RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 MRAPQ8TCY5 172 aa15.5■□□□□ 0.07
CD44-222ENST00000526025 DCANP1Q8TF63 244 aa15.5■□□□□ 0.07
CD44-222ENST00000526025 PSMG3Q9BT73 122 aaPredicted RBP15.5■□□□□ 0.07
CD44-222ENST00000526025 RSG1Q9BU20 258 aa15.5■□□□□ 0.07
CD44-222ENST00000526025 SLC25A32Q9H2D1 315 aa15.5■□□□□ 0.07
CD44-222ENST00000526025 C19orf73Q9NVV2 129 aa15.5■□□□□ 0.07
CD44-222ENST00000526025 A0A1B0GVG6 124 aa15.49■□□□□ 0.07
CD44-222ENST00000526025 C1QBP02746 253 aa15.49■□□□□ 0.07
CD44-222ENST00000526025 MEOX2P50222 304 aa15.49■□□□□ 0.07
CD44-222ENST00000526025 SLC25A22Q9H936 323 aa15.49■□□□□ 0.07
CD44-222ENST00000526025 IGKV3-7A0A075B6H7 116 aa15.48■□□□□ 0.07
CD44-222ENST00000526025 JTBO76095 146 aa15.48■□□□□ 0.07
CD44-222ENST00000526025 ODF3L2Q3SX64 289 aa15.48■□□□□ 0.07
CD44-222ENST00000526025 GBGT1Q8N5D6 347 aa15.48■□□□□ 0.07
CD44-222ENST00000526025 OR2G3Q8NGZ4 309 aa15.48■□□□□ 0.07
CD44-222ENST00000526025 PRKDCP78527 4128 aaKnown RBP15.47■□□□□ 0.07
CD44-222ENST00000526025 LEMD1Q68G75 181 aa15.47■□□□□ 0.07
CD44-222ENST00000526025 RPL7L1Q6DKI1 246 aaKnown RBP15.47■□□□□ 0.07
CD44-222ENST00000526025 GNPNAT1Q96EK6 184 aaPredicted RBP15.47■□□□□ 0.07
CD44-222ENST00000526025 HYLS1Q96M11 299 aa15.47■□□□□ 0.07
CD44-222ENST00000526025 MRPL32Q9BYC8 188 aaKnown RBP15.47■□□□□ 0.07
CD44-222ENST00000526025 A0A087X0K7 114 aa15.46■□□□□ 0.07
CD44-222ENST00000526025 OR11H12B2RN74 326 aa15.46■□□□□ 0.07
CD44-222ENST00000526025 TFPI2P48307 235 aa15.46■□□□□ 0.07
CD44-222ENST00000526025 SERF2P84101 59 aa15.46■□□□□ 0.07
CD44-222ENST00000526025 FFAR4Q5NUL3 377 aa15.46■□□□□ 0.07
CD44-222ENST00000526025 BPIFA4PQ86YQ2 179 aa15.46■□□□□ 0.07
CD44-222ENST00000526025 ARPC5LQ9BPX5 153 aa15.46■□□□□ 0.07
CD44-222ENST00000526025 CYTL1Q9NRR1 136 aa15.46■□□□□ 0.07
CD44-222ENST00000526025 MRPS12O15235 138 aaKnown RBP15.45■□□□□ 0.06
CD44-222ENST00000526025 CXCL2P19875 107 aa15.45■□□□□ 0.06
CD44-222ENST00000526025 ATP6V0CP27449 155 aa15.45■□□□□ 0.06
CD44-222ENST00000526025 GCSAMLQ5JQS6 135 aa15.45■□□□□ 0.06
CD44-222ENST00000526025 HSD17B11Q8NBQ5 300 aa15.45■□□□□ 0.06
CD44-222ENST00000526025 MAP6D1Q9H9H5 199 aa15.45■□□□□ 0.06
CD44-222ENST00000526025 SOCS3O14543 225 aa15.44■□□□□ 0.06
CD44-222ENST00000526025 IGHV4-30-4P0DP06 118 aa15.44■□□□□ 0.06
CD44-222ENST00000526025 ATF4P18848 351 aaPredicted RBP15.44■□□□□ 0.06
CD44-222ENST00000526025 PSMB3P49720 205 aa15.44■□□□□ 0.06
CD44-222ENST00000526025 SNRPD3P62318 126 aaKnown RBP15.44■□□□□ 0.06
CD44-222ENST00000526025 ACOT6Q3I5F7 207 aaPredicted RBP15.44■□□□□ 0.06
CD44-222ENST00000526025 FAM78BQ5VT40 261 aa15.44■□□□□ 0.06
CD44-222ENST00000526025 MORN5Q5VZ52 161 aa15.44■□□□□ 0.06
CD44-222ENST00000526025 WFDC3Q8IUB2 231 aa15.44■□□□□ 0.06
CD44-222ENST00000526025 TMEM14CQ9P0S9 112 aa15.44■□□□□ 0.06
CD44-222ENST00000526025 KANTRA0A1W2PQU2 76 aa15.43■□□□□ 0.06
CD44-222ENST00000526025 ISLRO14498 428 aa15.43■□□□□ 0.06
CD44-222ENST00000526025 BCL2L11O43521 198 aa15.43■□□□□ 0.06
CD44-222ENST00000526025 M6PRP20645 277 aa15.43■□□□□ 0.06
CD44-222ENST00000526025 ID1P41134 155 aa15.43■□□□□ 0.06
CD44-222ENST00000526025 C17orf77Q96MU5 243 aa15.43■□□□□ 0.06
CD44-222ENST00000526025 FUT9Q9Y231 359 aa15.43■□□□□ 0.06
CD44-222ENST00000526025 MBP02144 154 aa15.42■□□□□ 0.06
CD44-222ENST00000526025 RHOBP62745 196 aa15.42■□□□□ 0.06
CD44-222ENST00000526025 DEFB121Q5J5C9 76 aa15.42■□□□□ 0.06
CD44-222ENST00000526025 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.42■□□□□ 0.06
CD44-222ENST00000526025 FAM24BQ8N5W8 94 aa15.42■□□□□ 0.06
CD44-222ENST00000526025 DEFB125Q8N687 156 aa15.42■□□□□ 0.06
CD44-222ENST00000526025 IGLC2P0DOY2 106 aa15.41■□□□□ 0.06
CD44-222ENST00000526025 EIF5AP63241 154 aaKnown RBP15.41■□□□□ 0.06
CD44-222ENST00000526025 GUK1Q16774 197 aa15.41■□□□□ 0.06
CD44-222ENST00000526025 TMUB2Q71RG4 321 aa15.41■□□□□ 0.06
CD44-222ENST00000526025 WFDC10AQ9H1F0 79 aa15.41■□□□□ 0.06
CD44-222ENST00000526025 HRH4Q9H3N8 390 aa15.41■□□□□ 0.06
CD44-222ENST00000526025 TUBA4BQ9H853 241 aa15.41■□□□□ 0.06
CD44-222ENST00000526025 SRD5A3Q9H8P0 318 aa15.41■□□□□ 0.06
CD44-222ENST00000526025 UBQLN2Q9UHD9 624 aa15.41■□□□□ 0.06
CD44-222ENST00000526025 TRAV5A0A0B4J249 113 aa15.4■□□□□ 0.06
CD44-222ENST00000526025 ZNF688P0C7X2 276 aa15.4■□□□□ 0.06
CD44-222ENST00000526025 LCN15Q6UWW0 184 aa15.4■□□□□ 0.06
CD44-222ENST00000526025 FAM167A-AS1Q96KT0 104 aa15.4■□□□□ 0.06
CD44-222ENST00000526025 B9D2Q9BPU9 175 aa15.4■□□□□ 0.06
CD44-222ENST00000526025 RFNGQ9Y644 331 aa15.4■□□□□ 0.06
CD44-222ENST00000526025 PFDN1O60925 122 aa15.39■□□□□ 0.05
CD44-222ENST00000526025 FRMD6-AS1P0C7T7 363 aa15.39■□□□□ 0.05
CD44-222ENST00000526025 TAS2R45P59539 299 aa15.39■□□□□ 0.05
CD44-222ENST00000526025 DEFB131AP59861 70 aa15.39■□□□□ 0.05
CD44-222ENST00000526025 CD300CQ08708 224 aa15.39■□□□□ 0.05
CD44-222ENST00000526025 ZFP69Q49AA0 526 aa15.39■□□□□ 0.05
CD44-222ENST00000526025 SPATA31B1PQ5VZV4 182 aa15.39■□□□□ 0.05
CD44-222ENST00000526025 LINC00322Q6ZN03 302 aaPredicted RBP15.39■□□□□ 0.05
CD44-222ENST00000526025 MIR17HGQ75NE6 70 aa15.39■□□□□ 0.05
CD44-222ENST00000526025 SLC50A1Q9BRV3 221 aa15.39■□□□□ 0.05
CD44-222ENST00000526025 SLC25A2Q9BXI2 301 aa15.39■□□□□ 0.05
CD44-222ENST00000526025 SH3BGRL3Q9H299 93 aa15.39■□□□□ 0.05
CD44-222ENST00000526025 ZNF253O75346 499 aa15.38■□□□□ 0.05
CD44-222ENST00000526025 HIST1H1EP10412 219 aaKnown RBP15.38■□□□□ 0.05
CD44-222ENST00000526025 SPP1P10451 314 aa15.38■□□□□ 0.05
CD44-222ENST00000526025 LGALSLQ3ZCW2 172 aaPredicted RBP15.38■□□□□ 0.05
CD44-222ENST00000526025 PSMG4Q5JS54 123 aa15.38■□□□□ 0.05
CD44-222ENST00000526025 C16orf92Q96LL3 132 aa15.38■□□□□ 0.05
CD44-222ENST00000526025 CITED4Q96RK1 184 aa15.38■□□□□ 0.05
CD44-222ENST00000526025 CLEC5AQ9NY25 188 aa15.38■□□□□ 0.05
CD44-222ENST00000526025 RAB2AP61019 212 aa15.37■□□□□ 0.05
CD44-222ENST00000526025 PDE6HQ13956 83 aa15.37■□□□□ 0.05
CD44-222ENST00000526025 KHDC3LQ587J8 217 aa15.37■□□□□ 0.05
CD44-222ENST00000526025 OR10G4Q8NGN3 311 aa15.37■□□□□ 0.05
CD44-222ENST00000526025 OR10G9Q8NGN4 311 aa15.37■□□□□ 0.05
CD44-222ENST00000526025 OR10G7Q8NGN6 311 aa15.37■□□□□ 0.05
CD44-222ENST00000526025 STOML3Q8TAV4 291 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms