RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 MIR17HGQ75NE6 70 aa18.22■□□□□ 0.51
PVT1-212ENST00000521951 TCF24Q7RTU0 167 aa18.22■□□□□ 0.51
PVT1-212ENST00000521951 MRPL32Q9BYC8 188 aaKnown RBP18.22■□□□□ 0.51
PVT1-212ENST00000521951 FUT9Q9Y231 359 aa18.22■□□□□ 0.51
PVT1-212ENST00000521951 WIPF1O43516 503 aa18.21■□□□□ 0.51
PVT1-212ENST00000521951 FAM122CQ6P4D5 195 aa18.21■□□□□ 0.51
PVT1-212ENST00000521951 RPP25LQ8N5L8 163 aaKnown RBP18.21■□□□□ 0.51
PVT1-212ENST00000521951 GPR61Q9BZJ8 451 aa18.21■□□□□ 0.51
PVT1-212ENST00000521951 IZUMO1RA6ND01 250 aa18.2■□□□□ 0.5
PVT1-212ENST00000521951 TMEM61Q8N0U2 210 aa18.2■□□□□ 0.5
PVT1-212ENST00000521951 RNF24Q9Y225 148 aa18.2■□□□□ 0.5
PVT1-212ENST00000521951 CD5P06127 495 aa18.19■□□□□ 0.5
PVT1-212ENST00000521951 EIF5AL1Q6IS14 154 aaKnown RBP18.19■□□□□ 0.5
PVT1-212ENST00000521951 SIGLEC15Q6ZMC9 328 aa18.19■□□□□ 0.5
PVT1-212ENST00000521951 OR2K2Q8NGT1 345 aa18.19■□□□□ 0.5
PVT1-212ENST00000521951 A0A1W2PPV4 95 aa18.18■□□□□ 0.5
PVT1-212ENST00000521951 RBPMS2Q6ZRY4 209 aaKnown RBP18.18■□□□□ 0.5
PVT1-212ENST00000521951 GPR82Q96P67 336 aa18.18■□□□□ 0.5
PVT1-212ENST00000521951 TRAV25A0A0B4J276 109 aa18.18■□□□□ 0.5
PVT1-212ENST00000521951 HELTA6NFD8 242 aa18.18■□□□□ 0.5
PVT1-212ENST00000521951 EIF3GO75821 320 aaKnown RBP eCLIP18.18■□□□□ 0.5
PVT1-212ENST00000521951 RPL11P62913 178 aaKnown RBP18.18■□□□□ 0.5
PVT1-212ENST00000521951 FAM167A-AS1Q96KT0 104 aa18.18■□□□□ 0.5
PVT1-212ENST00000521951 SMAD5-AS1Q9Y6J3 95 aa18.18■□□□□ 0.5
PVT1-212ENST00000521951 IGKV3-7A0A075B6H7 116 aa18.17■□□□□ 0.5
PVT1-212ENST00000521951 UMAD1C9J7I0 102 aa18.17■□□□□ 0.5
PVT1-212ENST00000521951 MRPS12O15235 138 aaKnown RBP18.17■□□□□ 0.5
PVT1-212ENST00000521951 RPL7P18124 248 aaKnown RBP18.17■□□□□ 0.5
PVT1-212ENST00000521951 CDC34P49427 236 aaPredicted RBP18.17■□□□□ 0.5
PVT1-212ENST00000521951 SLC25A2Q9BXI2 301 aa18.17■□□□□ 0.5
PVT1-212ENST00000521951 ACTR3CQ9C0K3 210 aaPredicted RBP18.17■□□□□ 0.5
PVT1-212ENST00000521951 G3V4G9 280 aa18.16■□□□□ 0.5
PVT1-212ENST00000521951 TSPAN4O14817 238 aa18.16■□□□□ 0.5
PVT1-212ENST00000521951 GALR1P47211 349 aa18.16■□□□□ 0.5
PVT1-212ENST00000521951 SAMD5Q5TGI4 173 aa18.16■□□□□ 0.5
PVT1-212ENST00000521951 LCN12Q6JVE5 192 aa18.16■□□□□ 0.5
PVT1-212ENST00000521951 BPIFA4PQ86YQ2 179 aa18.16■□□□□ 0.5
PVT1-212ENST00000521951 RAB24Q969Q5 203 aa18.16■□□□□ 0.5
PVT1-212ENST00000521951 MGAM2Q2M2H8 2515 aa18.15■□□□□ 0.5
PVT1-212ENST00000521951 SORL1Q92673 2214 aa18.15■□□□□ 0.5
PVT1-212ENST00000521951 ZNF785A8K8V0 405 aa18.15■□□□□ 0.5
PVT1-212ENST00000521951 ZNF726P1Q15940 193 aa18.15■□□□□ 0.5
PVT1-212ENST00000521951 GBGT1Q8N5D6 347 aa18.15■□□□□ 0.5
PVT1-212ENST00000521951 PHYHIPLQ96FC7 376 aa18.15■□□□□ 0.5
PVT1-212ENST00000521951 HMGB3O15347 200 aaKnown RBP18.14■□□□□ 0.49
PVT1-212ENST00000521951 FHITP49789 147 aa18.14■□□□□ 0.49
PVT1-212ENST00000521951 SSX7Q7RTT5 188 aa18.14■□□□□ 0.49
PVT1-212ENST00000521951 C17orf77Q96MU5 243 aa18.14■□□□□ 0.49
PVT1-212ENST00000521951 MS4A6AQ9H2W1 248 aa18.14■□□□□ 0.49
PVT1-212ENST00000521951 GP9P14770 177 aa18.13■□□□□ 0.49
PVT1-212ENST00000521951 TAS2R45P59539 299 aa18.13■□□□□ 0.49
PVT1-212ENST00000521951 GUCA2BQ16661 112 aa18.13■□□□□ 0.49
PVT1-212ENST00000521951 ALKAL2Q6UX46 152 aa18.13■□□□□ 0.49
PVT1-212ENST00000521951 STXBP6Q8NFX7 210 aa18.13■□□□□ 0.49
PVT1-212ENST00000521951 TMEM14CQ9P0S9 112 aa18.13■□□□□ 0.49
PVT1-212ENST00000521951 CTXND1A0A1B0GTU2 59 aa18.13■□□□□ 0.49
PVT1-212ENST00000521951 PYYP10082 97 aa18.13■□□□□ 0.49
PVT1-212ENST00000521951 SULT1A2P50226 295 aa18.13■□□□□ 0.49
PVT1-212ENST00000521951 KHDC3LQ587J8 217 aa18.13■□□□□ 0.49
PVT1-212ENST00000521951 ZNF503Q96F45 646 aa18.13■□□□□ 0.49
PVT1-212ENST00000521951 SPAG8Q99932 426 aaPredicted RBP18.13■□□□□ 0.49
PVT1-212ENST00000521951 OR51M1Q9H341 326 aa18.13■□□□□ 0.49
PVT1-212ENST00000521951 STAG3L2P0CL84 134 aa18.12■□□□□ 0.49
PVT1-212ENST00000521951 STAG3L3P0CL85 134 aa18.12■□□□□ 0.49
PVT1-212ENST00000521951 ATF4P18848 351 aaPredicted RBP18.12■□□□□ 0.49
PVT1-212ENST00000521951 TFPI2P48307 235 aa18.12■□□□□ 0.49
PVT1-212ENST00000521951 PAFAH1B2P68402 229 aa18.12■□□□□ 0.49
PVT1-212ENST00000521951 FAM74A1Q5RGS3 127 aa18.12■□□□□ 0.49
PVT1-212ENST00000521951 DPPA3Q6W0C5 159 aa18.12■□□□□ 0.49
PVT1-212ENST00000521951 WFDC3Q8IUB2 231 aa18.12■□□□□ 0.49
PVT1-212ENST00000521951 FAM213BQ8TBF2 198 aa18.12■□□□□ 0.49
PVT1-212ENST00000521951 PAXXQ9BUH6 204 aa18.12■□□□□ 0.49
PVT1-212ENST00000521951 NRN1Q9NPD7 142 aa18.12■□□□□ 0.49
PVT1-212ENST00000521951 DNASE2O00115 360 aaPredicted RBP18.11■□□□□ 0.49
PVT1-212ENST00000521951 OR7C2O60412 319 aa18.11■□□□□ 0.49
PVT1-212ENST00000521951 SNRPCP09234 159 aaKnown RBP18.11■□□□□ 0.49
PVT1-212ENST00000521951 IGLC2P0DOY2 106 aa18.11■□□□□ 0.49
PVT1-212ENST00000521951 RAB5CP51148 216 aa18.11■□□□□ 0.49
PVT1-212ENST00000521951 EGFEM1PQ0D2K5 195 aa18.11■□□□□ 0.49
PVT1-212ENST00000521951 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.11■□□□□ 0.49
PVT1-212ENST00000521951 A0A087X0K7 114 aa18.1■□□□□ 0.49
PVT1-212ENST00000521951 H3BQ15 152 aa18.1■□□□□ 0.49
PVT1-212ENST00000521951 DCANP1Q8TF63 244 aa18.1■□□□□ 0.49
PVT1-212ENST00000521951 ZNF256Q9Y2P7 627 aaPredicted RBP18.1■□□□□ 0.49
PVT1-212ENST00000521951 HIST1H1EP10412 219 aaKnown RBP18.09■□□□□ 0.49
PVT1-212ENST00000521951 KRTAP10-11P60412 298 aa18.09■□□□□ 0.49
PVT1-212ENST00000521951 PQLC2Q6ZP29 291 aa18.09■□□□□ 0.49
PVT1-212ENST00000521951 RNF141Q8WVD5 230 aa18.09■□□□□ 0.49
PVT1-212ENST00000521951 HRH4Q9H3N8 390 aa18.09■□□□□ 0.49
PVT1-212ENST00000521951 ZNF586Q9NXT0 402 aa18.09■□□□□ 0.49
PVT1-212ENST00000521951 TRAV2A0A0B4J234 112 aa18.08■□□□□ 0.49
PVT1-212ENST00000521951 H3BTX0 84 aa18.08■□□□□ 0.49
PVT1-212ENST00000521951 K7EQG2 157 aa18.08■□□□□ 0.49
PVT1-212ENST00000521951 OR10J4P0C629 311 aa18.08■□□□□ 0.49
PVT1-212ENST00000521951 ARL14EPLP0DKL9 152 aa18.08■□□□□ 0.49
PVT1-212ENST00000521951 BEAN1Q3B7T3 259 aa18.08■□□□□ 0.49
PVT1-212ENST00000521951 TEX261Q6UWH6 196 aa18.08■□□□□ 0.49
PVT1-212ENST00000521951 LCN15Q6UWW0 184 aa18.08■□□□□ 0.49
PVT1-212ENST00000521951 FXYD5Q96DB9 178 aa18.08■□□□□ 0.49
PVT1-212ENST00000521951 OR4C46A6NHA9 309 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms