RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 OXA1LQ15070 435 aa13.32□□□□□ -0.28
PTP4A3-206ENST00000524028 RRN3P1Q2M238 152 aa13.32□□□□□ -0.28
PTP4A3-206ENST00000524028 LGALS9BQ3B8N2 356 aa13.32□□□□□ -0.28
PTP4A3-206ENST00000524028 RNF182Q8N6D2 247 aa13.32□□□□□ -0.28
PTP4A3-206ENST00000524028 DEDD2Q8WXF8 326 aa13.32□□□□□ -0.28
PTP4A3-206ENST00000524028 IGF2BP2-AS1Q96M15 143 aa13.32□□□□□ -0.28
PTP4A3-206ENST00000524028 TMEM147Q9BVK8 224 aa13.32□□□□□ -0.28
PTP4A3-206ENST00000524028 STRAPQ9Y3F4 350 aaKnown RBP13.32□□□□□ -0.28
PTP4A3-206ENST00000524028 CRXO43186 299 aaPredicted RBP13.31□□□□□ -0.28
PTP4A3-206ENST00000524028 IFNA21P01568 189 aa13.31□□□□□ -0.28
PTP4A3-206ENST00000524028 CNN1P51911 297 aaKnown RBP13.31□□□□□ -0.28
PTP4A3-206ENST00000524028 POLR2GP62487 172 aaKnown RBP eCLIP13.31□□□□□ -0.28
PTP4A3-206ENST00000524028 TMEM144Q7Z5S9 345 aa13.31□□□□□ -0.28
PTP4A3-206ENST00000524028 PKHD1P08F94 4074 aa13.31□□□□□ -0.28
PTP4A3-206ENST00000524028 IGLV2-18A0A075B6J9 118 aa13.3□□□□□ -0.28
PTP4A3-206ENST00000524028 C9orf170A2RU37 121 aa13.3□□□□□ -0.28
PTP4A3-206ENST00000524028 PMS2P5A8MQ11 134 aa13.3□□□□□ -0.28
PTP4A3-206ENST00000524028 H3BRN7 92 aa13.3□□□□□ -0.28
PTP4A3-206ENST00000524028 M0R2Z0 102 aa13.3□□□□□ -0.28
PTP4A3-206ENST00000524028 Q6ZR54 194 aa13.3□□□□□ -0.28
PTP4A3-206ENST00000524028 OR11H7Q8NGC8 314 aa13.3□□□□□ -0.28
PTP4A3-206ENST00000524028 GPR82Q96P67 336 aa13.3□□□□□ -0.28
PTP4A3-206ENST00000524028 SLC25A39Q9BZJ4 359 aaPredicted RBP13.3□□□□□ -0.28
PTP4A3-206ENST00000524028 ZNF705GA8MUZ8 300 aaPredicted RBP13.29□□□□□ -0.28
PTP4A3-206ENST00000524028 S100A5P33763 92 aa13.29□□□□□ -0.28
PTP4A3-206ENST00000524028 SPINK13Q1W4C9 94 aa13.29□□□□□ -0.28
PTP4A3-206ENST00000524028 TMEM88Q6PEY1 159 aa13.29□□□□□ -0.28
PTP4A3-206ENST00000524028 CYP2G1PQ6ZSU1 146 aa13.29□□□□□ -0.28
PTP4A3-206ENST00000524028 UBE2DNLQ8IWF7 75 aa13.29□□□□□ -0.28
PTP4A3-206ENST00000524028 SHANK2-AS3Q9BTD1 123 aa13.29□□□□□ -0.28
PTP4A3-206ENST00000524028 TMEM208Q9BTX3 173 aa13.29□□□□□ -0.28
PTP4A3-206ENST00000524028 SRRQ9GZT4 340 aa13.29□□□□□ -0.28
PTP4A3-206ENST00000524028 PSENENQ9NZ42 101 aa13.29□□□□□ -0.28
PTP4A3-206ENST00000524028 FLVCR2Q9UPI3 526 aa13.29□□□□□ -0.28
PTP4A3-206ENST00000524028 SMCO3A2RU48 225 aa13.28□□□□□ -0.28
PTP4A3-206ENST00000524028 CCNKO75909 580 aa13.28□□□□□ -0.28
PTP4A3-206ENST00000524028 IL5P05113 134 aa13.28□□□□□ -0.28
PTP4A3-206ENST00000524028 UBE2MP61081 183 aaKnown RBP13.28□□□□□ -0.28
PTP4A3-206ENST00000524028 DAD1P61803 113 aa13.28□□□□□ -0.28
PTP4A3-206ENST00000524028 FGL1Q08830 312 aa13.28□□□□□ -0.28
PTP4A3-206ENST00000524028 PKD1P98161 4303 aa13.27□□□□□ -0.28
PTP4A3-206ENST00000524028 NDUFB6O95139 128 aa13.27□□□□□ -0.29
PTP4A3-206ENST00000524028 DUSP14O95147 198 aaKnown RBP13.27□□□□□ -0.29
PTP4A3-206ENST00000524028 BAK1Q16611 211 aa13.27□□□□□ -0.29
PTP4A3-206ENST00000524028 BAP18Q8IXM2 172 aa13.27□□□□□ -0.29
PTP4A3-206ENST00000524028 HIGD1AQ9Y241 93 aa13.27□□□□□ -0.29
PTP4A3-206ENST00000524028 TRAV12-2A0A075B6T6 113 aa13.26□□□□□ -0.29
PTP4A3-206ENST00000524028 CCDC160A6NGH7 325 aa13.26□□□□□ -0.29
PTP4A3-206ENST00000524028 SSSCA1O60232 199 aa13.26□□□□□ -0.29
PTP4A3-206ENST00000524028 LINC00869P0C866 280 aa13.26□□□□□ -0.29
PTP4A3-206ENST00000524028 PRB4P10163 310 aaPredicted RBP13.26□□□□□ -0.29
PTP4A3-206ENST00000524028 AZU1P20160 251 aa13.26□□□□□ -0.29
PTP4A3-206ENST00000524028 PLP1P60201 277 aa13.26□□□□□ -0.29
PTP4A3-206ENST00000524028 DYNC1H1Q14204 4646 aaKnown RBP13.26□□□□□ -0.29
PTP4A3-206ENST00000524028 RNF212Q495C1 297 aa13.26□□□□□ -0.29
PTP4A3-206ENST00000524028 DNAH11Q96DT5 4516 aa13.26□□□□□ -0.29
PTP4A3-206ENST00000524028 SMIM8Q96KF7 97 aa13.26□□□□□ -0.29
PTP4A3-206ENST00000524028 UHRF2Q96PU4 802 aa13.26□□□□□ -0.29
PTP4A3-206ENST00000524028 RBM38Q9H0Z9 239 aaKnown RBP13.26□□□□□ -0.29
PTP4A3-206ENST00000524028 PLAC8L1A1L4L8 177 aa13.25□□□□□ -0.29
PTP4A3-206ENST00000524028 HYPMO75409 117 aa13.25□□□□□ -0.29
PTP4A3-206ENST00000524028 INSP01308 110 aa13.25□□□□□ -0.29
PTP4A3-206ENST00000524028 S100A7P31151 101 aa13.25□□□□□ -0.29
PTP4A3-206ENST00000524028 RAP2BP61225 183 aa13.25□□□□□ -0.29
PTP4A3-206ENST00000524028 RRAS2P62070 204 aaPredicted RBP13.25□□□□□ -0.29
PTP4A3-206ENST00000524028 PATE2Q6UY27 113 aa13.25□□□□□ -0.29
PTP4A3-206ENST00000524028 ZNF738Q8NE65 137 aa13.25□□□□□ -0.29
PTP4A3-206ENST00000524028 OR5G3P0C626 314 aa13.24□□□□□ -0.29
PTP4A3-206ENST00000524028 OR4E1P0C645 316 aa13.24□□□□□ -0.29
PTP4A3-206ENST00000524028 RPL7P18124 248 aaKnown RBP13.24□□□□□ -0.29
PTP4A3-206ENST00000524028 CXCL3P19876 107 aa13.24□□□□□ -0.29
PTP4A3-206ENST00000524028 DLK1P80370 383 aa13.24□□□□□ -0.29
PTP4A3-206ENST00000524028 FCN2Q15485 313 aa13.24□□□□□ -0.29
PTP4A3-206ENST00000524028 TMEM14EPQ6UXP3 125 aa13.24□□□□□ -0.29
PTP4A3-206ENST00000524028 A0A087X0K7 114 aa13.23□□□□□ -0.29
PTP4A3-206ENST00000524028 NAP1L6A6NFF2 107 aa13.23□□□□□ -0.29
PTP4A3-206ENST00000524028 LYRM9A8MSI8 78 aa13.23□□□□□ -0.29
PTP4A3-206ENST00000524028 BOLA2-SMG1P6H3BVE0 249 aa13.23□□□□□ -0.29
PTP4A3-206ENST00000524028 METTL15P1P0C7V9 234 aa13.23□□□□□ -0.29
PTP4A3-206ENST00000524028 MED14OSP0DP75 135 aa13.23□□□□□ -0.29
PTP4A3-206ENST00000524028 ANXA7P20073 488 aaKnown RBP13.23□□□□□ -0.29
PTP4A3-206ENST00000524028 SELENOTP62341 195 aa13.23□□□□□ -0.29
PTP4A3-206ENST00000524028 HIST1H1AQ02539 215 aaPredicted RBP13.23□□□□□ -0.29
PTP4A3-206ENST00000524028 SPANXN2Q5MJ10 180 aa13.23□□□□□ -0.29
PTP4A3-206ENST00000524028 OR8A1Q8NGG7 326 aa13.23□□□□□ -0.29
PTP4A3-206ENST00000524028 SDHCQ99643 169 aaPredicted RBP13.23□□□□□ -0.29
PTP4A3-206ENST00000524028 LINC00854A0A1B0GVQ3 168 aa13.22□□□□□ -0.29
PTP4A3-206ENST00000524028 MRPS12O15235 138 aaKnown RBP13.22□□□□□ -0.29
PTP4A3-206ENST00000524028 DEFB130BP0DP73 79 aa13.22□□□□□ -0.29
PTP4A3-206ENST00000524028 DEFB130AP0DP74 79 aa13.22□□□□□ -0.29
PTP4A3-206ENST00000524028 TSPOP30536 169 aa13.22□□□□□ -0.29
PTP4A3-206ENST00000524028 BTCP35070 178 aa13.22□□□□□ -0.29
PTP4A3-206ENST00000524028 ARL6Q9H0F7 186 aa13.22□□□□□ -0.29
PTP4A3-206ENST00000524028 NPVFQ9HCQ7 196 aa13.22□□□□□ -0.29
PTP4A3-206ENST00000524028 K7EPK0 472 aa13.21□□□□□ -0.29
PTP4A3-206ENST00000524028 SCGB1D2O95969 90 aa13.21□□□□□ -0.29
PTP4A3-206ENST00000524028 INPP1P49441 399 aa13.21□□□□□ -0.29
PTP4A3-206ENST00000524028 B2MP61769 119 aa13.21□□□□□ -0.29
PTP4A3-206ENST00000524028 RHOBP62745 196 aa13.21□□□□□ -0.29
PTP4A3-206ENST00000524028 SLC38A11Q08AI6 406 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms