredicted RBP10.34□□□□□ -0.75
CAPN1-212ENST00000527887 C11orf94C9JXX5 98 aa10.34□□□□□ -0.75
CAPN1-212ENST00000527887 NXPH3O95157 252 aa10.34□□□□□ -0.75
CAPN1-212ENST00000527887 SEC11BP0C7V7 166 aa10.34□□□□□ -0.75
CAPN1-212ENST00000527887 RAB11AP62491 216 aa10.34□□□□□ -0.75
CAPN1-212ENST00000527887 OR5C1Q8NGR4 320 aa10.34□□□□□ -0.75
CAPN1-212ENST00000527887 GNPNAT1Q96EK6 184 aaPredicted RBP10.34□□□□□ -0.75
CAPN1-212ENST00000527887 SLC35E1Q96K37 410 aa10.34□□□□□ -0.75
CAPN1-212ENST00000527887 ATP5SQ99766 215 aa10.34□□□□□ -0.75
CAPN1-212ENST00000527887 C1QTNF4Q9BXJ3 329 aa10.34□□□□□ -0.75
CAPN1-212ENST00000527887 PMS2P5A8MQ11 134 aa10.33□□□□□ -0.76
CAPN1-212ENST00000527887 CST7O76096 145 aa10.33□□□□□ -0.76
CAPN1-212ENST00000527887 CFDP00746 253 aaPredicted RBP10.33□□□□□ -0.76
CAPN1-212ENST00000527887 GIG44P09565 113 aaPredicted RBP10.33□□□□□ -0.76
CAPN1-212ENST00000527887 NANOS2P60321 138 aaKnown RBP10.33□□□□□ -0.76
CAPN1-212ENST00000527887 RAB14P61106 215 aa10.33□□□□□ -0.76
CAPN1-212ENST00000527887 VWC2Q2TAL6 325 aa10.33□□□□□ -0.76
CAPN1-212ENST00000527887 PSMG4Q5JS54 123 aa10.33□□□□□ -0.76
CAPN1-212ENST00000527887 ACTL10Q5JWF8 245 aa10.33□□□□□ -0.76
CAPN1-212ENST00000527887 C1orf194Q5T5A4 169 aa10.33□□□□□ -0.76
CAPN1-212ENST00000527887 RPL7L1Q6DKI1 246 aaKnown RBP10.33□□□□□ -0.76
CAPN1-212ENST00000527887 SIGLEC15Q6ZMC9 328 aa10.33□□□□□ -0.76
CAPN1-212ENST00000527887 Q8NAQ8 132 aa10.33□□□□□ -0.76
CAPN1-212ENST00000527887 C2CD4CQ8TF44 421 aa10.33□□□□□ -0.76
CAPN1-212ENST00000527887 RNF125Q96EQ8 232 aa10.33□□□□□ -0.76
CAPN1-212ENST00000527887 SLC25A32Q9H2D1 315 aa10.33□□□□□ -0.76
CAPN1-212ENST00000527887 ZFP92A6NM28 416 aa10.32□□□□□ -0.76
CAPN1-212ENST00000527887 KNCNA6PVL3 124 aa10.32□□□□□ -0.76
CAPN1-212ENST00000527887 IFNA5P01569 189 aa10.32□□□□□ -0.76
CAPN1-212ENST00000527887 METTL15P1P0C7V9 234 aa10.32□□□□□ -0.76
CAPN1-212ENST00000527887 RAB5CP51148 216 aa10.32□□□□□ -0.76
CAPN1-212ENST00000527887 GAMTQ14353 236 aa10.32□□□□□ -0.76
CAPN1-212ENST00000527887 CLLU1Q5K131 121 aa10.32□□□□□ -0.76
CAPN1-212ENST00000527887 H3BP45 60 aa10.31□□□□□ -0.76
CAPN1-212ENST00000527887 MPDU1O75352 247 aa10.31□□□□□ -0.76
CAPN1-212ENST00000527887 DLK1P80370 383 aa10.31□□□□□ -0.76
CAPN1-212ENST00000527887 SLC38A11Q08AI6 406 aa10.31□□□□□ -0.76
CAPN1-212ENST00000527887 SAMD13Q5VXD3 122 aa10.31□□□□□ -0.76
CAPN1-212ENST00000527887 CSNK1G2-AS1Q8NCQ2 148 aa10.31□□□□□ -0.76
CAPN1-212ENST00000527887 RNF141Q8WVD5 230 aa10.31□□□□□ -0.76
CAPN1-212ENST00000527887 TRGV9Q99603 122 aa10.31□□□□□ -0.76
CAPN1-212ENST00000527887 TMEM147Q9BVK8 224 aa10.31□□□□□ -0.76
CAPN1-212ENST00000527887 WFDC1Q9HC57 220 aa10.31□□□□□ -0.76
CAPN1-212ENST00000527887 KMT2AQ03164 3969 aa10.31□□□□□ -0.76
CAPN1-212ENST00000527887 IGHV4-28A0A0C4DH34 117 aa10.3□□□□□ -0.76
CAPN1-212ENST00000527887 UMAD1C9J7I0 102 aa10.3□□□□□ -0.76
CAPN1-212ENST00000527887 PRSS46E5RG02 174 aa10.3□□□□□ -0.76
CAPN1-212ENST00000527887 H3BMM0 161 aa10.3□□□□□ -0.76
CAPN1-212ENST00000527887 S100A7P31151 101 aa10.3□□□□□ -0.76
CAPN1-212ENST00000527887 ID1P41134 155 aa10.3□□□□□ -0.76
CAPN1-212ENST00000527887 SAT2Q96F10 170 aaPredicted RBP10.3□□□□□ -0.76
CAPN1-212ENST00000527887 PSMG3Q9BT73 122 aaPredicted RBP10.3□□□□□ -0.76
CAPN1-212ENST00000527887 PBDC1Q9BVG4 233 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms