RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 KLF6Q99612 283 aaPredicted RBP2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 HIST1H2BNQ99877 126 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 HIST1H2BMQ99879 126 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 KIFC1Q9BW19 673 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 ARL5AQ9Y689 179 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 WNK1Q9H4A3 2382 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 GREB1Q4ZG55 1949 aa2.34□□□□□ -2.03
CTNNA1-233ENST00000522052 COL11A1P12107 1806 aaPredicted RBP2.34□□□□□ -2.03
CTNNA1-233ENST00000522052 EXOC1LA0A1B0GW35 172 aa2.34□□□□□ -2.03
CTNNA1-233ENST00000522052 GGT3PA6NGU5 568 aa2.34□□□□□ -2.03
CTNNA1-233ENST00000522052 H3BT86 120 aa2.34□□□□□ -2.03
CTNNA1-233ENST00000522052 RPL28P46779 137 aaKnown RBP2.34□□□□□ -2.03
CTNNA1-233ENST00000522052 EMP1P54849 157 aa2.34□□□□□ -2.03
CTNNA1-233ENST00000522052 RAB14P61106 215 aa2.34□□□□□ -2.03
CTNNA1-233ENST00000522052 RPL18Q07020 188 aaKnown RBP2.34□□□□□ -2.03
CTNNA1-233ENST00000522052 TAF1AQ15573 450 aaPredicted RBP2.34□□□□□ -2.03
CTNNA1-233ENST00000522052 ZNF705AQ6ZN79 300 aaPredicted RBP2.34□□□□□ -2.03
CTNNA1-233ENST00000522052 DYNAPQ8N1N2 210 aa2.34□□□□□ -2.03
CTNNA1-233ENST00000522052 GDPD1Q8N9F7 314 aa2.34□□□□□ -2.03
CTNNA1-233ENST00000522052 OR52L1Q8NGH7 329 aa2.34□□□□□ -2.03
CTNNA1-233ENST00000522052 OR13C4Q8NGS5 318 aa2.34□□□□□ -2.03
CTNNA1-233ENST00000522052 C20orf27Q9GZN8 174 aa2.34□□□□□ -2.03
CTNNA1-233ENST00000522052 RNASE7Q9H1E1 156 aaKnown RBP2.34□□□□□ -2.03
CTNNA1-233ENST00000522052 C11orf68Q9H3H3 251 aaKnown RBP2.34□□□□□ -2.03
CTNNA1-233ENST00000522052 TIMM22Q9Y584 194 aa2.34□□□□□ -2.03
CTNNA1-233ENST00000522052 TIMM9Q9Y5J7 89 aa2.34□□□□□ -2.03
CTNNA1-233ENST00000522052 ASCC3Q8N3C0 2202 aaKnown RBP2.34□□□□□ -2.04
CTNNA1-233ENST00000522052 NUP98P52948 1817 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 PATJQ8NI35 1801 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 VWFP04275 2813 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 PTPRFP10586 1907 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 IGKV1D-43A0A0B4J1Z2 117 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 TRAV41A0A0B4J266 112 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 TRGV4A0A0C4DH28 118 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 DPRXA6NFQ7 191 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 J3QRE1 110 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 PIRO00625 290 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 OR2B3O76000 313 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 IGKV1-5P01602 117 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 IGHV3-7P01780 117 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 MSMBP08118 114 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 HLA-EP13747 358 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 MSNP26038 577 aaKnown RBP2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 MAGEA12P43365 314 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 HINT1P49773 126 aaPredicted RBP2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 GLO1Q04760 184 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 C12orf74Q32Q52 190 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 IBA57Q5T440 356 aaKnown RBP2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 C9orf64Q5T6V5 341 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 AADACL3Q5VUY0 350 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 TEX36Q5VZQ5 186 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 RPL22L1Q6P5R6 122 aaKnown RBP2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 PXT1Q8NFP0 134 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 MCFD2Q8NI22 146 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 TOMM6Q96B49 74 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 CEP19Q96LK0 163 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 PHB2Q99623 299 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 DERL1Q9BUN8 251 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 UQCC1Q9NVA1 299 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 PRO2289Q9P1D8 64 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 NAT8Q9UHE5 227 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 TRPM6Q9BX84 2022 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 CUBNO60494 3623 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 MGAM2Q2M2H8 2515 aa2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 MUC22E2RYF6 1773 aaPredicted RBP2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 NYNRINQ9P2P1 1898 aaKnown RBP2.33□□□□□ -2.04
CTNNA1-233ENST00000522052 TENM1Q9UKZ4 2725 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 IGHV3-64A0A075B6Q5 118 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 TRAV9-1A0A075B6T8 112 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 TRAV7A0A075B6U4 112 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 IRGMA1A4Y4 181 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 FAM159BA6NKW6 160 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 FABP5P3A8MUU1 101 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 LY6LH3BQJ8 138 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 SERPINE1P05121 402 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 SULT1A3P0DMM9 295 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 SULT1A4P0DMN0 295 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 SMIM10L2AP0DMW4 78 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 SMIM10L2BP0DMW5 78 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 PPP1R2P41236 205 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 HACD4Q5VWC8 232 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 PPP1R2P3Q6NXS1 205 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 OR4X2Q8NGF9 303 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 CXCL16Q9H2A7 254 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 TP73-AS1Q9UF72 201 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 STOML2Q9UJZ1 356 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 SAMHD1Q9Y3Z3 626 aaKnown RBP2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 NSD1Q96L73 2696 aaPredicted RBP2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 SDK2Q58EX2 2172 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 SPAG17Q6Q759 2223 aa2.32□□□□□ -2.04
CTNNA1-233ENST00000522052 TRAV38-1A0A0B4J264 116 aa2.31□□□□□ -2.04
CTNNA1-233ENST00000522052 H7C2G1 150 aa2.31□□□□□ -2.04
CTNNA1-233ENST00000522052 ZNF682O95780 498 aa2.31□□□□□ -2.04
CTNNA1-233ENST00000522052 RBP1P09455 135 aa2.31□□□□□ -2.04
CTNNA1-233ENST00000522052 EVX1P49640 407 aa2.31□□□□□ -2.04
CTNNA1-233ENST00000522052 DHRS4L2Q6PKH6 230 aa2.31□□□□□ -2.04
CTNNA1-233ENST00000522052 C12orf45Q8N5I9 185 aaPredicted RBP2.31□□□□□ -2.04
CTNNA1-233ENST00000522052 RPP25LQ8N5L8 163 aaKnown RBP2.31□□□□□ -2.04
CTNNA1-233ENST00000522052 CCDC90BQ9GZT6 254 aa2.31□□□□□ -2.04
CTNNA1-233ENST00000522052 ENY2Q9NPA8 101 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms