RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 FAM25EA8MYX2 175 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 H3BUA1 57 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 SSNA1O43805 119 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 DEDDO75618 318 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 SNAPC5O75971 98 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 BRI3O95415 125 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 MPC2O95563 127 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 MT-CO2P00403 227 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 CDX1P47902 265 aaPredicted RBP2.18□□□□□ -2.06
CSDE1-208ENST00000524652 TPPP2P59282 170 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 SLC35B1P78383 322 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 TMEM267Q0VDI3 215 aaPredicted RBP2.18□□□□□ -2.06
CSDE1-208ENST00000524652 EXOSC2Q13868 293 aaKnown RBP2.18□□□□□ -2.06
CSDE1-208ENST00000524652 LRRC37A5PQ49AS3 106 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 C2orf83Q53S99 150 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 SLC25A24Q6NUK1 477 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 TEX38Q6PEX7 206 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 TMEM14EPQ6UXP3 125 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 C12orf54Q6X4T0 127 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 ADAMTSL5Q6ZMM2 481 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 TMEM182Q6ZP80 229 aaPredicted RBP2.18□□□□□ -2.06
CSDE1-208ENST00000524652 KLHL30-AS1Q8NEE0 82 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 OR11H4Q8NGC9 324 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 OR1P1Q8NH06 330 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 ZNF502Q8TBZ5 544 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 PPP1R1CQ8WVI7 109 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 C4orf3Q8WVX3 66 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 PINX1Q96BK5 328 aaKnown RBP2.18□□□□□ -2.06
CSDE1-208ENST00000524652 UBE2E2Q96LR5 201 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 C2orf50Q96LR7 162 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 SRSF8Q9BRL6 282 aaKnown RBP2.18□□□□□ -2.06
CSDE1-208ENST00000524652 CHRDL1Q9BU40 450 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 NMES1Q9C002 83 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 HRH4Q9H3N8 390 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 PLEKHA3Q9HB20 300 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 GPN1Q9HCN4 374 aaPredicted RBP2.18□□□□□ -2.06
CSDE1-208ENST00000524652 ZNF355PQ9NSJ1 428 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 FKBP11Q9NYL4 201 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 GSKIPQ9P0R6 139 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 LSM5Q9Y4Y9 91 aaKnown RBP2.18□□□□□ -2.06
CSDE1-208ENST00000524652 TSSC4Q9Y5U2 329 aaPredicted RBP2.18□□□□□ -2.06
CSDE1-208ENST00000524652 RFNGQ9Y644 331 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 SELENOKQ9Y6D0 94 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 DNAH10Q8IVF4 4471 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 DNAH2Q9P225 4427 aa2.18□□□□□ -2.06
CSDE1-208ENST00000524652 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.17□□□□□ -2.06
CSDE1-208ENST00000524652 IGHV3-35A0A0C4DH35 117 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 RNF222A6NCQ9 220 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 OR2T8A6NH00 312 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 FAM223BA6NKX1 122 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 RTL8CO15255 209 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 TGOLN2O43493 480 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 CST7O76096 145 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 ATG12O94817 140 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 IFNA10P01566 189 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 IFNA21P01568 189 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 CTSGP08311 255 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 LGALS1P09382 135 aaKnown RBP2.17□□□□□ -2.06
CSDE1-208ENST00000524652 METTL15P1P0C7V9 234 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 IGLC1P0CG04 106 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 DEFA4P12838 97 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 NPY1RP25929 384 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 GPR183P32249 361 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 HTR2BP41595 481 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 S100A10P60903 97 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 ERHP84090 104 aaKnown RBP2.17□□□□□ -2.06
CSDE1-208ENST00000524652 RUNX1Q01196 453 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 ZNF90Q03938 601 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 GAMTQ14353 236 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 SPANXN5Q5MJ07 72 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 THOC7Q6I9Y2 204 aaKnown RBP2.17□□□□□ -2.06
CSDE1-208ENST00000524652 PRSS54Q6PEW0 395 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 CLEC19AQ6UXS0 136 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 UNQ9165/PRO28630Q6UXU0 137 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 IL34Q6ZMJ4 242 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 KRTAP5-5Q701N2 237 aaPredicted RBP2.17□□□□□ -2.06
CSDE1-208ENST00000524652 HSD17B13Q7Z5P4 300 aaPredicted RBP2.17□□□□□ -2.06
CSDE1-208ENST00000524652 NDUFA11Q86Y39 141 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 FAM223AQ8IWN6 122 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 COMMD1Q8N668 190 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 TMEM252Q8N6L7 170 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 C3orf56Q8N813 242 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 OR11H1Q8NG94 326 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 OR4X2Q8NGF9 303 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 CACNG8Q8WXS5 425 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 DCUN1D4Q92564 292 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 DLX4Q92988 240 aaPredicted RBP2.17□□□□□ -2.06
CSDE1-208ENST00000524652 SMIM8Q96KF7 97 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 PDCD10Q9BUL8 212 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 GON7Q9BXV9 100 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 ZNF436Q9C0F3 470 aaPredicted RBP2.17□□□□□ -2.06
CSDE1-208ENST00000524652 MED28Q9H204 178 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 WFDC1Q9HC57 220 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 LYRM2Q9NU23 88 aaPredicted RBP2.17□□□□□ -2.06
CSDE1-208ENST00000524652 PSENENQ9NZ42 101 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 MBD2Q9UBB5 411 aa2.17□□□□□ -2.06
CSDE1-208ENST00000524652 IGHV3OR16-8A0A075B7F1 116 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 IZUMO1RA6ND01 250 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 LINC01619G3V211 115 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 G3V4G9 280 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms