RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 LYRM1O43325 122 aa8.37□□□□□ -1.07
HIF3A-209ENST00000525854 SCGB1D2O95969 90 aa8.37□□□□□ -1.07
HIF3A-209ENST00000525854 METTL15P1P0C7V9 234 aa8.37□□□□□ -1.07
HIF3A-209ENST00000525854 LINC00869P0C866 280 aa8.37□□□□□ -1.07
HIF3A-209ENST00000525854 RPL7P18124 248 aaKnown RBP8.37□□□□□ -1.07
HIF3A-209ENST00000525854 FXYD7P58549 80 aa8.37□□□□□ -1.07
HIF3A-209ENST00000525854 PLP1P60201 277 aa8.37□□□□□ -1.07
HIF3A-209ENST00000525854 C12orf74Q32Q52 190 aa8.37□□□□□ -1.07
HIF3A-209ENST00000525854 ZNF709Q8N972 641 aa8.37□□□□□ -1.07
HIF3A-209ENST00000525854 ZBTB8BQ8NAP8 495 aaPredicted RBP8.37□□□□□ -1.07
HIF3A-209ENST00000525854 SHANK2-AS3Q9BTD1 123 aa8.37□□□□□ -1.07
HIF3A-209ENST00000525854 RNF126Q9BV68 326 aa8.37□□□□□ -1.07
HIF3A-209ENST00000525854 C20orf85Q9H1P6 137 aa8.37□□□□□ -1.07
HIF3A-209ENST00000525854 NPVFQ9HCQ7 196 aa8.37□□□□□ -1.07
HIF3A-209ENST00000525854 DOK5Q9P104 306 aa8.37□□□□□ -1.07
HIF3A-209ENST00000525854 CELA1Q9UNI1 258 aa8.37□□□□□ -1.07
HIF3A-209ENST00000525854 RFNGQ9Y644 331 aa8.37□□□□□ -1.07
HIF3A-209ENST00000525854 IGHV4-4A0A075B6R2 117 aa8.36□□□□□ -1.07
HIF3A-209ENST00000525854 F6UB75 175 aa8.36□□□□□ -1.07
HIF3A-209ENST00000525854 H3BRN7 92 aa8.36□□□□□ -1.07
HIF3A-209ENST00000525854 K7EPK0 472 aa8.36□□□□□ -1.07
HIF3A-209ENST00000525854 OR5G3P0C626 314 aa8.36□□□□□ -1.07
HIF3A-209ENST00000525854 SPART-AS1P0CW21 52 aa8.36□□□□□ -1.07
HIF3A-209ENST00000525854 EMP1P54849 157 aa8.36□□□□□ -1.07
HIF3A-209ENST00000525854 RRAS2P62070 204 aaPredicted RBP8.36□□□□□ -1.07
HIF3A-209ENST00000525854 TEPPQ6URK8 271 aa8.36□□□□□ -1.07
HIF3A-209ENST00000525854 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.36□□□□□ -1.07
HIF3A-209ENST00000525854 C20orf173Q96LM9 149 aa8.36□□□□□ -1.07
HIF3A-209ENST00000525854 GGACTQ9BVM4 153 aa8.36□□□□□ -1.07
HIF3A-209ENST00000525854 SCRT1Q9BWW7 348 aa8.36□□□□□ -1.07
HIF3A-209ENST00000525854 SLC25A39Q9BZJ4 359 aaPredicted RBP8.36□□□□□ -1.07
HIF3A-209ENST00000525854 SLC35B3Q9H1N7 401 aa8.36□□□□□ -1.07
HIF3A-209ENST00000525854 PLA2G10O15496 165 aa8.35□□□□□ -1.07
HIF3A-209ENST00000525854 DUSP14O95147 198 aaKnown RBP8.35□□□□□ -1.07
HIF3A-209ENST00000525854 HBE1P02100 147 aa8.35□□□□□ -1.07
HIF3A-209ENST00000525854 MBPP02686 304 aaPredicted RBP8.35□□□□□ -1.07
HIF3A-209ENST00000525854 AMBPP02760 352 aa8.35□□□□□ -1.07
HIF3A-209ENST00000525854 TCRBP04435 133 aa8.35□□□□□ -1.07
HIF3A-209ENST00000525854 FGL1Q08830 312 aa8.35□□□□□ -1.07
HIF3A-209ENST00000525854 PXDC1Q5TGL8 231 aa8.35□□□□□ -1.07
HIF3A-209ENST00000525854 ZNF546Q86UE3 836 aa8.35□□□□□ -1.07
HIF3A-209ENST00000525854 RCL1Q9Y2P8 373 aaKnown RBP8.35□□□□□ -1.07
HIF3A-209ENST00000525854 C7orf66A4D0T2 115 aa8.34□□□□□ -1.07
HIF3A-209ENST00000525854 A8MTW9 85 aa8.34□□□□□ -1.07
HIF3A-209ENST00000525854 L7N2F9 121 aa8.34□□□□□ -1.07
HIF3A-209ENST00000525854 GOSR2O14653 212 aa8.34□□□□□ -1.07
HIF3A-209ENST00000525854 CCNKO75909 580 aa8.34□□□□□ -1.07
HIF3A-209ENST00000525854 VAMP2P63027 116 aa8.34□□□□□ -1.07
HIF3A-209ENST00000525854 GSG1LQ6UXU4 331 aa8.34□□□□□ -1.07
HIF3A-209ENST00000525854 ZNF767PQ75MW2 155 aa8.34□□□□□ -1.07
HIF3A-209ENST00000525854 LRRC20Q8TCA0 184 aa8.34□□□□□ -1.07
HIF3A-209ENST00000525854 IGF2BP2-AS1Q96M15 143 aa8.34□□□□□ -1.07
HIF3A-209ENST00000525854 C17orf77Q96MU5 243 aa8.34□□□□□ -1.07
HIF3A-209ENST00000525854 TMEM208Q9BTX3 173 aa8.34□□□□□ -1.07
HIF3A-209ENST00000525854 CCDC32Q9BV29 185 aa8.34□□□□□ -1.07
HIF3A-209ENST00000525854 ARL6Q9H0F7 186 aa8.34□□□□□ -1.07
HIF3A-209ENST00000525854 TRAV6A0A075B6T7 132 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 TRAV8-2A0A0B4J237 113 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 FAM25EA8MYX2 175 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 CNN1P51911 297 aaKnown RBP8.33□□□□□ -1.08
HIF3A-209ENST00000525854 DEFA1P59665 94 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 DEFA3P59666 94 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 PRR20EP86478 221 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 PRR20CP86479 221 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 PRR20DP86480 221 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 PRR20BP86481 221 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 PRR20AP86496 221 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 SLC38A11Q08AI6 406 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 RAB31Q13636 194 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 RRN3P1Q2M238 152 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 AMTNQ6UX39 209 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 C1orf158Q8N1D5 194 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 RNF182Q8N6D2 247 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 ZNF738Q8NE65 137 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 ZNF431Q8TF32 576 aaPredicted RBP8.33□□□□□ -1.08
HIF3A-209ENST00000525854 UHRF2Q96PU4 802 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 NDUFAF3Q9BU61 184 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 ARV1Q9H2C2 271 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 NUDT15Q9NV35 164 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 DKK2Q9UBU2 259 aa8.33□□□□□ -1.08
HIF3A-209ENST00000525854 KMT2AQ03164 3969 aa8.32□□□□□ -1.08
HIF3A-209ENST00000525854 A0A087X0K7 114 aa8.32□□□□□ -1.08
HIF3A-209ENST00000525854 LOC102723971A0A1B0GUV8 181 aa8.32□□□□□ -1.08
HIF3A-209ENST00000525854 C5orf51A6NDU8 294 aa8.32□□□□□ -1.08
HIF3A-209ENST00000525854 CCSO14618 274 aa8.32□□□□□ -1.08
HIF3A-209ENST00000525854 AGPAT2O15120 278 aa8.32□□□□□ -1.08
HIF3A-209ENST00000525854 INSP01308 110 aa8.32□□□□□ -1.08
HIF3A-209ENST00000525854 P0DMU3 169 aa8.32□□□□□ -1.08
HIF3A-209ENST00000525854 FAM231AP0DMU4 169 aa8.32□□□□□ -1.08
HIF3A-209ENST00000525854 FAM231CP0DMU5 169 aa8.32□□□□□ -1.08
HIF3A-209ENST00000525854 PVALBP20472 110 aaPredicted RBP8.32□□□□□ -1.08
HIF3A-209ENST00000525854 BCAP31P51572 246 aa8.32□□□□□ -1.08
HIF3A-209ENST00000525854 B2MP61769 119 aa8.32□□□□□ -1.08
HIF3A-209ENST00000525854 FAM222AQ5U5X8 452 aa8.32□□□□□ -1.08
HIF3A-209ENST00000525854 IGFL4Q6B9Z1 124 aa8.32□□□□□ -1.08
HIF3A-209ENST00000525854 C12orf45Q8N5I9 185 aaPredicted RBP8.32□□□□□ -1.08
HIF3A-209ENST00000525854 OR11H7Q8NGC8 314 aa8.32□□□□□ -1.08
HIF3A-209ENST00000525854 FAM210BQ96KR6 192 aa8.32□□□□□ -1.08
HIF3A-209ENST00000525854 NIPSNAP3BQ9BS92 247 aa8.32□□□□□ -1.08
HIF3A-209ENST00000525854 LSM5Q9Y4Y9 91 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms