RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 MBD3L2Q8NHZ7 208 aaPredicted RBP10.04□□□□□ -0.8
CAPN1-208ENST00000527323 URB1-AS1Q96HZ7 61 aa10.04□□□□□ -0.8
CAPN1-208ENST00000527323 ARHGAP32A7KAX9 2087 aa10.04□□□□□ -0.8
CAPN1-208ENST00000527323 A0A1B0GXF2 115 aa10.03□□□□□ -0.8
CAPN1-208ENST00000527323 CSN3P07498 182 aa10.03□□□□□ -0.8
CAPN1-208ENST00000527323 ZNF138P52744 262 aa10.03□□□□□ -0.8
CAPN1-208ENST00000527323 C22orf15Q8WYQ4 148 aa10.03□□□□□ -0.8
CAPN1-208ENST00000527323 LINC00574Q9H8X3 128 aa10.03□□□□□ -0.8
CAPN1-208ENST00000527323 HELZ2Q9BYK8 2649 aaKnown RBP10.03□□□□□ -0.8
CAPN1-208ENST00000527323 CCDC168Q8NDH2 2452 aa10.03□□□□□ -0.8
CAPN1-208ENST00000527323 NAV3Q8IVL0 2385 aa10.03□□□□□ -0.8
CAPN1-208ENST00000527323 IGHV3-72A0A0B4J1Y9 119 aa10.03□□□□□ -0.8
CAPN1-208ENST00000527323 SYS1-DBNDD2H3BUS1 97 aa10.03□□□□□ -0.8
CAPN1-208ENST00000527323 TOMM40O96008 361 aa10.03□□□□□ -0.8
CAPN1-208ENST00000527323 TMEM191AQ9H0A3 160 aa10.03□□□□□ -0.8
CAPN1-208ENST00000527323 VMA21Q3ZAQ7 101 aa10.03□□□□□ -0.8
CAPN1-208ENST00000527323 GTSF1Q8WW33 167 aa10.03□□□□□ -0.8
CAPN1-208ENST00000527323 C7orf69Q9H7B7 122 aa10.03□□□□□ -0.8
CAPN1-208ENST00000527323 IGHV1-24A0A0C4DH33 117 aa10.02□□□□□ -0.81
CAPN1-208ENST00000527323 CGB1A6NKQ9 187 aa10.02□□□□□ -0.81
CAPN1-208ENST00000527323 COL8A1P27658 744 aa10.02□□□□□ -0.81
CAPN1-208ENST00000527323 TMEM200BQ69YZ2 307 aa10.02□□□□□ -0.81
CAPN1-208ENST00000527323 SLC25A34Q6PIV7 304 aa10.02□□□□□ -0.81
CAPN1-208ENST00000527323 ST20Q9HBF5 79 aa10.02□□□□□ -0.81
CAPN1-208ENST00000527323 CBY3A6NI87 242 aa10.02□□□□□ -0.81
CAPN1-208ENST00000527323 MYCNOSP40205 109 aa10.02□□□□□ -0.81
CAPN1-208ENST00000527323 THAP8Q8NA92 274 aa10.02□□□□□ -0.81
CAPN1-208ENST00000527323 C5orf17Q8NAS9 161 aa10.02□□□□□ -0.81
CAPN1-208ENST00000527323 Q9H3A6 140 aa10.02□□□□□ -0.81
CAPN1-208ENST00000527323 TPSG1Q9NRR2 321 aa10.02□□□□□ -0.81
CAPN1-208ENST00000527323 A0A1W2PPI3 338 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 C22orf46C9J442 243 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 ETFRF1Q6IPR1 90 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 RBPMS2Q6ZRY4 209 aaKnown RBP10.01□□□□□ -0.81
CAPN1-208ENST00000527323 CHCHD1Q96BP2 118 aaKnown RBP10.01□□□□□ -0.81
CAPN1-208ENST00000527323 PMCHL2Q9BQD1 86 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 MAP1LC3CQ9BXW4 147 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 DSCAML1Q8TD84 2053 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 TLN2Q9Y4G6 2542 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 TRAV8-1A0A0A6YYK1 113 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 FSTL3O95633 263 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 KLRB1Q12918 225 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 RUSC1-AS1Q66K80 236 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 OR4A5Q8NH83 315 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 FMC1Q96HJ9 113 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 GSX1Q9H4S2 264 aaPredicted RBP10.01□□□□□ -0.81
CAPN1-208ENST00000527323 RNF24Q9Y225 148 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 TCRAP04437 139 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 TNFRSF1AP19438 455 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 RBX1P62877 108 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 PRNTQ86SH4 94 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 CCL17Q92583 94 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 RITA1Q96K30 269 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 MLST8Q9BVC4 326 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 KLF12Q9Y4X4 402 aa10.01□□□□□ -0.81
CAPN1-208ENST00000527323 LOC105371242A0A075B767 164 aa10□□□□□ -0.81
CAPN1-208ENST00000527323 IGHV2-70DA0A0C4DH43 119 aa10□□□□□ -0.81
CAPN1-208ENST00000527323 INS-IGF2F8WCM5 200 aa10□□□□□ -0.81
CAPN1-208ENST00000527323 GNLYP22749 145 aa10□□□□□ -0.81
CAPN1-208ENST00000527323 HTR1DP28221 377 aa10□□□□□ -0.81
CAPN1-208ENST00000527323 MEF2CQ06413 473 aaPredicted RBP10□□□□□ -0.81
CAPN1-208ENST00000527323 CIARTQ8N365 385 aaPredicted RBP10□□□□□ -0.81
CAPN1-208ENST00000527323 TMEM186Q96B77 213 aa10□□□□□ -0.81
CAPN1-208ENST00000527323 TANC2Q9HCD6 1990 aa10□□□□□ -0.81
CAPN1-208ENST00000527323 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10□□□□□ -0.81
CAPN1-208ENST00000527323 LIPFP07098 398 aa10□□□□□ -0.81
CAPN1-208ENST00000527323 PRB4P10163 310 aaPredicted RBP10□□□□□ -0.81
CAPN1-208ENST00000527323 CD40P25942 277 aa10□□□□□ -0.81
CAPN1-208ENST00000527323 CEACAM8P31997 349 aaPredicted RBP10□□□□□ -0.81
CAPN1-208ENST00000527323 FAM120AOSQ5T036 256 aa10□□□□□ -0.81
CAPN1-208ENST00000527323 TEX36Q5VZQ5 186 aa10□□□□□ -0.81
CAPN1-208ENST00000527323 PRSS22Q9GZN4 317 aa10□□□□□ -0.81
CAPN1-208ENST00000527323 SOX21Q9Y651 276 aaPredicted RBP10□□□□□ -0.81
CAPN1-208ENST00000527323 ZANQ9Y493 2812 aa9.99□□□□□ -0.81
CAPN1-208ENST00000527323 UCNP55089 124 aa9.99□□□□□ -0.81
CAPN1-208ENST00000527323 LYZP61626 148 aa9.99□□□□□ -0.81
CAPN1-208ENST00000527323 LRRC10Q5BKY1 277 aa9.99□□□□□ -0.81
CAPN1-208ENST00000527323 BBC3Q96PG8 261 aaPredicted RBP9.99□□□□□ -0.81
CAPN1-208ENST00000527323 DYSFO75923 2080 aa9.99□□□□□ -0.81
CAPN1-208ENST00000527323 LOC102724200A0A096LPH7 203 aaPredicted RBP9.99□□□□□ -0.81
CAPN1-208ENST00000527323 NDUFB3O43676 98 aa9.99□□□□□ -0.81
CAPN1-208ENST00000527323 LY6HO94772 140 aa9.99□□□□□ -0.81
CAPN1-208ENST00000527323 SMIM12Q96EX1 92 aa9.99□□□□□ -0.81
CAPN1-208ENST00000527323 TPPP3Q9BW30 176 aa9.99□□□□□ -0.81
CAPN1-208ENST00000527323 MUC21A0A0G2JKD1 596 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 MUC21A0A140T8X8 626 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 LTAP01374 205 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 IGLV2-23P01705 113 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 MUC21Q5SSG8 566 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 GOLT1AQ6ZVE7 132 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 PPIAL4EA0A075B759 164 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 TRAV30A0A087WSZ9 112 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 C19orf71A6NCJ1 209 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 PPIAL4DF5H284 164 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 K7EP13 123 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 OR5AL1P0C617 328 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 PPIAL4FP0DN26 164 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 RPL27AP46776 148 aaKnown RBP9.98□□□□□ -0.81
CAPN1-208ENST00000527323 BSPH1Q075Z2 132 aa9.98□□□□□ -0.81
CAPN1-208ENST00000527323 TRGV9Q99603 122 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms