RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 ZNF474Q6S9Z5 364 aaPredicted RBP11.24□□□□□ -0.61
SYNPO-205ENST00000522122 NUP37Q8NFH4 326 aa11.24□□□□□ -0.61
SYNPO-205ENST00000522122 ZNF418Q8TF45 676 aaPredicted RBP11.24□□□□□ -0.61
SYNPO-205ENST00000522122 GLMPQ8WWB7 406 aa11.24□□□□□ -0.61
SYNPO-205ENST00000522122 MRAP2Q96G30 205 aa11.24□□□□□ -0.61
SYNPO-205ENST00000522122 PYGO2Q9BRQ0 406 aa11.24□□□□□ -0.61
SYNPO-205ENST00000522122 FGF23Q9GZV9 251 aaPredicted RBP11.24□□□□□ -0.61
SYNPO-205ENST00000522122 MRPL27Q9P0M9 148 aaKnown RBP11.24□□□□□ -0.61
SYNPO-205ENST00000522122 SIGLEC9Q9Y336 463 aa11.24□□□□□ -0.61
SYNPO-205ENST00000522122 YLPM1P49750 1951 aaKnown RBP11.24□□□□□ -0.61
SYNPO-205ENST00000522122 YPEL3P61236 119 aaPredicted RBP11.24□□□□□ -0.61
SYNPO-205ENST00000522122 COA6Q5JTJ3 125 aaKnown RBP11.24□□□□□ -0.61
SYNPO-205ENST00000522122 MOB4Q9Y3A3 225 aa11.24□□□□□ -0.61
SYNPO-205ENST00000522122 HAX1O00165 279 aa11.24□□□□□ -0.61
SYNPO-205ENST00000522122 CD7P09564 240 aa11.24□□□□□ -0.61
SYNPO-205ENST00000522122 SEC11AP67812 179 aa11.24□□□□□ -0.61
SYNPO-205ENST00000522122 SNHG12Q9BXW3 62 aa11.24□□□□□ -0.61
SYNPO-205ENST00000522122 FNDC4Q9H6D8 234 aaPredicted RBP11.24□□□□□ -0.61
SYNPO-205ENST00000522122 IGKV2-40A0A087WW87 121 aaPredicted RBP11.23□□□□□ -0.61
SYNPO-205ENST00000522122 IGKV2D-40P01614 121 aaPredicted RBP11.23□□□□□ -0.61
SYNPO-205ENST00000522122 EVI2AP22794 236 aa11.23□□□□□ -0.61
SYNPO-205ENST00000522122 VWC2Q2TAL6 325 aa11.23□□□□□ -0.61
SYNPO-205ENST00000522122 ORMDL2Q53FV1 153 aa11.23□□□□□ -0.61
SYNPO-205ENST00000522122 SPACA3Q8IXA5 215 aa11.23□□□□□ -0.61
SYNPO-205ENST00000522122 IGKV3OR2-268A0A0C4DH90 116 aa11.23□□□□□ -0.61
SYNPO-205ENST00000522122 TTC32Q5I0X7 151 aa11.23□□□□□ -0.61
SYNPO-205ENST00000522122 KLF17Q5JT82 389 aaPredicted RBP11.23□□□□□ -0.61
SYNPO-205ENST00000522122 TPTE2P1Q5T6R2 138 aa11.23□□□□□ -0.61
SYNPO-205ENST00000522122 TRAV8-1A0A0A6YYK1 113 aa11.23□□□□□ -0.61
SYNPO-205ENST00000522122 PRR31Q5SQ13 230 aa11.23□□□□□ -0.61
SYNPO-205ENST00000522122 TMEM249Q2WGJ8 235 aa11.23□□□□□ -0.61
SYNPO-205ENST00000522122 C15orf32Q32M92 178 aa11.23□□□□□ -0.61
SYNPO-205ENST00000522122 DTX1Q86Y01 620 aa11.23□□□□□ -0.61
SYNPO-205ENST00000522122 DUX3Q96PT4 197 aa11.23□□□□□ -0.61
SYNPO-205ENST00000522122 PAX8Q06710 450 aa11.22□□□□□ -0.61
SYNPO-205ENST00000522122 OR2K2Q8NGT1 345 aa11.22□□□□□ -0.61
SYNPO-205ENST00000522122 CYSLTR1Q9Y271 337 aa11.22□□□□□ -0.61
SYNPO-205ENST00000522122 D6R8Y8 96 aa11.22□□□□□ -0.61
SYNPO-205ENST00000522122 RPL15P61313 204 aaKnown RBP11.22□□□□□ -0.61
SYNPO-205ENST00000522122 LYZL1Q6UWQ5 148 aa11.22□□□□□ -0.61
SYNPO-205ENST00000522122 Q6ZS92 163 aa11.22□□□□□ -0.61
SYNPO-205ENST00000522122 LINC00479Q96M42 142 aa11.22□□□□□ -0.61
SYNPO-205ENST00000522122 GTF3C1Q12789 2109 aa11.22□□□□□ -0.61
SYNPO-205ENST00000522122 OOSP1A8MZH6 123 aa11.22□□□□□ -0.61
SYNPO-205ENST00000522122 TGFAP01135 160 aa11.22□□□□□ -0.61
SYNPO-205ENST00000522122 IGKCP01834 107 aa11.22□□□□□ -0.61
SYNPO-205ENST00000522122 SRSF6Q13247 344 aaKnown RBP11.22□□□□□ -0.61
SYNPO-205ENST00000522122 C5orf64Q2M2E5 130 aa11.22□□□□□ -0.61
SYNPO-205ENST00000522122 PTPRSQ13332 1948 aa11.21□□□□□ -0.61
SYNPO-205ENST00000522122 A0A0G2JNJ9 132 aa11.21□□□□□ -0.61
SYNPO-205ENST00000522122 HSD52Q0P140 79 aa11.21□□□□□ -0.61
SYNPO-205ENST00000522122 Q9UFV3 132 aa11.21□□□□□ -0.61
SYNPO-205ENST00000522122 A0A1B0GUS0 222 aa11.21□□□□□ -0.62
SYNPO-205ENST00000522122 BUB1B-PAK6H3BSN5 160 aa11.21□□□□□ -0.62
SYNPO-205ENST00000522122 LYPD1Q8N2G4 141 aa11.21□□□□□ -0.62
SYNPO-205ENST00000522122 NCR2O95944 276 aa11.2□□□□□ -0.62
SYNPO-205ENST00000522122 VDAC2P45880 294 aaPredicted RBP11.2□□□□□ -0.62
SYNPO-205ENST00000522122 LDLRAD2Q5SZI1 272 aa11.2□□□□□ -0.62
SYNPO-205ENST00000522122 ITLN2Q8WWU7 325 aaPredicted RBP11.2□□□□□ -0.62
SYNPO-205ENST00000522122 TMEM14BQ9NUH8 114 aa11.2□□□□□ -0.62
SYNPO-205ENST00000522122 LINC00527Q9UJ94 153 aa11.2□□□□□ -0.62
SYNPO-205ENST00000522122 LINC01559Q495D7 138 aa11.2□□□□□ -0.62
SYNPO-205ENST00000522122 MTURNQ8N3F0 131 aa11.2□□□□□ -0.62
SYNPO-205ENST00000522122 OR9G4Q8NGQ1 327 aa11.2□□□□□ -0.62
SYNPO-205ENST00000522122 VCX2Q9H322 139 aa11.2□□□□□ -0.62
SYNPO-205ENST00000522122 SMPXQ9UHP9 88 aa11.2□□□□□ -0.62
SYNPO-205ENST00000522122 TOMM40O96008 361 aa11.2□□□□□ -0.62
SYNPO-205ENST00000522122 VMO1Q7Z5L0 202 aa11.2□□□□□ -0.62
SYNPO-205ENST00000522122 YPEL4Q96NS1 127 aa11.2□□□□□ -0.62
SYNPO-205ENST00000522122 SRCAPQ6ZRS2 3230 aa11.2□□□□□ -0.62
SYNPO-205ENST00000522122 OVOL1O14753 267 aa11.2□□□□□ -0.62
SYNPO-205ENST00000522122 DNAL4O96015 105 aa11.2□□□□□ -0.62
SYNPO-205ENST00000522122 KLRD1Q13241 179 aa11.2□□□□□ -0.62
SYNPO-205ENST00000522122 MINOS1Q5TGZ0 78 aa11.2□□□□□ -0.62
SYNPO-205ENST00000522122 LYPD2Q6UXB3 125 aa11.2□□□□□ -0.62
SYNPO-205ENST00000522122 JMJD8Q96S16 334 aa11.2□□□□□ -0.62
SYNPO-205ENST00000522122 MINOS1-NBL1R4GNA1 71 aa11.2□□□□□ -0.62
SYNPO-205ENST00000522122 MEGF9Q9H1U4 602 aa11.19□□□□□ -0.62
SYNPO-205ENST00000522122 SYS1-DBNDD2H3BUS1 97 aa11.19□□□□□ -0.62
SYNPO-205ENST00000522122 SIGLEC15Q6ZMC9 328 aa11.19□□□□□ -0.62
SYNPO-205ENST00000522122 Q6ZR03 302 aa11.19□□□□□ -0.62
SYNPO-205ENST00000522122 Q6ZWC4 215 aa11.19□□□□□ -0.62
SYNPO-205ENST00000522122 ZNF329Q86UD4 541 aa11.19□□□□□ -0.62
SYNPO-205ENST00000522122 DMRTC2Q8IXT2 367 aaPredicted RBP11.19□□□□□ -0.62
SYNPO-205ENST00000522122 RPRMLQ8N4K4 120 aa11.19□□□□□ -0.62
SYNPO-205ENST00000522122 NPFFR1Q9GZQ6 430 aa11.19□□□□□ -0.62
SYNPO-205ENST00000522122 H3BRM9 83 aa11.19□□□□□ -0.62
SYNPO-205ENST00000522122 IFI27P40305 119 aaPredicted RBP11.19□□□□□ -0.62
SYNPO-205ENST00000522122 MALRD1Q5VYJ5 2156 aa11.19□□□□□ -0.62
SYNPO-205ENST00000522122 ZNF114Q8NC26 417 aa11.19□□□□□ -0.62
SYNPO-205ENST00000522122 OR5A1Q8NGJ0 315 aa11.19□□□□□ -0.62
SYNPO-205ENST00000522122 hDV102S1A0JD36 115 aa11.19□□□□□ -0.62
SYNPO-205ENST00000522122 SCGB1A1P11684 91 aa11.19□□□□□ -0.62
SYNPO-205ENST00000522122 PSG3Q16557 428 aa11.19□□□□□ -0.62
SYNPO-205ENST00000522122 MRPS16Q9Y3D3 137 aaKnown RBP11.19□□□□□ -0.62
SYNPO-205ENST00000522122 TRAV41A0A0B4J266 112 aa11.18□□□□□ -0.62
SYNPO-205ENST00000522122 A0A1W2PPI3 338 aa11.18□□□□□ -0.62
SYNPO-205ENST00000522122 LINC01587Q99440 93 aa11.18□□□□□ -0.62
SYNPO-205ENST00000522122 CHTOPQ9Y3Y2 248 aaKnown RBP11.18□□□□□ -0.62
SYNPO-205ENST00000522122 TTC28Q96AY4 2481 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms