RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	ALKBH7	Q9BT30	221 aa	Predicted RBP	6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	FAM103A1	Q9BTL3	118 aa	Known RBP	6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	CHRDL1	Q9BU40	450 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	CLEC7A	Q9BXN2	247 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	ZNF430	Q9H8G1	570 aa	Predicted RBP	6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	DNAJC4	Q9NNZ3	241 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	ZNF492	Q9P255	531 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	RNF7	Q9UBF6	113 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	LAMTOR2	Q9Y2Q5	125 aa		6.24	□□□□□ -1.41
SPIDR-223	ENST00000524033	TLN2	Q9Y4G6	2542 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	TRAV9-2	A0A087WT02	112 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033		A0A1W2PN81	502 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	VWC2L	B2RUY7	222 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033		H0YJW9	148 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	LY6H	O94772	140 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	IGKV1-16	P04430	117 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	CRYGC	P07315	174 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	SLC25A16	P16260	332 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	TSPO	P30536	169 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	KLF3	P57682	345 aa	Predicted RBP	6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	SLC35B1	P78383	322 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	LOXL1	Q08397	574 aa	Predicted RBP	6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	MMD	Q15546	238 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	TNXA	Q16473	311 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	CT83	Q5H943	113 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	FAM201A	Q5SY85	155 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	CYB5R2	Q6BCY4	276 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	EBLN2	Q6P2I7	272 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	C16orf54	Q6UWD8	224 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	SPATA12	Q7Z6I5	190 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	LINC00311	Q8N616	119 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	KLHDC1	Q8N7A1	406 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	NUP35	Q8NFH5	326 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	NUDT10	Q8NFP7	164 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	OR4F17	Q8NGA8	305 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	OR5AN1	Q8NGI8	311 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	OR1L4	Q8NGR5	311 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	C10orf105	Q8TEF2	133 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	NUDT11	Q96G61	164 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	MLST8	Q9BVC4	326 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	MRPL20	Q9BYC9	149 aa	Known RBP	6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	FNDC4	Q9H6D8	234 aa	Predicted RBP	6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	SAP30L	Q9HAJ7	183 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	ZNF331	Q9NQX6	463 aa	Predicted RBP	6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	TNFRSF19	Q9NS68	423 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	ZNF355P	Q9NSJ1	428 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	KLF12	Q9Y4X4	402 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	LINC00312	Q9Y6C7	94 aa		6.23	□□□□□ -1.41
SPIDR-223	ENST00000524033	TRAV5	A0A0B4J249	113 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	IGHV1-69-2	A0A0G2JMI3	117 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	TCRBV4S1A1T	A0A5B7	111 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	IGLC7	A0M8Q6	106 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	C19orf71	A6NCJ1	209 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	VSTM5	A8MXK1	200 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	SPINK4	O60575	86 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	FCN3	O75636	299 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	IGLV2-23	P01705	113 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	IGHV1-46	P01743	117 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	MGST1	P10620	155 aa	Known RBP	6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	GNG10	P50151	68 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	ZNF137P	P52743	207 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	MRGPRG-AS1	Q2M3A8	158 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033		Q6ZN92	141 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	FAM19A2	Q8N3H0	131 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	C8orf31	Q8N9H6	132 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	GATD1	Q8NB37	220 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	OR10W1	Q8NGF6	305 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	PAXX	Q9BUH6	204 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	SSBP3	Q9BWW4	388 aa	Predicted RBP	6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	HINT2	Q9BX68	163 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	PRSS22	Q9GZN4	317 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	CBY1	Q9Y3M2	126 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	PPIAL4A	Q9Y536	164 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	SOX21	Q9Y651	276 aa	Predicted RBP	6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	ROS1	P08922	2347 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033	CSPG4	Q6UVK1	2322 aa		6.22	□□□□□ -1.41
SPIDR-223	ENST00000524033		A0A096LNT2	108 aa		6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033	TRBV6-1	A0A0K0K1D8	114 aa		6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033		B9A039	149 aa		6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033		E7EUB6	86 aa		6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033	NPIPB6	E9PJ23	425 aa		6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033		K7EP13	123 aa		6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033	NDUFS8	O00217	210 aa		6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033	CRX	O43186	299 aa	Predicted RBP	6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033	SPRY3	O43610	288 aa		6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033	CA1	P00915	261 aa	Predicted RBP	6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033	APOA2	P02652	100 aa		6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033	PYY	P10082	97 aa		6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033	REG1B	P48304	166 aa		6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033	MFAP2	P55001	183 aa		6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033	BPIFB3	P59826	476 aa		6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033	PLP1	P60201	277 aa		6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033	UBE2G1	P62253	170 aa		6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033	RPL8	P62917	257 aa	Known RBP	6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033	MEF2C	Q06413	473 aa	Predicted RBP	6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033	ADIPOQ	Q15848	244 aa		6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033	BATF	Q16520	125 aa		6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033	FAM162B	Q5T6X4	162 aa		6.21	□□□□□ -1.42
SPIDR-223	ENST00000524033	LCN12	Q6JVE5	192 aa		6.21	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms