RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.69□□□□□ -0.7
TRAPPC9-213ENST00000522504 TMEM182Q6ZP80 229 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC9-213ENST00000522504 OR11H7Q8NGC8 314 aa10.69□□□□□ -0.7
TRAPPC9-213ENST00000522504 TRGV9Q99603 122 aa10.69□□□□□ -0.7
TRAPPC9-213ENST00000522504 RSG1Q9BU20 258 aa10.69□□□□□ -0.7
TRAPPC9-213ENST00000522504 CACFD1Q9UGQ2 172 aa10.69□□□□□ -0.7
TRAPPC9-213ENST00000522504 LINC00588Q9Y4M8 146 aa10.69□□□□□ -0.7
TRAPPC9-213ENST00000522504 TRAV8-2A0A0B4J237 113 aa10.68□□□□□ -0.7
TRAPPC9-213ENST00000522504 A0A0B4J2A0 478 aa10.68□□□□□ -0.7
TRAPPC9-213ENST00000522504 AKAIN1P0CW23 69 aa10.68□□□□□ -0.7
TRAPPC9-213ENST00000522504 BAP18Q8IXM2 172 aa10.68□□□□□ -0.7
TRAPPC9-213ENST00000522504 THAP8Q8NA92 274 aa10.68□□□□□ -0.7
TRAPPC9-213ENST00000522504 SLC25A22Q9H936 323 aa10.68□□□□□ -0.7
TRAPPC9-213ENST00000522504 SHPKQ9UHJ6 478 aa10.68□□□□□ -0.7
TRAPPC9-213ENST00000522504 ZNF98A6NK75 572 aa10.67□□□□□ -0.7
TRAPPC9-213ENST00000522504 LYRM9A8MSI8 78 aa10.67□□□□□ -0.7
TRAPPC9-213ENST00000522504 F5H768 121 aa10.67□□□□□ -0.7
TRAPPC9-213ENST00000522504 NUDT3O95989 172 aa10.67□□□□□ -0.7
TRAPPC9-213ENST00000522504 GATA2P23769 480 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC9-213ENST00000522504 TRIQKQ629K1 86 aa10.67□□□□□ -0.7
TRAPPC9-213ENST00000522504 RNF182Q8N6D2 247 aa10.67□□□□□ -0.7
TRAPPC9-213ENST00000522504 SDHCQ99643 169 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC9-213ENST00000522504 PRRT1Q99946 306 aa10.67□□□□□ -0.7
TRAPPC9-213ENST00000522504 KCNIP3Q9Y2W7 256 aa10.67□□□□□ -0.7
TRAPPC9-213ENST00000522504 TRAV12-2A0A075B6T6 113 aa10.66□□□□□ -0.7
TRAPPC9-213ENST00000522504 PITX3O75364 302 aa10.66□□□□□ -0.7
TRAPPC9-213ENST00000522504 INSP01308 110 aa10.66□□□□□ -0.7
TRAPPC9-213ENST00000522504 FABP1P07148 127 aa10.66□□□□□ -0.7
TRAPPC9-213ENST00000522504 PRB4P10163 310 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC9-213ENST00000522504 IAPPP10997 89 aa10.66□□□□□ -0.7
TRAPPC9-213ENST00000522504 AKR1C4P17516 323 aa10.66□□□□□ -0.7
TRAPPC9-213ENST00000522504 GALR1P47211 349 aa10.66□□□□□ -0.7
TRAPPC9-213ENST00000522504 INPP1P49441 399 aa10.66□□□□□ -0.7
TRAPPC9-213ENST00000522504 MEOX2P50222 304 aa10.66□□□□□ -0.7
TRAPPC9-213ENST00000522504 ATP5IP56385 69 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC9-213ENST00000522504 BAK1Q16611 211 aa10.66□□□□□ -0.7
TRAPPC9-213ENST00000522504 Q8N1X5 172 aa10.66□□□□□ -0.7
TRAPPC9-213ENST00000522504 OR1S1Q8NH92 325 aa10.66□□□□□ -0.7
TRAPPC9-213ENST00000522504 TRIM63Q969Q1 353 aa10.66□□□□□ -0.7
TRAPPC9-213ENST00000522504 CCDC32Q9BV29 185 aa10.66□□□□□ -0.7
TRAPPC9-213ENST00000522504 KRTAP1-5Q9BYS1 174 aa10.66□□□□□ -0.7
TRAPPC9-213ENST00000522504 PRSS46E5RG02 174 aa10.65□□□□□ -0.7
TRAPPC9-213ENST00000522504 IL7P13232 177 aa10.65□□□□□ -0.7
TRAPPC9-213ENST00000522504 TSPOP30536 169 aa10.65□□□□□ -0.7
TRAPPC9-213ENST00000522504 SAMD13Q5VXD3 122 aa10.65□□□□□ -0.7
TRAPPC9-213ENST00000522504 SPATA12Q7Z6I5 190 aa10.65□□□□□ -0.7
TRAPPC9-213ENST00000522504 TOMM5Q8N4H5 51 aa10.65□□□□□ -0.7
TRAPPC9-213ENST00000522504 RNF141Q8WVD5 230 aa10.65□□□□□ -0.7
TRAPPC9-213ENST00000522504 SLC25A39Q9BZJ4 359 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC9-213ENST00000522504 ANKRD20A5PA0PJZ0 165 aa10.64□□□□□ -0.71
TRAPPC9-213ENST00000522504 ORM2P19652 201 aa10.64□□□□□ -0.71
TRAPPC9-213ENST00000522504 KRTAP10-2P60368 255 aa10.64□□□□□ -0.71
TRAPPC9-213ENST00000522504 SCRT2Q9NQ03 307 aa10.64□□□□□ -0.71
TRAPPC9-213ENST00000522504 PAIP2BQ9ULR5 123 aaKnown RBP10.64□□□□□ -0.71
TRAPPC9-213ENST00000522504 DUSP14O95147 198 aaKnown RBP10.63□□□□□ -0.71
TRAPPC9-213ENST00000522504 AP3S2P59780 193 aa10.63□□□□□ -0.71
TRAPPC9-213ENST00000522504 GGNBP1Q5YKI7 109 aa10.63□□□□□ -0.71
TRAPPC9-213ENST00000522504 OR4D5Q8NGN0 318 aa10.63□□□□□ -0.71
TRAPPC9-213ENST00000522504 SLC45A2Q9UMX9 530 aa10.63□□□□□ -0.71
TRAPPC9-213ENST00000522504 MYCBP2O75592 4640 aa10.63□□□□□ -0.71
TRAPPC9-213ENST00000522504 LINC00854A0A1B0GVQ3 168 aa10.62□□□□□ -0.71
TRAPPC9-213ENST00000522504 CBY3A6NI87 242 aa10.62□□□□□ -0.71
TRAPPC9-213ENST00000522504 BOLA2-SMG1P6H3BVE0 249 aa10.62□□□□□ -0.71
TRAPPC9-213ENST00000522504 UPK1BO75841 260 aa10.62□□□□□ -0.71
TRAPPC9-213ENST00000522504 ATP5G1P05496 136 aa10.62□□□□□ -0.71
TRAPPC9-213ENST00000522504 ATP5G3P48201 142 aa10.62□□□□□ -0.71
TRAPPC9-213ENST00000522504 CCL18P55774 89 aa10.62□□□□□ -0.71
TRAPPC9-213ENST00000522504 RAB11AP62491 216 aa10.62□□□□□ -0.71
TRAPPC9-213ENST00000522504 SSX7Q7RTT5 188 aa10.62□□□□□ -0.71
TRAPPC9-213ENST00000522504 OR1B1Q8NGR6 318 aa10.62□□□□□ -0.71
TRAPPC9-213ENST00000522504 MCUBQ9NWR8 336 aa10.62□□□□□ -0.71
TRAPPC9-213ENST00000522504 CFDP00746 253 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC9-213ENST00000522504 FAUP35544 74 aaKnown RBP10.61□□□□□ -0.71
TRAPPC9-213ENST00000522504 FGL1Q08830 312 aa10.61□□□□□ -0.71
TRAPPC9-213ENST00000522504 ZNF738Q8NE65 137 aa10.61□□□□□ -0.71
TRAPPC9-213ENST00000522504 UHRF2Q96PU4 802 aa10.61□□□□□ -0.71
TRAPPC9-213ENST00000522504 LINC01587Q99440 93 aa10.61□□□□□ -0.71
TRAPPC9-213ENST00000522504 Q9H8V8 135 aa10.61□□□□□ -0.71
TRAPPC9-213ENST00000522504 SCP2D1Q9UJQ7 156 aa10.61□□□□□ -0.71
TRAPPC9-213ENST00000522504 H3BRN7 92 aa10.6□□□□□ -0.71
TRAPPC9-213ENST00000522504 HTN1P15515 57 aa10.6□□□□□ -0.71
TRAPPC9-213ENST00000522504 B2MP61769 119 aa10.6□□□□□ -0.71
TRAPPC9-213ENST00000522504 SRPXP78539 464 aa10.6□□□□□ -0.71
TRAPPC9-213ENST00000522504 HIST1H1AQ02539 215 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC9-213ENST00000522504 BPIFCQ8NFQ6 507 aa10.6□□□□□ -0.71
TRAPPC9-213ENST00000522504 SCGB3A2Q96PL1 93 aa10.6□□□□□ -0.71
TRAPPC9-213ENST00000522504 TMEM147Q9BVK8 224 aa10.6□□□□□ -0.71
TRAPPC9-213ENST00000522504 VPS13BQ7Z7G8 4022 aa10.59□□□□□ -0.71
TRAPPC9-213ENST00000522504 CENPXA8MT69 81 aa10.59□□□□□ -0.71
TRAPPC9-213ENST00000522504 WRBO00258 174 aa10.59□□□□□ -0.71
TRAPPC9-213ENST00000522504 ANXA3P12429 323 aa10.59□□□□□ -0.71
TRAPPC9-213ENST00000522504 CXCL3P19876 107 aa10.59□□□□□ -0.71
TRAPPC9-213ENST00000522504 TAS2R60P59551 318 aa10.59□□□□□ -0.71
TRAPPC9-213ENST00000522504 IFITM3Q01628 133 aa10.59□□□□□ -0.71
TRAPPC9-213ENST00000522504 CLINT1Q14677 625 aa10.59□□□□□ -0.71
TRAPPC9-213ENST00000522504 KIR3DS1Q14943 382 aa10.59□□□□□ -0.71
TRAPPC9-213ENST00000522504 OR8A1Q8NGG7 326 aa10.59□□□□□ -0.71
TRAPPC9-213ENST00000522504 GPR82Q96P67 336 aa10.59□□□□□ -0.71
TRAPPC9-213ENST00000522504 SHANK2-AS3Q9BTD1 123 aa10.59□□□□□ -0.71
TRAPPC9-213ENST00000522504 NOP10Q9NPE3 64 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms