RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 PXT1Q8NFP0 134 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 OR51D1Q8NGF3 324 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 PIGXQ8TBF5 258 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 TMEM254Q8TBM7 123 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 DNAJC9Q8WXX5 260 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 RAB8BQ92930 207 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 SLAMF6Q96DU3 332 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 PPP1R2P1Q96PQ5 205 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 TP53RKQ96S44 253 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 CCL19Q99731 98 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 C7orf50Q9BRJ6 194 aaKnown RBP-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 PRADC1Q9BSG0 188 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 UPF3BQ9BZI7 483 aaKnown RBP-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 PRTFDC1Q9NRG1 225 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 PCTPQ9UKL6 214 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 CYSLTR1Q9Y271 337 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 MYH6P13533 1939 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 ATRQ13535 2644 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 WNK3Q9BYP7 1800 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 NCAPD3P42695 1498 aa-0.29□□□□□ -2.46
CSDE1-210ENST00000525878 SETXQ7Z333 2677 aaKnown RBP-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 NF1P21359 2839 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 UBR4Q5T4S7 5183 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 BIVM-ERCC5R4GMW8 1640 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 FAM236DA0A1B0GTK5 79 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 A6NN06 94 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 ZNF727A8MUV8 499 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 F8W1H4 67 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 H0Y980 276 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 H3BRM9 83 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 CHP2O43745 196 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 SSNA1O43805 119 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 CALUO43852 315 aaPredicted RBP-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 TIMM17BO60830 172 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 SPINK1P00995 79 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 RBP1P09455 135 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 TPM1P09493 284 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 OCMP0CE72 109 aaPredicted RBP-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 FAM236CP0DP71 79 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 CXCL8P10145 99 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 COX7CP15954 63 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 PPIBP23284 216 aaKnown RBP-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 CASP1P29466 404 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 BLVRAP53004 296 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 DEFA1P59665 94 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 YPEL3P61236 119 aaPredicted RBP-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 RPL37AP61513 92 aaKnown RBP-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 ANGPT1Q15389 498 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 HIST3H3Q16695 136 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 SPATA45Q537H7 98 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 C1orf134Q5TEV5 83 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 C2orf82Q6UX34 121 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 TMEM14EPQ6UXP3 125 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 PATE2Q6UY27 113 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 C4orf22Q6V702 233 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 Q6ZQY7 126 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 PLEKHG7Q6ZR37 379 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 TRAPPC6BQ86SZ2 158 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 C20orf196Q8IYI0 205 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 SYCE1Q8N0S2 351 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 OR5AS1Q8N127 324 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 SLC30A7Q8NEW0 376 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 OR52L1Q8NGH7 329 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 OR10K1Q8NGX5 313 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 OR2T10Q8NGZ9 312 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 PPTC7Q8NI37 304 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 OR52E6Q96RD3 313 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 GPER1Q99527 375 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 HIST1H2BLQ99880 126 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 LINC00467Q9BRT7 94 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 LIMD2Q9BT23 127 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 DCUN1D5Q9BTE7 237 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 KIFC1Q9BW19 673 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 WFDC10AQ9H1F0 79 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 TMEM138Q9NPI0 162 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 MED29Q9NX70 200 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 CHMP5Q9NZZ3 219 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 PKIGQ9Y2B9 76 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 UTP11Q9Y3A2 253 aaKnown RBP-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 U3KQA8 63 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 NBEAL1Q6ZS30 2694 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 HYDINQ4G0P3 5121 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 CEP164Q9UPV0 1460 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 HERC1Q15751 4861 aa-0.3□□□□□ -2.46
CSDE1-210ENST00000525878 TSC2P49815 1807 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 PCF11O94913 1555 aaKnown RBP-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 TGP01266 2768 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 DNAH3Q8TD57 4116 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 ERICH2A1L162 156 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 OR4C46A6NHA9 309 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 A8MWV9 139 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 LRRN3E7EW58 273 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 PSMD12O00232 456 aaPredicted RBP-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 ERC2-IT1O76042 136 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 CNIH1O95406 144 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 IGHV3-33P01772 117 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 TTRP02766 147 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 CD3DP04234 171 aa-0.31□□□□□ -2.46
CSDE1-210ENST00000525878 ISG15P05161 165 aa-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 429.7 ms