RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 SCGB2A1O75556 95 aa12.08□□□□□ -0.48
USH1C-207ENST00000527720 OR2J3O76001 311 aa12.08□□□□□ -0.48
USH1C-207ENST00000527720 GPX1P07203 203 aa12.08□□□□□ -0.48
USH1C-207ENST00000527720 UBE2E1P51965 193 aa12.08□□□□□ -0.48
USH1C-207ENST00000527720 SIGLECL1Q8N7X8 197 aa12.08□□□□□ -0.48
USH1C-207ENST00000527720 TMEM75Q8N9X5 138 aa12.08□□□□□ -0.48
USH1C-207ENST00000527720 DAZAP1Q96EP5 407 aaKnown RBP12.08□□□□□ -0.48
USH1C-207ENST00000527720 HSPB9Q9BQS6 159 aa12.08□□□□□ -0.48
USH1C-207ENST00000527720 A0A1B0GXF2 115 aa12.07□□□□□ -0.48
USH1C-207ENST00000527720 NPIPB6E9PJ23 425 aa12.07□□□□□ -0.48
USH1C-207ENST00000527720 MRPS12O15235 138 aaKnown RBP12.07□□□□□ -0.48
USH1C-207ENST00000527720 TOX4O94842 621 aa12.07□□□□□ -0.48
USH1C-207ENST00000527720 HLA-DRB1P01911 266 aa12.07□□□□□ -0.48
USH1C-207ENST00000527720 FAM106CPP0CH98 169 aa12.07□□□□□ -0.48
USH1C-207ENST00000527720 SLAQ13239 276 aa12.07□□□□□ -0.48
USH1C-207ENST00000527720 KLF17Q5JT82 389 aaPredicted RBP12.07□□□□□ -0.48
USH1C-207ENST00000527720 OR4B1Q8NGF8 309 aa12.07□□□□□ -0.48
USH1C-207ENST00000527720 K7EQM0 130 aa12.07□□□□□ -0.48
USH1C-207ENST00000527720 NDUFS7O75251 213 aa12.07□□□□□ -0.48
USH1C-207ENST00000527720 IGLV2-11P01706 119 aa12.07□□□□□ -0.48
USH1C-207ENST00000527720 NDPQ00604 133 aa12.07□□□□□ -0.48
USH1C-207ENST00000527720 PDE6HQ13956 83 aa12.07□□□□□ -0.48
USH1C-207ENST00000527720 C1orf194Q5T5A4 169 aa12.07□□□□□ -0.48
USH1C-207ENST00000527720 LINC00322Q6ZN03 302 aaPredicted RBP12.07□□□□□ -0.48
USH1C-207ENST00000527720 EXOC3-AS1Q8N2X6 119 aa12.07□□□□□ -0.48
USH1C-207ENST00000527720 C21orf62Q9NYP8 219 aa12.07□□□□□ -0.48
USH1C-207ENST00000527720 WNK2Q9Y3S1 2297 aa12.06□□□□□ -0.48
USH1C-207ENST00000527720 FCGR2BP31994 310 aaPredicted RBP12.06□□□□□ -0.48
USH1C-207ENST00000527720 SIGLEC15Q6ZMC9 328 aa12.06□□□□□ -0.48
USH1C-207ENST00000527720 GOLT1AQ6ZVE7 132 aa12.06□□□□□ -0.48
USH1C-207ENST00000527720 TXN2Q99757 166 aa12.06□□□□□ -0.48
USH1C-207ENST00000527720 NDUFAF3Q9BU61 184 aa12.06□□□□□ -0.48
USH1C-207ENST00000527720 ZFP30Q9Y2G7 519 aa12.06□□□□□ -0.48
USH1C-207ENST00000527720 POLR3KQ9Y2Y1 108 aaPredicted RBP12.06□□□□□ -0.48
USH1C-207ENST00000527720 F8W735 103 aaPredicted RBP12.06□□□□□ -0.48
USH1C-207ENST00000527720 KLF5Q13887 457 aaPredicted RBP12.06□□□□□ -0.48
USH1C-207ENST00000527720 ZNF414Q96IQ9 312 aa12.06□□□□□ -0.48
USH1C-207ENST00000527720 KIR2DL5BA0A0G2JN68 375 aa12.05□□□□□ -0.48
USH1C-207ENST00000527720 KIR2DL5BA0A0G2JPC4 375 aa12.05□□□□□ -0.48
USH1C-207ENST00000527720 A0A1W2PS18 150 aa12.05□□□□□ -0.48
USH1C-207ENST00000527720 HBBP68871 147 aa12.05□□□□□ -0.48
USH1C-207ENST00000527720 Q56UQ5 140 aa12.05□□□□□ -0.48
USH1C-207ENST00000527720 GDF5OSQ5U4N7 250 aa12.05□□□□□ -0.48
USH1C-207ENST00000527720 UNQ6494/PRO21346Q6UXR6 183 aa12.05□□□□□ -0.48
USH1C-207ENST00000527720 KIR2DL5AQ8N109 375 aa12.05□□□□□ -0.48
USH1C-207ENST00000527720 Q8N9W7 124 aa12.05□□□□□ -0.48
USH1C-207ENST00000527720 C18orf32Q8TCD1 76 aa12.05□□□□□ -0.48
USH1C-207ENST00000527720 TBX15Q96SF7 602 aa12.05□□□□□ -0.48
USH1C-207ENST00000527720 LPAR2Q9HBW0 351 aa12.05□□□□□ -0.48
USH1C-207ENST00000527720 IGHV7-81A0A0B4J1V7 117 aa12.04□□□□□ -0.48
USH1C-207ENST00000527720 ZNF705FA8MVS1 300 aaPredicted RBP12.04□□□□□ -0.48
USH1C-207ENST00000527720 ZNF705DP0CH99 300 aaPredicted RBP12.04□□□□□ -0.48
USH1C-207ENST00000527720 ZNF705BP0CI00 300 aaPredicted RBP12.04□□□□□ -0.48
USH1C-207ENST00000527720 LMO4P61968 165 aa12.04□□□□□ -0.48
USH1C-207ENST00000527720 KLK9Q2XQG4 91 aa12.04□□□□□ -0.48
USH1C-207ENST00000527720 LBHQ53QV2 105 aaPredicted RBP12.04□□□□□ -0.48
USH1C-207ENST00000527720 TEX43Q6ZNM6 134 aa12.04□□□□□ -0.48
USH1C-207ENST00000527720 RBPMS2Q6ZRY4 209 aaKnown RBP12.04□□□□□ -0.48
USH1C-207ENST00000527720 RCHY1Q96PM5 261 aa12.04□□□□□ -0.48
USH1C-207ENST00000527720 KLK9Q9UKQ9 250 aa12.04□□□□□ -0.48
USH1C-207ENST00000527720 VWC2LB2RUY7 222 aa12.04□□□□□ -0.48
USH1C-207ENST00000527720 ZNF324O75467 553 aaPredicted RBP12.04□□□□□ -0.48
USH1C-207ENST00000527720 EGR2P11161 476 aaPredicted RBP12.04□□□□□ -0.48
USH1C-207ENST00000527720 COL8A1P27658 744 aa12.04□□□□□ -0.48
USH1C-207ENST00000527720 S100A7P31151 101 aa12.04□□□□□ -0.48
USH1C-207ENST00000527720 C16orf54Q6UWD8 224 aa12.04□□□□□ -0.48
USH1C-207ENST00000527720 PRNTQ86SH4 94 aa12.04□□□□□ -0.48
USH1C-207ENST00000527720 ARL6IP6Q8N6S5 226 aa12.04□□□□□ -0.48
USH1C-207ENST00000527720 TRAV8-1A0A0A6YYK1 113 aa12.03□□□□□ -0.48
USH1C-207ENST00000527720 SERTM2A0A1B0GWG4 89 aa12.03□□□□□ -0.48
USH1C-207ENST00000527720 AMTP48728 403 aa12.03□□□□□ -0.48
USH1C-207ENST00000527720 TOMM20LQ6UXN7 152 aa12.03□□□□□ -0.48
USH1C-207ENST00000527720 TCF24Q7RTU0 167 aa12.03□□□□□ -0.48
USH1C-207ENST00000527720 VN1R17PQ8TDU5 208 aa12.03□□□□□ -0.48
USH1C-207ENST00000527720 GTSF1Q8WW33 167 aa12.03□□□□□ -0.48
USH1C-207ENST00000527720 AJUBAQ96IF1 538 aa12.03□□□□□ -0.48
USH1C-207ENST00000527720 OVOL3O00110 214 aa12.03□□□□□ -0.48
USH1C-207ENST00000527720 NDUFB8O95169 186 aa12.03□□□□□ -0.48
USH1C-207ENST00000527720 PSG3Q16557 428 aa12.03□□□□□ -0.48
USH1C-207ENST00000527720 C17orf77Q96MU5 243 aa12.03□□□□□ -0.48
USH1C-207ENST00000527720 ALKBH7Q9BT30 221 aaPredicted RBP12.03□□□□□ -0.48
USH1C-207ENST00000527720 AAMDCQ9H7C9 122 aa12.03□□□□□ -0.48
USH1C-207ENST00000527720 NRN1Q9NPD7 142 aa12.03□□□□□ -0.48
USH1C-207ENST00000527720 DIRC3C9JPN6 131 aa12.02□□□□□ -0.49
USH1C-207ENST00000527720 CAMPP49913 170 aa12.02□□□□□ -0.49
USH1C-207ENST00000527720 FOXA3P55318 350 aaPredicted RBP12.02□□□□□ -0.49
USH1C-207ENST00000527720 CIARTQ8N365 385 aaPredicted RBP12.02□□□□□ -0.49
USH1C-207ENST00000527720 FAM110DQ8TAY7 271 aaPredicted RBP12.02□□□□□ -0.49
USH1C-207ENST00000527720 BPESC1Q9GZL8 116 aa12.02□□□□□ -0.49
USH1C-207ENST00000527720 S4R3C0 116 aa12.02□□□□□ -0.49
USH1C-207ENST00000527720 PSG9Q00887 426 aa12.02□□□□□ -0.49
USH1C-207ENST00000527720 FAM162BQ5T6X4 162 aa12.02□□□□□ -0.49
USH1C-207ENST00000527720 FBXL7Q9UJT9 491 aa12.02□□□□□ -0.49
USH1C-207ENST00000527720 PSG8Q9UQ74 426 aa12.02□□□□□ -0.49
USH1C-207ENST00000527720 RPL7P18124 248 aaKnown RBP12.01□□□□□ -0.49
USH1C-207ENST00000527720 GNLYP22749 145 aa12.01□□□□□ -0.49
USH1C-207ENST00000527720 UQCRFS1P47985 274 aa12.01□□□□□ -0.49
USH1C-207ENST00000527720 C19orf84I3L1E1 186 aa12□□□□□ -0.49
USH1C-207ENST00000527720 CTSGP08311 255 aa12□□□□□ -0.49
USH1C-207ENST00000527720 SAA4P35542 130 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms