RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 CREBBPQ92793 2442 aa13.23□□□□□ -0.29
USP42-207ENST00000521713 SPSB3Q6PJ21 355 aa13.23□□□□□ -0.29
USP42-207ENST00000521713 TMEM14EPQ6UXP3 125 aa13.23□□□□□ -0.29
USP42-207ENST00000521713 RPP25LQ8N5L8 163 aaKnown RBP13.23□□□□□ -0.29
USP42-207ENST00000521713 FRMPD3Q5JV73 1810 aa13.23□□□□□ -0.29
USP42-207ENST00000521713 M0R381 172 aa13.22□□□□□ -0.29
USP42-207ENST00000521713 SRD5A1P18405 259 aa13.22□□□□□ -0.29
USP42-207ENST00000521713 PLNP26678 52 aa13.22□□□□□ -0.29
USP42-207ENST00000521713 Q8TCH9 128 aa13.22□□□□□ -0.29
USP42-207ENST00000521713 TMEM95Q3KNT9 176 aa13.22□□□□□ -0.29
USP42-207ENST00000521713 VOPP1Q96AW1 172 aa13.22□□□□□ -0.29
USP42-207ENST00000521713 LINC00527Q9UJ94 153 aa13.22□□□□□ -0.29
USP42-207ENST00000521713 FAM215AQ9Y5M1 114 aa13.22□□□□□ -0.29
USP42-207ENST00000521713 LYPD2Q6UXB3 125 aa13.22□□□□□ -0.29
USP42-207ENST00000521713 MBNL3Q9NUK0 354 aaKnown RBP13.22□□□□□ -0.29
USP42-207ENST00000521713 IGHV2-5P01817 119 aa13.22□□□□□ -0.29
USP42-207ENST00000521713 MAJINQ3KP22 176 aa13.22□□□□□ -0.29
USP42-207ENST00000521713 GGTLC1Q9BX51 225 aa13.22□□□□□ -0.29
USP42-207ENST00000521713 TNFRSF18Q9Y5U5 241 aa13.22□□□□□ -0.29
USP42-207ENST00000521713 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.22□□□□□ -0.293e-15■■■■■ 56.9
USP42-207ENST00000521713 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.21□□□□□ -0.29
USP42-207ENST00000521713 RBMY1BA6NDE4 496 aaKnown RBP13.21□□□□□ -0.29
USP42-207ENST00000521713 RBMY1EA6NEQ0 496 aaKnown RBP13.21□□□□□ -0.29
USP42-207ENST00000521713 CD55P08174 381 aa13.21□□□□□ -0.29
USP42-207ENST00000521713 RBMY1DP0C7P1 496 aaKnown RBP13.21□□□□□ -0.29
USP42-207ENST00000521713 RBMY1A1P0DJD3 496 aaKnown RBP13.21□□□□□ -0.29
USP42-207ENST00000521713 RBMY1CP0DJD4 496 aa13.21□□□□□ -0.29
USP42-207ENST00000521713 MST1LQ2TV78 715 aa13.21□□□□□ -0.29
USP42-207ENST00000521713 OCIAD2Q56VL3 154 aa13.21□□□□□ -0.29
USP42-207ENST00000521713 H0YJW9 148 aa13.21□□□□□ -0.29
USP42-207ENST00000521713 SYS1-DBNDD2H3BUS1 97 aa13.21□□□□□ -0.29
USP42-207ENST00000521713 C15orf32Q32M92 178 aa13.21□□□□□ -0.29
USP42-207ENST00000521713 FAM90A2PQ658T7 463 aa13.21□□□□□ -0.29
USP42-207ENST00000521713 TREML4Q6UXN2 200 aa13.21□□□□□ -0.29
USP42-207ENST00000521713 BCL6BQ8N143 479 aaPredicted RBP13.21□□□□□ -0.29
USP42-207ENST00000521713 C11orf44Q8N8P7 122 aa13.21□□□□□ -0.29
USP42-207ENST00000521713 OR13C6PQ8NH95 151 aa13.21□□□□□ -0.29
USP42-207ENST00000521713 PSG8Q9UQ74 426 aa13.21□□□□□ -0.29
USP42-207ENST00000521713 FAM208BQ5VWN6 2430 aa13.21□□□□□ -0.29
USP42-207ENST00000521713 ZNF815PA8K554 130 aa13.21□□□□□ -0.29
USP42-207ENST00000521713 DLX4Q92988 240 aaPredicted RBP13.21□□□□□ -0.29
USP42-207ENST00000521713 SNHG12Q9BXW3 62 aa13.21□□□□□ -0.29
USP42-207ENST00000521713 CHTOPQ9Y3Y2 248 aaKnown RBP13.21□□□□□ -0.29
USP42-207ENST00000521713 WNK2Q9Y3S1 2297 aa13.2□□□□□ -0.3
USP42-207ENST00000521713 RNF223E7ERA6 249 aa13.2□□□□□ -0.3
USP42-207ENST00000521713 ATXN8Q156A1 80 aa13.2□□□□□ -0.3
USP42-207ENST00000521713 TMEM249Q2WGJ8 235 aa13.2□□□□□ -0.3
USP42-207ENST00000521713 NSUN5P1Q3KNT7 163 aa13.2□□□□□ -0.3
USP42-207ENST00000521713 C10orf55Q5SWW7 151 aa13.2□□□□□ -0.3
USP42-207ENST00000521713 SSBP2P81877 361 aaPredicted RBP13.2□□□□□ -0.3
USP42-207ENST00000521713 QRFPP83859 136 aa13.2□□□□□ -0.3
USP42-207ENST00000521713 KIR3DL3Q8N743 410 aa13.2□□□□□ -0.3
USP42-207ENST00000521713 POLR3KQ9Y2Y1 108 aaPredicted RBP13.2□□□□□ -0.3
USP42-207ENST00000521713 RNASE1P07998 156 aaKnown RBP13.2□□□□□ -0.3
USP42-207ENST00000521713 PSG1P11464 419 aa13.2□□□□□ -0.3
USP42-207ENST00000521713 C11orf68Q9H3H3 251 aaKnown RBP13.2□□□□□ -0.3
USP42-207ENST00000521713 MMP23AO75900 390 aa13.2□□□□□ -0.3
USP42-207ENST00000521713 GTSCR1Q86UQ5 136 aa13.2□□□□□ -0.3
USP42-207ENST00000521713 TMEM101Q96IK0 257 aa13.2□□□□□ -0.3
USP42-207ENST00000521713 USMG5Q96IX5 58 aa13.2□□□□□ -0.3
USP42-207ENST00000521713 ERG28Q9UKR5 140 aa13.2□□□□□ -0.3
USP42-207ENST00000521713 GUSBP1Q15486 140 aa13.19□□□□□ -0.3
USP42-207ENST00000521713 IGFL2Q6UWQ7 119 aa13.19□□□□□ -0.3
USP42-207ENST00000521713 RNF182Q8N6D2 247 aa13.19□□□□□ -0.3
USP42-207ENST00000521713 NUP210Q8TEM1 1887 aaPredicted RBP13.19□□□□□ -0.3
USP42-207ENST00000521713 GNG5P63218 68 aa13.19□□□□□ -0.3
USP42-207ENST00000521713 CST9LQ9H4G1 147 aa13.19□□□□□ -0.3
USP42-207ENST00000521713 A0A1B0GWJ7 208 aa13.19□□□□□ -0.3
USP42-207ENST00000521713 IGLV1-44P01699 117 aa13.19□□□□□ -0.3
USP42-207ENST00000521713 SAA4P35542 130 aa13.19□□□□□ -0.3
USP42-207ENST00000521713 KLF17Q5JT82 389 aaPredicted RBP13.19□□□□□ -0.3
USP42-207ENST00000521713 IFI27P40305 119 aaPredicted RBP13.18□□□□□ -0.3
USP42-207ENST00000521713 UBE2E1P51965 193 aa13.18□□□□□ -0.3
USP42-207ENST00000521713 SPANXDQ9BXN6 97 aa13.18□□□□□ -0.3
USP42-207ENST00000521713 DOCK7Q96N67 2140 aa13.18□□□□□ -0.3
USP42-207ENST00000521713 TRGV2A0A075B6R0 118 aa13.18□□□□□ -0.3
USP42-207ENST00000521713 CNTFRP26992 372 aa13.18□□□□□ -0.3
USP42-207ENST00000521713 KIR3DS1Q14943 382 aa13.18□□□□□ -0.3
USP42-207ENST00000521713 SIGLEC9Q9Y336 463 aa13.18□□□□□ -0.3
USP42-207ENST00000521713 TECTAO75443 2155 aa13.18□□□□□ -0.3
USP42-207ENST00000521713 OVOL1O14753 267 aa13.18□□□□□ -0.3
USP42-207ENST00000521713 GTSF1LQ9H1H1 148 aa13.18□□□□□ -0.3
USP42-207ENST00000521713 FANCMQ8IYD8 2048 aa13.18□□□□□ -0.3
USP42-207ENST00000521713 FER1L5A0AVI2 2057 aa13.18□□□□□ -0.3
USP42-207ENST00000521713 RNASE4P34096 147 aaKnown RBP13.18□□□□□ -0.3
USP42-207ENST00000521713 TRBV7-1A0A0A6YYK4 115 aa13.17□□□□□ -0.3
USP42-207ENST00000521713 PHF3Q92576 2039 aaKnown RBP13.17□□□□□ -0.3
USP42-207ENST00000521713 TMEM238C9JI98 176 aa13.17□□□□□ -0.3
USP42-207ENST00000521713 LMO1P25800 156 aa13.17□□□□□ -0.3
USP42-207ENST00000521713 MGST2Q99735 147 aa13.17□□□□□ -0.3
USP42-207ENST00000521713 MPDZO75970 2070 aa13.17□□□□□ -0.3
USP42-207ENST00000521713 SRSF8Q9BRL6 282 aaKnown RBP13.17□□□□□ -0.3
USP42-207ENST00000521713 TRAV21A0A0B4J279 112 aa13.16□□□□□ -0.3
USP42-207ENST00000521713 TRBV7-9A0A0J9YWB2 115 aa13.16□□□□□ -0.3
USP42-207ENST00000521713 PFN1P07737 140 aaKnown RBP13.16□□□□□ -0.3
USP42-207ENST00000521713 RNF114Q9Y508 228 aa13.16□□□□□ -0.3
USP42-207ENST00000521713 SCN8AQ9UQD0 1980 aa13.16□□□□□ -0.3
USP42-207ENST00000521713 TRAV5A0A0B4J249 113 aa13.16□□□□□ -0.3
USP42-207ENST00000521713 ACACBO00763 2458 aa13.16□□□□□ -0.3
USP42-207ENST00000521713 PYYP10082 97 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms