RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 CD5P06127 495 aa9.19□□□□□ -0.94
CLK4-208ENST00000520957 RBMY1DP0C7P1 496 aaKnown RBP9.19□□□□□ -0.94
CLK4-208ENST00000520957 ZNF688P0C7X2 276 aa9.19□□□□□ -0.94
CLK4-208ENST00000520957 DEFB131AP59861 70 aa9.19□□□□□ -0.94
CLK4-208ENST00000520957 CD300CQ08708 224 aa9.19□□□□□ -0.94
CLK4-208ENST00000520957 C10orf113Q5VZT2 155 aa9.19□□□□□ -0.94
CLK4-208ENST00000520957 TUBA4BQ9H853 241 aa9.19□□□□□ -0.94
CLK4-208ENST00000520957 SRD5A3Q9H8P0 318 aa9.19□□□□□ -0.94
CLK4-208ENST00000520957 MAP6D1Q9H9H5 199 aa9.19□□□□□ -0.94
CLK4-208ENST00000520957 NRN1Q9NPD7 142 aa9.19□□□□□ -0.94
CLK4-208ENST00000520957 PFDN2Q9UHV9 154 aa9.19□□□□□ -0.94
CLK4-208ENST00000520957 IFNA5P01569 189 aa9.18□□□□□ -0.94
CLK4-208ENST00000520957 NUP62P37198 522 aaPredicted RBP9.18□□□□□ -0.94
CLK4-208ENST00000520957 DEFB1P60022 68 aa9.18□□□□□ -0.94
CLK4-208ENST00000520957 SPATA31B1PQ5VZV4 182 aa9.18□□□□□ -0.94
CLK4-208ENST00000520957 SEPSECSQ9HD40 501 aaKnown RBP9.18□□□□□ -0.94
CLK4-208ENST00000520957 ELOA3CA0A087WX78 387 aaPredicted RBP9.17□□□□□ -0.94
CLK4-208ENST00000520957 MRPS12O15235 138 aaKnown RBP9.17□□□□□ -0.94
CLK4-208ENST00000520957 EIF3GO75821 320 aaKnown RBP eCLIP9.17□□□□□ -0.94
CLK4-208ENST00000520957 PRB4P10163 310 aaPredicted RBP9.17□□□□□ -0.94
CLK4-208ENST00000520957 PXDC1Q5TGL8 231 aa9.17□□□□□ -0.94
CLK4-208ENST00000520957 IGFL4Q6B9Z1 124 aa9.17□□□□□ -0.94
CLK4-208ENST00000520957 RPL7L1Q6DKI1 246 aaKnown RBP9.17□□□□□ -0.94
CLK4-208ENST00000520957 LINC00322Q6ZN03 302 aaPredicted RBP9.17□□□□□ -0.94
CLK4-208ENST00000520957 ZNF709Q8N972 641 aa9.17□□□□□ -0.94
CLK4-208ENST00000520957 SCGB1C1Q8TD33 95 aa9.17□□□□□ -0.94
CLK4-208ENST00000520957 MFFQ9GZY8 342 aa9.17□□□□□ -0.94
CLK4-208ENST00000520957 A8MZ25 164 aa9.16□□□□□ -0.94
CLK4-208ENST00000520957 H3BTX0 84 aa9.16□□□□□ -0.94
CLK4-208ENST00000520957 SOCS3O14543 225 aa9.16□□□□□ -0.94
CLK4-208ENST00000520957 HSD17B11Q8NBQ5 300 aa9.16□□□□□ -0.94
CLK4-208ENST00000520957 B9D2Q9BPU9 175 aa9.16□□□□□ -0.94
CLK4-208ENST00000520957 TENM3Q9P273 2699 aa9.16□□□□□ -0.94
CLK4-208ENST00000520957 HUWE1Q7Z6Z7 4374 aaKnown RBP9.16□□□□□ -0.94
CLK4-208ENST00000520957 TRAV2A0A0B4J234 112 aa9.16□□□□□ -0.94
CLK4-208ENST00000520957 KNCNA6PVL3 124 aa9.16□□□□□ -0.94
CLK4-208ENST00000520957 CXCL2P19875 107 aa9.16□□□□□ -0.94
CLK4-208ENST00000520957 PSMG4Q5JS54 123 aa9.16□□□□□ -0.94
CLK4-208ENST00000520957 FFAR4Q5NUL3 377 aa9.16□□□□□ -0.94
CLK4-208ENST00000520957 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.16□□□□□ -0.94
CLK4-208ENST00000520957 LINC00052Q96N35 136 aa9.16□□□□□ -0.94
CLK4-208ENST00000520957 SH3BGRL3Q9H299 93 aa9.16□□□□□ -0.94
CLK4-208ENST00000520957 CYTL1Q9NRR1 136 aa9.16□□□□□ -0.94
CLK4-208ENST00000520957 H3BQ15 152 aa9.15□□□□□ -0.94
CLK4-208ENST00000520957 RPL35AP18077 110 aaKnown RBP9.15□□□□□ -0.94
CLK4-208ENST00000520957 GALR1P47211 349 aa9.15□□□□□ -0.94
CLK4-208ENST00000520957 HAGHQ16775 308 aa9.15□□□□□ -0.94
CLK4-208ENST00000520957 FAM78BQ5VT40 261 aa9.15□□□□□ -0.94
CLK4-208ENST00000520957 MIR17HGQ75NE6 70 aa9.15□□□□□ -0.94
CLK4-208ENST00000520957 OR1L4Q8NGR5 311 aa9.15□□□□□ -0.94
CLK4-208ENST00000520957 GATAD1Q8WUU5 269 aa9.15□□□□□ -0.94
CLK4-208ENST00000520957 C20orf173Q96LM9 149 aa9.15□□□□□ -0.94
CLK4-208ENST00000520957 FAM110AQ9BQ89 295 aa9.15□□□□□ -0.94
CLK4-208ENST00000520957 PARD6GQ9BYG4 376 aaPredicted RBP9.15□□□□□ -0.94
CLK4-208ENST00000520957 TRAV8-2A0A0B4J237 113 aa9.14□□□□□ -0.95
CLK4-208ENST00000520957 C17orf112F2Z3M2 114 aa9.14□□□□□ -0.95
CLK4-208ENST00000520957 RPL7P18124 248 aaKnown RBP9.14□□□□□ -0.95
CLK4-208ENST00000520957 ATP6V0CP27449 155 aa9.14□□□□□ -0.95
CLK4-208ENST00000520957 HLA-DMBP28068 263 aa9.14□□□□□ -0.95
CLK4-208ENST00000520957 RNF182Q8N6D2 247 aa9.14□□□□□ -0.95
CLK4-208ENST00000520957 PFDN5Q99471 154 aa9.14□□□□□ -0.95
CLK4-208ENST00000520957 HMSDA8MTL9 139 aa9.13□□□□□ -0.95
CLK4-208ENST00000520957 RAB2AP61019 212 aa9.13□□□□□ -0.95
CLK4-208ENST00000520957 ZNF266Q14584 549 aa9.13□□□□□ -0.95
CLK4-208ENST00000520957 GDF5OSQ5U4N7 250 aa9.13□□□□□ -0.95
CLK4-208ENST00000520957 TCTE3Q8IZS6 198 aa9.13□□□□□ -0.95
CLK4-208ENST00000520957 FAM167A-AS1Q96KT0 104 aa9.13□□□□□ -0.95
CLK4-208ENST00000520957 GPR82Q96P67 336 aa9.13□□□□□ -0.95
CLK4-208ENST00000520957 SLC25A2Q9BXI2 301 aa9.13□□□□□ -0.95
CLK4-208ENST00000520957 F6UB75 175 aa9.13□□□□□ -0.95
CLK4-208ENST00000520957 PYYP10082 97 aa9.13□□□□□ -0.95
CLK4-208ENST00000520957 ATF4P18848 351 aaPredicted RBP9.13□□□□□ -0.95
CLK4-208ENST00000520957 ACTL10Q5JWF8 245 aa9.13□□□□□ -0.95
CLK4-208ENST00000520957 BPIFA4PQ86YQ2 179 aa9.13□□□□□ -0.95
CLK4-208ENST00000520957 KCNRGQ8N5I3 272 aa9.13□□□□□ -0.95
CLK4-208ENST00000520957 C16orf92Q96LL3 132 aa9.13□□□□□ -0.95
CLK4-208ENST00000520957 LOC102724200A0A096LPH7 203 aaPredicted RBP9.12□□□□□ -0.95
CLK4-208ENST00000520957 SLC17A3O00476 420 aa9.12□□□□□ -0.95
CLK4-208ENST00000520957 IGLC2P0DOY2 106 aa9.12□□□□□ -0.95
CLK4-208ENST00000520957 S100A7P31151 101 aa9.12□□□□□ -0.95
CLK4-208ENST00000520957 CMC4P56277 68 aaPredicted RBP9.12□□□□□ -0.95
CLK4-208ENST00000520957 SNRPD3P62318 126 aaKnown RBP9.12□□□□□ -0.95
CLK4-208ENST00000520957 LCE2DQ5TA82 110 aaPredicted RBP9.12□□□□□ -0.95
CLK4-208ENST00000520957 S100A7AQ86SG5 101 aa9.12□□□□□ -0.95
CLK4-208ENST00000520957 AKAP14Q86UN6 197 aa9.12□□□□□ -0.95
CLK4-208ENST00000520957 RETNQ9HD89 108 aa9.12□□□□□ -0.95
CLK4-208ENST00000520957 ZNF586Q9NXT0 402 aa9.12□□□□□ -0.95
CLK4-208ENST00000520957 STAB2Q8WWQ8 2551 aa9.12□□□□□ -0.95
CLK4-208ENST00000520957 ISLRO14498 428 aa9.11□□□□□ -0.95
CLK4-208ENST00000520957 HMGB3O15347 200 aaKnown RBP9.11□□□□□ -0.95
CLK4-208ENST00000520957 ZNF705DP0CH99 300 aaPredicted RBP9.11□□□□□ -0.95
CLK4-208ENST00000520957 ZNF705BP0CI00 300 aaPredicted RBP9.11□□□□□ -0.95
CLK4-208ENST00000520957 LGALSLQ3ZCW2 172 aaPredicted RBP9.11□□□□□ -0.95
CLK4-208ENST00000520957 ZNF503Q96F45 646 aa9.11□□□□□ -0.95
CLK4-208ENST00000520957 KCNIP2Q9NS61 270 aa9.11□□□□□ -0.95
CLK4-208ENST00000520957 FUT9Q9Y231 359 aa9.11□□□□□ -0.95
CLK4-208ENST00000520957 BOLA1Q9Y3E2 137 aa9.11□□□□□ -0.95
CLK4-208ENST00000520957 TIMM9Q9Y5J7 89 aa9.11□□□□□ -0.95
CLK4-208ENST00000520957 A0A087X0K7 114 aa9.1□□□□□ -0.95
CLK4-208ENST00000520957 OR10J4P0C629 311 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms