RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 MEIS3P1A6NDR6 274 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 TMEM235A6NFC5 223 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 C17orf51A8MQB3 221 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 K7EQS6 105 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 GPR31O00270 319 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 ATG12O94817 140 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 NSA2O95478 260 aaKnown RBP1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 IGLV3-19P01714 112 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 CD3DP04234 171 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 ISG15P05161 165 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 CRHP06850 196 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 P0C880 135 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 HSD11B1P28845 292 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 S100A2P29034 98 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 RPS27P42677 84 aaKnown RBP1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 CAPZBP47756 277 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 B2MP61769 119 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 DCDP81605 110 aaKnown RBP1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 EIF3IQ13347 325 aaKnown RBP1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 PPP1R1AQ13522 171 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 EBPQ15125 230 aaKnown RBP1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 OR8G1Q15617 311 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 TMPPEQ6ZT21 453 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 SCXQ7RTU7 201 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 LHFPL1Q86WI0 220 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 OOSP2Q86WS3 158 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 LYPD1Q8N2G4 141 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 ZFAND2AQ8N6M9 145 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 ZNF676Q8N7Q3 588 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 LINC00304Q8N9R0 145 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 SLC30A7Q8NEW0 376 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 OR51D1Q8NGF3 324 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 OR51A2Q8NGJ7 313 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 OR10K1Q8NGX5 313 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 PPP1R1CQ8WVI7 109 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 ASB17Q8WXJ9 295 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 ARL11Q969Q4 196 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 PRRT1Q99946 306 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 SLC25A21Q9BQT8 299 aaPredicted RBP1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 UPK3BQ9BT76 320 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 ULBP3Q9BZM4 244 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 NMES1Q9C002 83 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 CHST6Q9GZX3 395 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 CST11Q9H112 138 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 GTSF1LQ9H1H1 148 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 TCEAL2Q9H3H9 227 aaPredicted RBP1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 TMEM138Q9NPI0 162 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 PRTFDC1Q9NRG1 225 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 ASF1BQ9NVP2 202 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 FAM206AQ9NX38 181 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 SLC22A13Q9Y226 551 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 NOP16Q9Y3C1 178 aaKnown RBP1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 MMACHCQ9Y4U1 282 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 TRAPPC1Q9Y5R8 145 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 R4GMQ9 66 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 DSCAMO60469 2012 aa1.69□□□□□ -2.14
HMGN1P28-201ENST00000521340 IGKV1D-43A0A0B4J1Z2 117 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 PQLC2LA1A4F0 135 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 TMEM218A2RU14 115 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 C9orf170A2RU37 121 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 TLCD2A6NGC4 264 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 OR5K4A6NMS3 321 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 TMEM14DPA8MWL7 114 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 ZNF736B4DX44 427 aaPredicted RBP1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 GGTLC3B5MD39 225 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 DISC1C4P0D8 188 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 H3BSH0 61 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 CYB5AP00167 134 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 IGLV3-1P01715 115 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 APOC3P02656 99 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 TTRP02766 147 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 IFNA4P05014 189 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 CD2P06729 351 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 SMIM6P0DI80 62 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 CD79AP11912 226 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 TPT1P13693 172 aaKnown RBP1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 CCL1P22362 96 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 PSMB3P49720 205 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 POLR2HP52434 150 aaKnown RBP1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 FGF12P61328 243 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 SUPT4H1P63272 117 aaKnown RBP1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 BTG2P78543 158 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 S100A12P80511 92 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 SMAGPQ0VAQ4 97 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 CLEC12BQ2HXU8 276 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 DEFB115Q30KQ5 88 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 RNASE10Q5GAN6 216 aaKnown RBP1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 CLVS2Q5SYC1 327 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 C1orf140Q5VVS0 124 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 AMMECR1LQ6DCA0 310 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 C3orf33Q6P1S2 294 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 C5orf46Q6UWT4 87 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 TCF23Q7RTU1 214 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 GRINAQ7Z429 371 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 TMED4Q7Z7H5 227 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 TRAPPC6BQ86SZ2 158 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 OR5AS1Q8N127 324 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 SVBPQ8N300 66 aa1.68□□□□□ -2.14
HMGN1P28-201ENST00000521340 ZNF664Q8N3J9 261 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms